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Molecular mechanism of processing of precursor proteins in organelles derived from parasitic organisms

Research Project

Project/Area Number 10480171
Research Category

Grant-in-Aid for Scientific Research (B).

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionKYUSHU UNIVERSITY

Principal Investigator

ITO Akio  Faculty of Sciences, KYUSHU UNIVERSITY Professor, 大学院・理学研究院, 教授 (30037379)

Co-Investigator(Kenkyū-buntansha) KITADA Sakae  Faculty of Sciences, KYUSHU UNIVERSITY Assistant (professor), 大学院・理学研究院, 助手 (20284482)
OGISHIMA Tadasi  Faculty of Sciences, KYUSHU UNIVERSITY Asssociate Professor, 大学院・理学研究院, 助教授 (70177153)
Project Period (FY) 1998 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥12,500,000 (Direct Cost: ¥12,500,000)
Fiscal Year 2000: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1999: ¥2,400,000 (Direct Cost: ¥2,400,000)
Fiscal Year 1998: ¥8,100,000 (Direct Cost: ¥8,100,000)
Keywordsprocessing peptidase / processing / precursor protein / mitochondria / signal recognition / parasite / X-ray analysis / peptide substrate / X線構造解析 / 前駆体タンパク質 / ペプチド基質 / ヒドロゲノソーム
Research Abstract

Mechanism of processing of precursor proteins in organelles derived from parasitic organisms.
(1) Mitochondrial processing peptidase : Systematic and quantitative analyses, using various synthetic peptides based on the amino acid sequence of the extension peptides of the precursors, demonstrated that a combination of residues around the cleavage site, including the proximal arginine and residues at positions 1, 2, and 3, and the distal basic amino acids appears to be responsible for recognition of the substrates and for determination of the cleavage site by MPP.Functional amino acid residues in β-MPP were determined by site-directed mutation experiments. Shortening of the glycine-rich stretch in α-MPP led to a dramatic reduction of interaction between the enzyme and substrate peptides and cleavage reaction. Fluorescence resonance energy transfer (FRET) measurements indicate that the N-terminal portion and the portion around the cleavage site of the extension peptides interact with specific sites in the MPP molecule. The structures of recombinant yeast MPP and a cleavage-deficient mutant of MPP complexed with synthetic signal peptides were determined using X-ray crystallographic techniques.
(2) MPP-like proteases of protozoan : cDNAs of MPP-like proteases of trypanosoma was obtained and the amino acid sequence was deduced.

Report

(4 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (31 results)

All Other

All Publications (31 results)

  • [Publications] 下方国稔 等: "Role of a-subunit of Mitochondrial Processing Peptidase in Substrate Recognition."J.Biol.Chem.. 273. 25158-25163 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 小島克彦 等: "Cooperative Formation of a Substrate-Binding Pocket by a- and b- subunits of Mitochondrial Processing Peptidase"J.Biol.Chem.. 273. 32542-32546 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 北田栄 等: "Glutamate Residues Required for Substrate Binding and Cleavage Activity in Mitochondrial Processing Peptidase."J.Biol.Chem.. 273. 32547-32553 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 宋明哲 等: "Importance of Residues Carboxyl I Terminal Relative to the Cleavage Site in Substrates of Mitochondrial Processing Peptidase for Their Specific Recognition and Cleavage."J.Biochem.. 124. 1045-1051 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 森脇香 等: "Analysis of Recognition Elements for Mitochondrial Processing Peptidase Using Artificial Amino Acids : Role of the intervening portion and proximal arginine."J.Biochem.. 126. 874-878 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 伊藤明夫: "Mitochondrial Processing Peptidase : Multiple-site recognition of precursor proteins"Biochem. Biophys.Res.Commun.. 265. 611-616 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 永尾有美子 等: "Possible Role of the Glycine-rich Region in Mitochondrial Processing Peptidase a-Subunit"J.Biol.Chem.. 275. 34552-34556 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 北田栄,伊藤明夫: "Electrostatic Recognition of Matrix Targeting Signal by Mitochondrial Processing Peptidase"J.Biochem.. 129. 155-161 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 小島克彦 等: "A Proposed Common Structure of Substrates Bound to Mitochondrial Processing Peptidase"J.Biol.Chem.. 276. 2115-2121 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 伊藤明夫: "タンパク質の細胞内輸送とプロセシング"化学工業. 51. 51-57 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 伊藤明夫: "タンパク質分解-分子機構と細胞機能"東京化学同人. 236(8) (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Shimokata et al.: "Role of α-subunit of mitochondrial processing peptidase in substrate recognition"J.Biol.Chem.. 273. 25158-25163 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.kojima et al.: "Cooperative formation of a substrte-binding pocket by α- and β-subunits of mitochondrial processing peptidase"J.Biol.Chem.. 273. 32542-32546 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Kitada et al.: "Glutamate residues required for substrate binding and cleavage activity in mitochondrial processing peptidase"J.Biol.Chem.. 273. 32547-32553 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] M.Song et al.: "Importance of residues carboxy terminal relative to the cleavage site in substrates of mitochondrial processing peptidase for their specific recognition and cleavage"J.Biochem.. 124. 1045-1051 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.Moriwaki et al.: "Analysis of recognition elements for mitochondrial processing peptidase using artificial amino acids ; role of the intervening portion and proximal arginine"J.Biochem.. 126. 874-878 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] A.Ito: "Mitochondrial processing peptidase ; multiple-site recognition of precursor proteins (Breakthroughs and Views)"Biochem.Biophys.Res.Commun.. 265. 611-616 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Y.Nagao et al.: "Possible role of the glycine-rich region in mitochondrial processing peptidase α-subunit"J.Biol.Chem.. 275. 34552-34556 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Kitada & A.Ito: "Electrostatic recognition of matrix targeting signal by mitochondrial processing peptidase"J.Biochem.. 129. 155-161 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.Kojima et al.: "A proposed common structure of substrate bound to mitochondrial processing peptidase"J.Biol.Chem.. 276. 2115-2121 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 永尾有美子 等: "Possible Role of the Glycine-rich Region in Mitochondrial Processing Peptidase a-Subunit"J.Biol.Chem.. 275. 34552-34556 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 北田栄,伊藤明夫: "Electrostatic Recognition of Matrix Targeting Signal by Mitochondrial Processing Peptidase"J.Biochem.. 129. 155-161 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 小島克彦 等: "A Proposed Common Structure of Substrates Bound to Mitochondrial Processing Peptidase"J.Biol.Chem.. 276. 2115-2121 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 伊藤明夫: "タンパク質の細胞内輸送とプロセシング"化学工業. 51. 51-57 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 伊藤明夫: "タンパク質分解-分子機構と細胞機能"東京化学同人. 236 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 森脇香、等: "Analysis of Recognition Elements for Mitochondrial Processing Peptidase Using Artificial Amino Acids;Role of the intervening"J.Biochem.. 126・5. 874-878 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 伊藤明夫: "Mitochondrial Processing Peptidase;Multiple-site recognition of precursor proteins"Biochem.Biophys.Res.Commun.. 265・3. 611-616 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 下方国稔, 等: "Role of α-subunit of Mitochondrial Processing Peptidase in Substrate Recognition." J. Biol. Chem.273・39. 25158-25163 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 小島克彦、 等: "Cooperative Formation of a Substrate-Binding Pocket by α- and β-subunits of Mitochondrial Processing Peptidase." J. Biol. Chem.273・49. 32542-32546 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 北田 栄、 等: "Glutamate Residues Required for Substrate Binding and Cleavage Activity in Mitochondrial Processing Peptidase." J. Biol. Chem.273・49. 32547-32553 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 宋 明哲、 等: "Importance of Residues Carboxyl Terminal Relative to the Cleavage Site in Substrates of Mitochondrial Processing Peptidase for Their Specific Recognition and Cleavage." J. Biochem.124・5. 1045-1051 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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