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Molecular Mechanisms for Cellular Responses to Ionizing Radiation and Oxidative Stresses

Research Project

Project/Area Number 10480132
Research Category

Grant-in-Aid for Scientific Research (B).

Allocation TypeSingle-year Grants
Section一般
Research Field 環境影響評価(含放射線生物学)
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

YONEI Shuji  Kyoto University, Graduate School of Science, 大学院・理学研究科, 教授 (60093340)

Co-Investigator(Kenkyū-buntansha) ZHANG Qiu-mei  Kyoto University, Graduate School Professor of Science Assistant Professor, 大学院・理学研究科, 助教授 (00260604)
Project Period (FY) 1998 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥10,900,000 (Direct Cost: ¥10,900,000)
Fiscal Year 2000: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 1999: ¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 1998: ¥6,100,000 (Direct Cost: ¥6,100,000)
KeywordsIonizing Radiation / Reactive Oxygen Species / SH Oxidation / Thioredoxin / Redox Regulation / Glutathione / SoxR / OxyR
Research Abstract

Escherichia coli possesses a regulon which is induced in response to oxidative stress by superoxide-generating (redox-cycling) agents mediated by the soxRS regulator. Induction of the soxRS regulon occurs in two stages of transcriptional activation. SoxR protein that is directly activated by superoxide stress stimulates the transcription of the soxS gene, which in turn activates certain genes in the soxRS regulon. SoxR is a 34-kDa homodimer containing one redox-active [2Fe-2S] cluster in the polypeptide chain. Little is known about the molecular mechanisms of such activation process. The SoxR protein is also activated by diamide, a SH-oxidizing agent, under anaerobic conditions, indicating that the SoxR is activated via its redox state. We found that the induction of SoxS is enhanced in the mutants lacking the genes of the glutaredoxin and thioredoxin systems. On the other hand, the over-expression of reduced form of glutaredoxin decreased the level of SoxS induction by menadione. E.coli cells possess a specific defense system against H_2O_2 mediated by the transcriptional activator OxyR.The inactive form of OxyR protein present in unstressed cell is oxidized upon exposure to peroxide stress and converted into its active conformation as a transcriptional activator. Reversible intramolecular disulfide bond formation between Cys-199 and Cys-208 regulates the activity of OxyR.The present experiments were done to elucidate the role of thioredoxin, glutaredoxin and their reductase systems in oxidation and reduction of OxyR.By using the OxyR-specific antibody, we found that the oxidation-reduction of OxyR was affected by the redox states of thioredoxin and glutaredoxin in E.coli. The redox state of OxyR well correlated to the level and kinetics of the expression of kat G : : lacZ gene. The high level of β-galactosidase activity occurred in E.coli trxAgrxA mutant without treatment with H_2O^2. The mutant cells contained significant amount of activated form of OxyR.

Report

(4 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (36 results)

All Other

All Publications (36 results)

  • [Publications] Q.-M.Zhang: "Role of the Escherichia coli and human DNA glycosylases that remove 5-formyl uracil from DNA in the prevention of mutations"Journal of Radiation Research. (印刷中). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Y.Matsumoto,Q.-M.Zhang,M.Takao A.Yasui and S.Yonei: "Escherichia coli Nth and human hNTH1 DNA glycosylases are involved in removal of 8-oxoguanine from 8-oxoguanine/guanine mispairs in DNA"Nucleic Acids Research. (印刷中). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] I.Miyabe,Q.-M.Zhang,K.Kino,H.Sugiyama and S.Yonei: "Mutagenic effects of 5-formyluracil on a plasmid vector during replication in Escherichia coli"International Journal of Radiation Biology. 77. 54-58 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Zhang,Q.-M.,I.Miyabe,Y.Matsumoto,H.Sugiyama and S.Yonei: "Identification of repair enzymes for 5-formyluracil in DNA : Nth, Nei and MutM proteins of Escherichia coli"Journal of Biological Chemistry. 275. 35471-35477 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nakahara,T.,Q.-M.Zhang and S.Yonei: "Identification of proteins of Escherichia coli and Saccharomyces cerevisiae that specifically bind to C/C mismatches in DNA"Nucleic Acids Research. 28. 2551-2556 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Miyabe,I.,Q.-M.Zhang,Y.Kano and S.Yonei: "Histone-like protein HU is required for recA gene-dependent DNA repair and SOS induction pathways in UV-irradiated Escherichia coli"International Journal of Radiation Biology. 76. 43-49 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Zhang,Q.-M.,I.Miyabe,K.Hashiguchi and S.Yonei: "Free Radicals in Chemistry, Biology and Medicine 2000"OICA, London. 518 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Zhang,Q.-M.,A.Tachibana and S.Yonei: "Experimental Protocols for reactive oxygen species (ROS) and reactive nitrogen species (RNS)"Oxford University Press, London. 337 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Matsumoto, Y., Q.-M.Zhang, M.Takao, A.Yasui and S.Yonei: "Escherichia coli Nth and human hNTH1 DNA glycosylases are involved in removal of 8-oxoguanine from 8-oxoguanine/guanine mispairs in DNA"Nucleic Acids Res.. (in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Zhang, Q.-M.: "Role of the Escherichia coli and human DNA glycosylases that remove 5-formyluracil from DNA in the prevention of mutations"J.Radiat. Res.. (in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Miyabe, I., Q.-M.Zhang, K.Kino, H.Sugiyama and S.Yonei: "Mutagenic effects of 5-formyluracil on a plasmid vector during replication in Escherichia coli"Int. J.Radiat. Biol. 77. 54-58 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Zhang, Q.-M., I.Miyabe, Y.Matsumoto, K.Kino, H.Sugiyama and S.Yonei: "Identification of repair enzymes for 5-formyluracil in DNA : Nth, Nei and MutM proteins of Escherichia coli"J.Biol. Chem.. 275. 35471-35477 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Zhang, Q.-M., I.Miyabe, K.Hashiguchi and S.Yonei: "Some features of base excision repair and its role in prevention of spontaneous and radiation-induced mutations"Free Radicals in Chemistry, Biology and Medicine 2000 (Edited by T.Yoshikawa, J.Yamamoto, Y.Naito and S.Toyokuni), OICA, London. 248-255 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Miyabe, I., Q.-M.Zhang, Y.Kano and S.Yonei: "Histone-like protein HU is required for recA gene-dependent DNA repair and SOS induction pathways in UV-irrdiated Escherichia coli"Int.J.Radiat.Biol.. 76. 43-49 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nakahara, T., Q.-M.Zhang and S.Yonei: "Identification of proteins of Escherichia coli and Saccharomyces cerevisiae that specifically bind to C/C mismatches in DNA"Nucleic Acids Res.. 28. 2551-2556 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Zhang, Q.-M., A.Tachibana and S.Yonei: "Oxygen stress model : E.coli, cultured cells"in : Experimental Protocols for reactive oxygen species (ROS) and reactive nitrogen species (RNS)(Edited by N.Taniguchi and J.M.C.Gutteridge), Oxford University Press, London. 316-319 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Q.-M.Zhang: "Role of the Escherichia coli and human DNA glycosylases that remove 5-formyl uracil from DNA in the prevention of mutations"Journal of Radiation Research. (印刷中). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Y.Matsumoto,Q.-M.Zhang,M.Takao A.Yasui and S.Yonei: "Escherichia coli Nth and human hNTH1 DNA glycosylases are involved in removal of 8-oxoguanine from 8-oxoguanine/guanine mispairs in DNA"Nucleic Acids Research. (印刷中). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] I.Miyabe,Q.-M.Zhang,K.Kino,H.Sugiyama and S.Yonei: "Mutagenic effects of 5-formyluracil on a plasmid vector during replication in Escherichia coli"International Journal of Radiation Biology. 77. 54-58 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Zhang,Q.-M.,I.Miyabe,Y.Matsumoto,H.Sugiyama and S.Yonei: "Identification of repair enzymes for 5-formyluracil in DNA : Nth, Nei and MutM proteins of Escherichia coli"Journal of Biological Chemistry. 275. 35471-35477 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nakahara,T.,Q.-M.Zhang and S.Yonei: "Identification of proteins of Escherichia coli and Saccharomyces cerevisiae that specifically bind to C/C mismatches in DNA"Nucleic Acids Research. 28. 2551-2556 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Miyabe,I.,Q.-M.Zhang,Y.Kano and S.Yonei: "Histone-like protein HU is required for recA gene-dependent DNA repair and SOS induction pathways in UV-irradiated Escherichia coli"International Journal of Radiation Biology. 76. 43-49 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Zhang,Q.-M.,I.Miyabe,K.Hashiguchi and S.Yonei: "Free Radicals in Chemistry, Biology and Medicine 2000"OICA,London. 518 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Zhang,Q.-M.,A.Tachibana and S.Yonei: "Experimental Protocols for reactive oxygen species(ROS) and reactive nitrogen species(RNS)"Oxford University Press, London. 337 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Zhang Q.-M.,N.Ishikawa,T.Nakahara and S.Yonei: "Escherichia coli MutY protein has a guanine-DNA glycosylase that acts on 7, 8-dihydro-8-oxoguanine: guanine mispair to prevent spontaneous G: C-C: G transversions"Nucleic Acids Res.. 26. 4669-4675 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Zhang Q.-M.,H.Sugiyama,I.Miyabe,S.Matsuka,K.Kino,I.Saito and S.Yonei: "Replication in vitro and cleavage by restriction endonuclease of 5-formyluracil- and 5-hydroxymethyluracil-containing oligonucleotides"Int. J. Radiat. Biol.. 75. 59-65 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Takao M.,Q.-M.Zhang,S.Yonei and A.Yasui: "Differential subcellular localization of human MutY homolog (hMYH) and the functional activity of adenine: 8-oxoguanine DNA glycosylase"Nucleic Acids Res.. 27. 3638-3644 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 張秋梅,松本由記子,米井脩治: "大腸菌の MutM、MutY タンパクの構造と機能"放射線生物研究. 34. 303-314 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Myabe I.,Q.-M.Zhang,Y.Kano and S.Yonei: "Histone-like protein HU is required for recA gene-dependent DNA repair and SOS induction pathways in UV-irradiated Escherichia coli"Int. J. Radiat. Biol.. 76. 43-49 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Zhang, Q.-M., A. Tachibana and S. Yonei: "Experimental Protocols for reactive oxygen species (ROS) and reactive nitrogen species (RNS) (Edited by N. Taniguchi and J. M. C. Gutteridge)"Oxford University Press, London (印刷中). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Q.-M. Zhang, Y. Matsumoto, T. Nakahara, K. Hashiguchi and S. Yonei: "Free Radicals in Chemistry, Biology and Medicine 2000 (Edited by T. Yoshikawa, J. Yamamoto, Y. Naito and S. Toyokuni)"Elsevier, Amsterdam (印刷中). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Takemoto,T.,Zhang,Q.-M.,and Yonei,S.: "Different mechanisms of thioredoxin in its reduced and oxidized forms in defense against hydrogen peroxide in Esherichia coli." Free Rad Biol.Med.24. 556-562 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Zhang,Q.-M.,Matsumoto,Y.,and Yonei,S.: "3'-Blocking damage of DNA as a mutagenic lesion caused by hydrogen peroxide in Escherichis coli." J.Radiat.Res.39. 137-144 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Zhang,Q.-M.,Ishikawa,N.,Nakahara,T.and Yonei,S.: "Escherichia coli Mut Y protein has a guanine-DNA glycosylase that acts on 7,8-dihydro-8-oxoguanine:guanine mispair to prevent spontaneous G:C-C:G transversions." Nucleic Acids Res.26. 4669-4675 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Zhang,Q.-M.,Sugiyama,H.,Miyabe and Yonei,S.: "Replication in vitro and clealvage by restriction endonuclease of 5-formyluracil-and 5-hydroxymethyluracil-containing oligonucleotides:" Int.J.Radiat.Biol.75. 59-65 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Zhang,Q.-M.,Tachibana,A.and Yonei,S.: "Exp.Protocols for Reactive Oxygen Species(ROS)and Reactive Nitrogen Species(RNS)" (Edited by N.Taniguchi and J.M.C.Gutteridge),Oxford University Press(印刷中), (1999)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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