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Molecular mechanism of the intermicrobial symbiosis of an obligately symbiotic thermophilic bacterium and its ecological analyses

Research Project

Project/Area Number 10460045
Research Category

Grant-in-Aid for Scientific Research (B).

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionNihon University

Principal Investigator

BEPPU Teruhiko  Department of Applied Biological Sciences, Nihon University/ professor, 生物資源科学部, 教授 (80011873)

Co-Investigator(Kenkyū-buntansha) UEDA Kenji  Department of Applied Biological Sciences, Nihon University/lecturer, 生物資源科学部, 講師 (00277401)
Project Period (FY) 1998 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥7,100,000 (Direct Cost: ¥7,100,000)
Fiscal Year 2000: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 1999: ¥2,200,000 (Direct Cost: ¥2,200,000)
Fiscal Year 1998: ¥3,200,000 (Direct Cost: ¥3,200,000)
KeywordsSymbiobacterium thermophilum / intermicrobial symbiosis / growth factor / 16S rDNA / Bacillus / dialyzing culture / ecological distribution / yeast extract / 酵母エキス / symbiosis / growth factor / dialyzing culture / anaerobe / pH / thermophiloc bacterium
Research Abstract

The thermostable-tryptophanase producing microbe, Symbiobacterium thermophilum (ST) is a themophilic symbiotic bacterium which growth in the coculture with thermophilic Bacillus strain S (BS). In the present study, we elucidated following ; (1) as for the growth factor for ST (GF), we first established quantitative PCR procedure, which enabled specific quantification of ST.By the precise analyses based on the technique, we revealed that GF is a general metabolite existing in the culture supernatant not only of BS but of all the other bacteria tested. Dialyzing culture separating ST and BS enabled pure growth of ST, thus it was suggested that a small dialyzable molecule is responsible for the GF activity. Attempt to purify the low molecular weight substance led us to find that the GF activity is present in vapor fraction. BS culture supernatant also contained a high-molecular weight substance carrying the GF activity, which was assumed to be involved in the production of the GF of low-molecular mass.
Second, we performed phylogenetic analysis based on the 16S rDNA sequence and revealed that ST belongs to a novel branch created at the outermost position in the Gram-positive bacterial group, which did not cluster to any other bacterial group hitherto known.
Third, we examined environmental distribution of ST and its related organisms, and found that these bacteria are quite general, distributing not only in soil environment mainly including compost, but also in digestive organs of animals. Feeds for animals also frequently carried the bacteria. 16S rDNA-based phylogeny of the isolates showed that those fell into the novel branch created by ST at the outermost position in Gram-positive group, and further diversity forming new branches in the cluster. Furthermore, the DGGE analysis of the newly obtained 16S rDNA fragments implied the presence of multiple species belonging to Symbiobacterium.

Report

(4 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (8 results)

All Other

All Publications (8 results)

  • [Publications] Ohno et al.: "Establishing the independent culture of a strictly symbiotic bacterium Symbiobacterium thermophilum from its supporting Bacillus strain"Biosci. Biotechnol. Biochem.. 63. 1083-1090 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ohno et al.: "Symbiobaterium thermophilum gen.nov., sp.nov., a symbiotic thermophile that depends on co-culture with a Bacillus strain for growth"Int.J.Syst.Evol.Microbiol.. 50. 1829-1832 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ohno et al.: "Symbiobacterium thermophilum gen. nov., sp. nov., a symbiotic thermophile that depends on co-culture with a Bacillus strain for growth"Int.J.Syst.Evol.Microbiol.. 50. 1829-1832 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ohno et al.: "Establishing the independent culture of a strictly symbiotic bacterium Symbiobacterium thermophilum from its supporting Bacillus strain"Biosci.Biotech.Biochem.. 63. 1083-1090 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ohno et al.: "Symbiobacterium thermophilum gen.nov., sp.nov., a symbiotic thermophile that depends on co-culture with a Bacillus strain for growth"Int.J.Syst.Evol.Microbiol.. 50. 1829-1832 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Ohno et al.: "Establishing the independentculture of a strictly symbiotic bacterium Symbiobacteiumthermophilum from its supporting strain"Biosci.Biotechnol.Biochem.. 63. 10831-11090 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Ohno et al.: "Symbiobacteriumthermophilumgen.nov.,sp.nov.,a symbiotic thermophile depending on coculture with a Bacillus strain"Int.J.Syst.Evol.Microbiol.. (in press).

    • Related Report
      1999 Annual Research Report
  • [Publications] Ohno et al.: "Establishing the independence culture of a strictly symbiotic bacterium Symbiobacterium thermophilum from its supporting Bacillus strain." Biosci.Biotech.Biochem.in press.

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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