• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Phylogenetic analysis of Brassicaceae plants and molecular evolution of self-incompatibility

Research Project

Project/Area Number 10460001
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Breeding science
Research InstitutionTOHOKU UNIVERSITY

Principal Investigator

NISHI Takeshi  Tohoku University, Professor, 大学院・農学研究科, 教授 (30301039)

Co-Investigator(Kenkyū-buntansha) TAKAHATA Yoshihito  Iwate University, Professor, 農学部, 教授 (10133894)
Project Period (FY) 1998 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥9,500,000 (Direct Cost: ¥9,500,000)
Fiscal Year 1999: ¥4,700,000 (Direct Cost: ¥4,700,000)
Fiscal Year 1998: ¥4,800,000 (Direct Cost: ¥4,800,000)
Keywordsfamily Brassicaceae / tribe Brassiceae / phylogenetic analysis / nucleotide sequence / self-incompatibility / S locus complex / evolution / SLR1遺伝子 / SLR1
Research Abstract

Using 19 species of Brassicaceae plants, we determined nucleotide sequences of SLR1 (S-locus related gene 1), rbcL (Large subunit of RuBisCO), and Plastid subtype ID, and compared them for phylogenetic analysis. Analysis of SLR1 showed that Brassica nigra is distantly related to Brassica oleracea and Brassica rapa though they belong to the same genus, and that Erucastrum abyssinicum and Raphanus sativus are more closely related to B. oleracea and B. rapa. Analyses of rbcL and Plastid subtype ID indicated that these species can be separated into two groups, B. rapa/B. oleracea group and Sinapis alba/B. nigra group, and that B. nigra is distantly related to B. oleracea. We are now investigating the intra-specific variation of these genes, and going to calculate the year of speciation of these species.
In the comparison of SLG and SRK genes, which determine the self/non-self recognition specificity of self-incompatibility, highly similar set of alleles among B. oleracea, B. rapa, and B. napus were found. This set of alleles are considered to have been the same allele before the speciation of these three species. SLG alleles of R. sativus did not form a group independent from those of Brassica, indicating that diversification of S locus occurred before the separation of these genus. Analysis of long DNA fragments of S locus suggested that insertion or deletion of DNA fragments occurred in the S locus complex at the time of or after the speciation.

Report

(3 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • Research Products

    (15 results)

All Other

All Publications (15 results)

  • [Publications] Suzuki G.,Watanabe M.,Nishio T.: "Physical distances between S-locus genes in various S haplotypes of Brassica rapa and B.oleracea"Theor.Appl.Genet.. (in press). (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Nishio T.,Kusaba K.: "Sequence diversity of SLG and SRK in Brassica oleracea L."Ann.Bot.. (in press). (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kusabe M.,Matsushita M.,Okazaki K.,Satta Y.,Nishio T.: "Sequence and structural diversity of the S locus genes from different lines with the same self-recognition specificities in Brassica oleracea"Genetics. 154. 413-420 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Okazaki K.,Kusabe M.,Ockendon DJ.,Nishio T.: "Characterization of S tester lines in Brassica oleracea : polymorphism of restriction fragment length of SLG homologues and isoelectric points of S-locus glycoproteins"Theor.Appl.Genet.. 98. 1329-1334 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sakamoto K.,Kusaba M.,Nishio T.: "Polymorphism of the S-locus glycoprotein gene(SLG)and the S-locus related gene(SLR1)in Raphanus sativus L.and self-incompatible ornamental plants in the Brassicaceae"Mo1.Gen.Genet.. 258. 397-403 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Suzuki G, Watanabe M, Nishio T: "Physical distances between S-locus genes in various S haplotypes of Brassica rapa and B. oleracea."Theor. Appl. Genet.. (in press). (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Nishio T, Kusaba K: "Sequence diversity of SLG and SRK in Brassica olerace L."Ann. Bot.. (in press). (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kusaba M, Matsushita M, Okazaki K, Satta Y, Nishio T: "Sequence and structural diversity of the S locus genes from different lines with the same self-recognition specificities in Brassica oleracea"Genetics. 154. 413-420 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Okazaki K, Kusaba M, Ockendon DJ, Nishio T: "Characterization of S tester lines in Brassica oleracea : polymorphism of restriction fragment length of SLG homologues and isoelectric points of S-locus glycoproteins."Theor. Appl. Genet.. 98. 1329-1334 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sakamoto K, Kusaba M, Nishio T: "Polymorphism of the S-locus glycoprotein gene (SLG) and the S-locus related gene (SLR1) in Raphanus sativus L. and self-incompatible ornamental plants in the Brassicaceae."Mol. Gen. Genet.. 258. 397-403 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Suzuki G.,Watanabe M.,Nishio T.: "Physical distances between S-locus genes in various S haplotypes of Brassica rapa and B.Oleracea"Theor.Appl.Genet.. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Nishio T.,Kusaba K.: "Sequence diversity of SLG and SRK in Brassica oleracea L"Ann.Bot.. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kusaba M.,Matsushita M.,0kazaki K.,Satta Y.,Nishio T.: "Sequence and structural diversity of the S locus genes from different lines with the same self-recognition specificities in Brassica oleracea"Genetics. 154. 413-420 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] 0kazaki K.,Kusaba M.,0ckendon DJ,Nishio T.: "Characterization of S tester lines in Brassica oleracea: Polymorphism of restriction fragment length of SLG homologues and isoelectric points of S-locus glycoproteins"Theor.Appl.Genet.. 98. 1329-1334 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Sakamoto K,Kusaba M,Nishio T: "Polymorphism of the S-locus glycoprotein gene (SLG) and the S-locus related gene (SLR1) in Raphanus sativus L.and selfincompatible ornamental planets in the Brassicaceae." Mol.Gen.Genet.258:397-403. 397-403 (1998)

    • Related Report
      1998 Annual Research Report

URL: 

Published: 1998-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi