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Analysis of chicken QTL by using DNA markers and chromosome map

Research Project

Project/Area Number 10306017
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied animal science
Research InstitutionHIROSHIMA UNIVERSITY

Principal Investigator

YAMAMOTO Yoshio  Hiroshima University, Faculty of Applied Biological Science, Professor, 生物生産学部, 教授 (10032103)

Co-Investigator(Kenkyū-buntansha) FURUSAWA Shuuichi  Hiroshima University, Faculty of Applied Biological Science, Associate Professor, 生物生産学部, 助教授 (80130037)
MATSUDA Youichi  Hokkaido University, Graduate School of Science, Professor, 大学院・理学研究科, 教授 (70165835)
MATSUDA Haruo  Hiroshima University, Faculty of Applied Biological Science, Professor, 生物生産学部, 教授 (80116863)
TAKAHASHI Hideaki  National Institute of Agrobiological Resources, Senior Researcher, 遺伝資源第1, 研究官
TSUDZUKI Masaoki  Hiroshima University, Faculty of Applied Biological Science, Associate Professor, 生物生産学部, 助教授 (70212058)
Project Period (FY) 1998 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥31,660,000 (Direct Cost: ¥29,800,000、Indirect Cost: ¥1,860,000)
Fiscal Year 2001: ¥8,060,000 (Direct Cost: ¥6,200,000、Indirect Cost: ¥1,860,000)
Fiscal Year 2000: ¥7,700,000 (Direct Cost: ¥7,700,000)
Fiscal Year 1999: ¥8,300,000 (Direct Cost: ¥8,300,000)
Fiscal Year 1998: ¥7,600,000 (Direct Cost: ¥7,600,000)
Keywordschicken / QTL / DNA marker / linkage analysis / chromosome map / reference family / QTR
Research Abstract

[Establishment of reference family for QTL analysis and characterize the economical traits of chicken lines] : 2,930 individuals of F2 generation were established from Oh-shamo and White Leghorn mating. As the economical traits, body weight, shank length, egg production, egg weight, meat color, crude fat, crude protein, amino acid, pH, and myoglobin were measured. [Development of DNA markers and its typing] : Eighty functional genes were mapped on chromosome map by using direct R-banding FISH method. No.1, 2, 4, and 5 of chicken chromosomes had high homology with human chromosomes. Chicken Z chromosome was found to be high homology with No.5 and 9 of human chromosomes. Out of 800 microsatellite DNA developed, 314 microsatellite DNA were informative in our reference family. [Analysis of immune-associated gene] : Recombinant protein from chicken IL-6 gene was identified and its activity was confirmed. An expression of mRNA of IL-6 gene was confirmed in GST cell line induced by IPTG stimulation.

Report

(5 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] M.Nishibori, et al.: "Utility of three restriction fragment length polymorphism probes for genotyping of the chicken major histocompatibility complex class IV region"Poulyry Science. 79. 305-311 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M.Mishibori, et al.: "Complete sequence of the Japanese quail (Coturnix japonica) mitochondrial genome and Its genetic relationship with related species"Anim.Genet.. 32. 380-385 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M.Mishibori, et al.: "Genetic relationships among genus Gallus based on mitochondorial and genome DNA polymorphisims"In : Proceeding of 27^<th> ISAG. 15 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K.Ogura, et al.: "Cloning and chromosomal mapping of human and chicken iroquois (IRX) genes"Cytogenet.Cell Genet.. 92. 320-325 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Yoshimura, et al.: "Molecular analysis of avian circadian clock genes"Mol.Brain Res.. 78. 207-215 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K.Tanaka, et al.: "Characterization and chromosomal distribution of a novel satellite DNA sequence of Japanese quail (Coturnix coturnix japonica)"J Hered.. 91. 413-415 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M. Nishibori, et al.: "Utility of three restriction fragment length polymorphism probes for genotyping of the chicken major histocompatibility complex class IV region"Poultry Science. 79. 305-311 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M. Nishibori, et al.: "Complete sequence of the Japanese quail (Coturnix japonica) mitochondrial genome and its genetic relationship with related species"Anim. Genet.. 32. 380-385 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M. Nishibori, et al.: "Genetic relationships among genus Gallus based on mitochondorial and genome DNA polymorphisims"In Proceeding of 27^<th> ISAG. 15. (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K. Ogura, et al.: "Cloning and chromosomal mapping of human and chicken iroquois (IRX) genes"Cytogenet. Cell Genet.. 92. 320-325 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T. Yoshimura, et al.: "Molecular analysis of avian circadian clock genes"Mol. Brain Res.. 78. 207-215 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K. Tanaka, et al.: "Characterization and chromosomal distribution of a novel satellite DNA sequence of Japanese quail (Coturnix japonica)"J. Hered.. 91. 413-415 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M.Nishibori et al.: "Utility of three restriction fragment length polymorphism probes for genotyping of the chicken major histocompatibility complex class IV region"Poultry Science. 79. 305-311 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] M.Nishibori et al.: "Complete sequence of the Japanese quail (Coturnix japonica) mitochondrial genome and its genetic relationship with related species"Anim. Genet.. 32. 380-385 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] M.Nishibori et al.: "Genetic relationships among genus Gallus based on mitochondorial and genome DNA polymorphisims"In : Proceeding of 27^<th> ISAG. 15 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] K.Ogura et al.: "Cloning and chromosomal mapping of human and chicken iroquois (IRX) genes"Cytogenet. Cell Genet.. 92. 320-325 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Yoshimura et al.: "Molecular analysis of avian circadian clock genes"Mol. Brain Res.. 78. 207-215 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] K.Tanaka et al.: "Characterization and chromosomal distribution of a novel satellite DNA sequence of Japanese quail (Coturnix coturnix japonica)"J. Hered.. 91. 413-415 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Suzuki et al.,: "Cytogenetic assignment of 29 functional genes to chicken microchromosomes by FISH"Cytogenetics and Cell Genetics. 87. 233-237 (1999)

    • Related Report
      2000 Annual Research Report
  • [Publications] K.Tanaka et al.: "Characterization and chromosomal distribution of a novel satellite DNA sequence of Japanese quail (Coturnix coturnix japonica)"The J.Heredity. 91. 412-415 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 西堀正英,都築政起,山本義雄: "HC Class II遺伝子の多型を用いたニワトリのドメステイケーションの解析"DNA多型. 8. 111-115 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] T.Suzuki,Y.Matsuda et al.: "Cytogenetic mapping of 31 functional genes on chicken chromosomes by direct R-banding FISH"Cytogenetics and Cell Genetics. 87. 32-40 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] H.Takahashi,et al.,: "Genetic relationship among Japanese native breeds of chickens based on・・・・・" J.Heredity. 89. 543-546 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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