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Biosynthetic studies on terpenoids produced by Actinomycetes by focusing on the nonmevalonate pathway

Research Project

Project/Area Number 10460047
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioproduction chemistry/Bioorganic chemistry
Research InstitutionThe University of Tokyo

Principal Investigator

SETO Haruo  Inst. of Mol and Cell. Biosci, The University of Tokyo, Prof., 分子細胞生物学研究所, 教授 (10013335)

Co-Investigator(Kenkyū-buntansha) KUZUYAMA Tomohisa  Inst. of Mol and Cell. Biosci, The University of Tokyo, Assistant Prof., 分子細胞生物学研究所, 助手 (30280952)
SHIN-YA Kazuo  Inst. of Mol and Cell. Biosci, The University of Tokyo, Assistant Prof., 分子細胞生物学研究所, 助手 (20251481)
HAYAKAWA Yoichi  Inst. of Mol and Cell. Biosci, The University of Tokyo, Associate Prof., 分子細胞生物学研究所, 助教授 (20208606)
FURIHATA Kazuo  Dept. of Agriculture, The University of Tokyo, Assistant Prof., 農学生命科学専攻, 助手 (20219091)
FURIHATA Keiko  Inst. of Mol and Cell. Biosci, The University of Tokyo, Technician, 分子細胞生物学研究所, 教務職員
降旗 圭子  東京大学, 分子細胞生物学研究所, 教務職員
Project Period (FY) 1998 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥7,500,000 (Direct Cost: ¥7,500,000)
Fiscal Year 1999: ¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 1998: ¥5,700,000 (Direct Cost: ¥5,700,000)
Keywords3-hydroxy-3-methylglutaryl coenzyme A reductase / 2-C-methyl-D-erythritol 4-phosphate / 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol / 2-phospho-4-(cytidine 5' -diphospho)-2-C-methyl-D-erythritol / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate / 1- deoxyxylulose 5-phosphate reductoisomerase / mevalonate pathway / nonmevalonate pathway / 3-hydroxy-3-methylglutaryl coenzyme A reductase / 2-C-methyl-D-erythriitol 4-phosphate / 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol / 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase / 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol / 1-deoxyxylulose / ノボビオシン / HMG CoA reductase / 2-C-methylerythritol / BE-40644 / 1-deoxyxylulose 5-phosphate reductoisomerase
Research Abstract

We have obtained the following results.
1. Labeling experiments proved that novobiocin produced by Streptomyces niveus was biosynthesized by the nonmevalonate pathway.
2. The terpene moiety of BE-40644 produced by Actinoplanes sp. was biosynthesized by the mevalonate pathway, but the cell membrane component, menaquinone, was produced by the nonmevalonate pathway.
3. HMG CoA reductase was purified from Streptomyces sp. CL190aeriouvifer and its relevant gene was cloned.
4. The key enzyme of the nonmevalonate pathway, 1-deoxyxylulose 5-phosphate reductoisomerase, was purified from E. coli.
5. A biosynthetic intermediate of the nonmevalonate pathway, 2-C-metllyl-D-erythrito1 4-phosphate, was converted to 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythrito1 by a new enzyme, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.
6. The above mentioned 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol was converted to its 2-phosphate derivative by a new enzyme, 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase.
7. The above mentioned phosphate derivative was converted to 2-C-methyl-D-erythritol 2, 4-cyclodiphosphate.

Report

(3 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • Research Products

    (29 results)

All Other

All Publications (29 results)

  • [Publications] S. Takahashi, T. Kuzuyama and H. Seto: "Purification, characterization, and cloning of a eubacterial 3-hydroxy-3-methylglutaryl coenzyme A reductase, a key enzyme involved in the biosynthesis of terpenoids"J. Bacteriol. 181. 1256-1263 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Kuzuyama, S. Takahashi and H. Seto: "Construction and characterization of Escherichia coli disruptants defective in the yaeM gene"Biosci. Biotech. Biochem. 63. 776-778 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] H. Seto and T. Kuzuyama: "Bioactive natural products with carbon-phosphorus bonds and their biosynthesis"Nat. Prod. Rep.. 16. 589-596 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Dairi, Y. Motohira, N. Itoh, T. Kuzuyama, S. Takahashi and H. Seto: "Cloning of the genes encoding 3-hydroxy-3-methylglutaryl coenzyme A reductase from terpenoid antibiotics-producing Streptomyces strains"Mol. Gen. Genet.. 262. 957-964 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Kuzuyama, M. Takagi, K. Kaneda, T. Dairi and H. Seto: "Formation of 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol-4-phosphate by 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, a new enzyme in the nonmevalonate pathway"Tetrahedron Lett.. 41. 703-706 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Kuzuyama, M. Takagi, S. Takahashi and H. Seto: "Cloning and characterization of 1-deoxy-D-xylulose-5-phosphate synthase from Streptomyces sp. strain CL190 that uses both the mevalonate and nonmevalonate pathways for isopentenyl diphosphate biosynthesis"J. Bacteriology. 182. 891-897 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Kuzuyama, M. Takagi, K. Kaneda, H. Watanabe, T Dairi and H. Seto: "Studies on the nonmevalonate pathway: Conversion of 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol to its 2-phospho derivative by 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase"Tetrahedron Lett. 41(in press). (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Kuzuyama, M. Takagi, K. Kaneda, H. Watanabe, T. Dairi and H. Seto: "Studies on the nonmevalonate pathway: Formation of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate from 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol"Tetrahedron Lett. 41(accepted for publication).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] S. Takahashi, T. Kuzuyama and H. Seto: "Purification, characterization, and cloning of a eubacterial 3-hydroxy-3-methylglutaryl coenzyme A reductase, a key enzyme involved in the biosynthesis of terpenoids."J. Bacteriol. 181. 1256-1263 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Kuzuyama, S. Takahashi, and H. Seto: "Construction and characterization of Escherichia coli disruptants defective in the yaeM gene."Biosci. Biotech. Biochem. 63. 776-778 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] H. Seto and T. Kuzuyam: "Bioactive natural products with carbon-phosphorus bonds and their biosynthesis."Nat. Prod. Rep.. 16. 589-596 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Dairi, Y. Motohira, N. Itoh, T. Kuzuyama, S. Takahashi, and H. Seto: "Cloning of the genes encoding 3-hydroxy-3-methylglutaryl coenzyme A reductase from terpenoid antibiotics-producing Streptomyces strains."Mol. Gen. Genet. 262. 957-964 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Kuzuyama, M. Takagi, K. Kaneda, T. Dairi and H. Seto: "Formation of 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol from 2-C-methyl-D-erythritol 4-phosphate by 2- C-methyl-D-erythritol 4-phosphate cytidylyltransferase, a new enzyme in the nonmevalonate pathway."Tetrahedron Lett. 41. 703-706 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Kuzuyama, M. Takagi, S. Takahashi and H. Seto: "Cloning and characterization of 1-deoxy-D-xylulose 5-phosphate synthase from Streptomyces sp. strain CL190 that uses both the mevalonate and nonmevalonate pathways for isopentenyl diphosphate biosynthesis."J. Bacteriology. 182. 891-897 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Kuzuyama, M. Takagi, K. Kaneda, H. Watanabe, T. Dairi and H. Seto: "Studies on the nonmevalonate pathway: Conversion of 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol to its 2-phospho derivative by 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase."Tetrahedron Lett. 41 (in press). (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Kuzuyama, M. Takagi, K. Kaneda, H. Watanabe, T. Dairi and H. Seto: "Studies on the nonmevalonate pathway: Formation of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate from 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol."Tetrahedron Lett. 41 (accepted for publication).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] S.Takahashi,T.Kuzuyama and H.Seto: "Purification,characterization,and cloning of a eubacterial 3-hydroxy-3-methylglutaryl coenzyme A reductase,a key enzyme involved in the biosynthesis of terpenoids"J.Bacteriol.. 181. 1256-1263 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] T.Kuzuyama.S.Takahashi,and H.Seto: "Construction and characterization of Escherichia coli disruptants defective in the yaeM gene"Biosci.Biotech.Biochem.. 63. 776-778 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] H.Seto and T.Kuzuyama: "Bioactive natural products with carbon-phosphorus bonds and their biosynthesis"Nat.Prod.Rep.. 16. 589-596 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] T.Dairi,Y.Motohira,N.Itoh,T.Kuzuyama,S.Takahashi,and H.Seto: "Cloning of the genes encoding 3-hydroxy-3-methylglutaryl coenzyme A reducuctase from terpenoid antibiotics-producing Streptomyces strains"Mol.Gen.Genet.. 262. 957-964 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] T.Kuzuyama,M.Takagi,K.Kaneda.T.Dairi and H.Seto: "Formation of 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol from 2-C-methyl-D-erythrinol 4-phosphate by 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,a new enzyme in the nonmevalonate pathway"Tetrahedron Lett.. 41. 703-706 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] T.Kuzuyama,M.Takagi,S.Takahashi and H.Seto: "Cloning and characterization of 1-deoxy-D-xylulose 5-phosphate synthase from Streptomyces sp.strain CL190 that uses both the mevalonate and nonmevalonate pathways for isopentenyl dephosphate biosynthesis"J.Bacteriology. 182. 891-897 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] T.Kuzuyama,M.Takagi,K.Kanada,H.Watanabe,T.Dairi and H.Seto: "Studies on the nonmevalonate pathway : Formation of 2-C-methyl-C-erythritol 2,4-cyclodiphospate from 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol"Tetrahedron Lett.. 41(accepted for publication).

    • Related Report
      1999 Annual Research Report
  • [Publications] T.Kuzuyama, S.Takahashi, H.Watanabe, H.Seto: "Direct formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate by 1-deoxy-D-xylulose 5-phosphate reductoisomerase, a new enzyme in the non-mevalonate pathway to isopentenyl diphosphate." Tetrahedron Lett.39. 4509-4512 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] N.Orihara, T.Kuzuyama, S.Taka-hashi, K.Furihata and H.Seto: "Studies on the biosynthesis of terpenoid compounds produced by actinomycetes 3. Biosynthesis of the isoprenoid side chain of novobiocin via the non-mevalonate pathway in Streptomuces niveus." J.Antibiotics. 51. 676-678 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] S.Takahashi, T.Kuzuyama, H.Watanabe and H.Seto: "A novel 1-deoxy-D-xylulose 5-phosphate reductoisomerase catalyzing the formation of 2-C-methyl-D-erythritol 4-phosphate in an alternative non-mevalonate pathway for terpenoid biosynthesis." Proc.Natl.Acad.Sci.U.S.A. 95. 9879-9884 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Kuzuyama, T.Shimizu, S.Takahashi and H.Seto: "Fosmidomycin, a specific inhibitor of 1-deoxy-D-xylulose 5-phosphate reductoisomerase in the nonmevalonate pathway for terpenoid biosynthesis." Tetrahedron Lett.39. 7913-7916 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] H.Seto, N.Orihara and K.Furihata: "Studies on the biosynthesis of terpenoids produced by Actinomycetes. Part 4. Formation of BE-40644 by the mevalonate and nonmevalonate pathways." Tetrahedron Lett.39. 9497-9500 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] S.Takahashi, T.Kuzuyama, and H.Seto: "Purification, characterization, and cloning of a eubacterial 3-hydroxy-3-methylglutaryl coenzyme A reductase, a key enzyme involved in the biosynthesis of terpenoids." J.Bacteriol.in press (1999)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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