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Time-Resolved Vibrational Spectroscopic Study of Higher Order Structural Changes of Protein Induced by Nanosecond Temperature Jump.

Research Project

Project/Area Number 10480187
Research Category

Grant-in-Aid for Scientific Research (B).

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionOkazaki National Research Institutes

Principal Investigator

KITAGAWA Teizo  Okazaki National Research Institutes, 統合バイオサイエンスセンター, 教授 (40029955)

Co-Investigator(Kenkyū-buntansha) OGURA Takashi  The University of Tokyo, 大学院・総合文化研究科, 助教授 (70183770)
MIZUTANI Yashisa  Okazaki National research Institutes, 分子科学研究所, 助手 (60270469)
Project Period (FY) 1998 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥10,900,000 (Direct Cost: ¥10,900,000)
Fiscal Year 2000: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 1999: ¥2,200,000 (Direct Cost: ¥2,200,000)
Fiscal Year 1998: ¥7,000,000 (Direct Cost: ¥7,000,000)
KeywordsTemperature jump / Time-resolved Raman / Ribonuclease / Thermal unfolding of protein / nanosecond T-jump / time-resolved vibrational spectra / thermal denaturation of protein / 熱変性 / 蛋白質アンファルディング / 蛋白質高次構造変化 / 蛋白質フォルディング
Research Abstract

A nanosecond temperature jump (T-jump) apparatus was constructed and combined with time-resolved Raman measurements to investigate thermal unfolding of a protein for the first time. The 1.56 μm-heat pulse with 9 ns width, 10 Hz was obtained through the two-step stimulated Raman scattering in D_2 gas involving seeding and amplification. To achieve uniform temperature rise, the counter-propagation geometry was adopted. The temperature rise was determined by anti-Stokes to Stokes intensity ratios of the 317 and 897 cm^<-1> bands of MoO^<2->_4 aqueous solution. The T-jump as large as 9℃ in 10 ns was attained. The unfolding of bovine pancreatic ribonuclease A was monitored with time-resolved Raman spectra excited at 532 nm. In the initial 200 ns after T-jump, the C-S stretch of Met residues exhibited 10% change of that expected from the steady state spectra and another 10% in 5 ms. The Raman intensity of S0^<2->_4 ions around 980 cm^<-1> increased at 100 μs delay and was shifted to a lower frequency than the steady state frequency of the elevated temperature, presumably due to partial release from the active site. The S-S stretches and tyrosine doublets displayed little change within 5 ms. Thus, the conformation change in the initial step of unfolding is not always concerted.

Report

(4 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (8 results)

All Other

All Publications (8 results)

  • [Publications] K.Yamamoto et al.: "Nanosecond Temperature Jump and Time-resolved Raman Study of Thermal Unfolding of Ribonuclease A"Biophysical Journal. 79. 485-495 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.Yamamoto et al.: "Construction of Novel Nanosecond Temperature Jump Apparatuses Applicable to Raman Mesurements and Direct Observation of Transient Temperature"Applied Spectroscopy. 54. 1591-1604 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.Yamamoto, Y.Mizutani, and T.Kitagawa: "Constrctuion of novel nanosecond temperature jump apparatuses applicable to Raman measurements and direct observation of transient temperature."Applied Spectroscopy. 54. 1591-1604 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.Yamamoto, Y.Mizutani, and T.Kitagawa: "Nanosecond temperature jump and time-resolved Raman study of thermal unfolding of ribonuclease A"Biophysical Journal. 79. 485-495 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.Yamamoto et al.: "Nanosecond Temperature Jump and Time-resolved Raman Study of Thermal Unfolding of Ribonuclease A"Biophysical Journal. 79. 485-495 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] K.Yamamoto et al.: "Construction of Novel Nanosecond Temperature Jump Apparatuses Applicable to Raman Mesurements and Direct Observation of Transient Temperature"Applied Spectroscopy. 54. 1591-1604 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] K. Yamamoto, Y. Mizutani and T. Kitagawa: "Nanosecond Temperature Jump and Time-resolved Raman Study of Thermal Unfolding of Ribonuclease A"Biophysical Journal. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Y. Mizutani, K. Yamamoto and T. Kitagawa: "Fast Protein Dynamics Probed by Vibrational Spectroscopy"Old and New Views of Protein Folding. 85-94 (1999)

    • Related Report
      1999 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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