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AAA Protease FtsH Controlling a Variety of Cellular Functions

Research Project

Project/Area Number 10480195
Research Category

Grant-in-Aid for Scientific Research (B).

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionKUMAMOTO UNIVERSITY

Principal Investigator

OGURA Teru  INSTITUE OF MOLECULAR EMBRYOLOGY AND GENETICS, KUMAMOTO UNIVERSITY, ASSOCIATE PROFESSOR, 発生医学研究センター, 助教授 (00158825)

Project Period (FY) 1998 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥9,300,000 (Direct Cost: ¥9,300,000)
Fiscal Year 2000: ¥2,500,000 (Direct Cost: ¥2,500,000)
Fiscal Year 1999: ¥2,900,000 (Direct Cost: ¥2,900,000)
Fiscal Year 1998: ¥3,900,000 (Direct Cost: ¥3,900,000)
KeywordsATPase / protease / membrane protein / chaperone / stress response / lipids / plasmid partition / oligomer / 胞子形成 / コンピューターモデリング / 熱ショック応答 / リポ多糖 / 生体膜 / ATP加水分解 / 蛋白-蛋白相互作用
Research Abstract

We have studied an essential, membrane-bound ATP-dependent protease, FtsH in E.coli. FtsH controls several cellular functions by degrading specific regulatory proteins such as sigma32 and LpxC.Sigma32 is the heat shock transcription factor. Efficient degradation of sigma32 by FtsH requires the DnaK chaperone system, which may alter sigma32 to a form competent to the FtsH action. Loss of the ftsH function results in stabilization of LpxC, the committed enzyme involved in lipid A synthesis, leading overproduction of lipopolysaccharide. Under such conditions, abnormally layered membrane structures are formed in the periplasmic space. Certain mutations, which upregulate phospholipid synthesis, suppresses both lethality of ftsH mutations and formation of abnormal membrane structures. Mini-F plasmids are unstably maintained in temperature-sensitive ftsH mutants at permissive temperatures for cell growth. We have also studied colicin tolerance in ftsH mutants. FtsH forms oligomers, and oligomerizaton is essential for its activity. N-terminal transmembrane and periplasmic domains, in particular the second transmembrane domain, are important for oligomerization. Site-directed mutagenesis and homology modeling revealed that the ATP-binding pocket is formed at the interface of neighboring subunits, and that invariant residues in the AAA ATPase-specific sequence, SRH, play important roles in ATP hydrolysis. These results have led us to propose an intermolecular catalysis model for the AAA ATPase. We have also analyzed functional motifs of an AAA^+ protein, RuvB, and investigated similarities and differences between AAA and AAA^+ ATPases.

Report

(4 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (48 results)

All Other

All Publications (48 results)

  • [Publications] Inagawa,T.,Kato,J.,Niki,H.,Karata,K.,and Ogura,T.: "Defective plasmid partition in ftsH mutants of Escherichia coli."Mol.Gen.Genet.. (in press). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 小椋光,唐田清伸,千葉志信,秋山芳展: "AAAプロテアーゼ"蛋白質核酸酵素(臨時増刊号「新世紀に向けての蛋白質科学の進展」(中村春木,森川耿右,鈴木紘一,三浦謹一郎(編)). (印刷中). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Karata,K.,Verma,C.S.,Wilkinson,A.J.,and Ogura: "Probing the mechanism of ATP hydrolysis and substrate translocation in the AAA protease FtsH by modelling and mutagenesis."Mol.Microbiol.. 39. 890-903 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 小椋光,唐田清伸: "リング状オリゴマーを形成するAAA^+ATPaseの構造と機能."細胞工学. 19. 1362-1371 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tatsuta,T.,Joo,D.M.,Calendar,R.,Akiyama,Y.,and Ogura,T.: "Evidence for an active role of the DnaK chaperone system in the degradation of σ^<32>."FEBS Lett.. 478. 271-275 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Prajapati,R.,Ogura,T.,and Cutting,S.M.: "Structural and functional studies on an FtsH inhibitor from Bacillus subtilis."Biochim.Biophys.Acta. 1475. 353-359 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Iwasaki,H.,Han,Y.-W.,Okamoto,T.,Ohnishi,T.,Yoshikawa,M.,Yamada,K.,Toh,H.,Daiyasu,H.,Ogura,T.,and Shinagawa.H.: "Mutational analysis of the functional motifs of RuvB, an AAA^+ class helicase and motor protein for Holliday junction branch migration."Mol.Microbiol.. 36. 528-538 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Teff,D.,Koby,S.,Shotland,Y.,Ogura,T.,Oppenheim,A.B.: "A colicin-tolerant Escherichia coli mutant that confers Hfl phenotype carries two mutations in the region coding for the C-terminal domain of FtsH(HflB)."FEMS Microbiol.Lett.. 183. 115-117 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Makino,S.,Makino,T.,Abe,K.,Hashimoto,J.,Tatsuta,T.,Kitagawa,M.,Mori,H.,Ogura,T.,Fujii,T.,Fushinobu,S.,Wakagi,T.,and Matsuzawa: "Second transmembrane segment of FtsH plays a role in its proteolytic activity and homo-oligomerization."FEBS Lett.. 460. 554-558 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Karata,K.,Inagawa,T.,Wilkinson,A.J.,Tatsuta,T.,and Ogura: "Dissecting the role of a conserved motif (the second region of homology) in the AAA family of ATPases : site-directed mutagenesis of the ATP-dependent protease FtsH."J.Biol.Chem.. 274. 26225-26232 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ogura,T.,Inoue,K.,Tatsuta,T.,Suzaki,T.,Karata,K.,Young,K.,Su,L.H.,Fierke,C.A.,Jackman,J.E.,Raetz,C.R.,Coleman,J.,Tomoyasu,T.,and Matsuzawa,H.: "Balanced biosynthesis of major membrane components through regulated degradation of the committed enzyme of lipid A biosynthesis by the AAA protease FtsH (HflB) in Escherichia coli."Mol.Microbiol.. 31. 833-844 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 龍田高志,小椋光: "大腸菌の熱ショック応答-分子シャペロンDnaKとFtsHプロテアーゼによる制御-."生物物理. 225. 295-300 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tomoyasu,T.,Ogura,T.,Tatsuta,T.,and Bukau,B.: "Levels of DnaK and DnaJ provide tight control of heat shock gene expression and protein repair in Escherichia coli."Mol.Microbiol.. 30. 567-581 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tatsuta,T.,Joo,D.M.,Calendar,R.,Akiyama,Y.,and Ogura,T.: "Heat shock regulation in the ftsH null mutant of Escherichia coli : dissection of stability and activity control mechanisms of σ^<32> in vivo."Mol.Microbiol.. 30. 583-593 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Akiyama,Y.,Kihara,A.,Mori,H.,Ogura,T.,and Ito,K.: "Roles of the periplasmic domain of Escherichia coli FtsH (HflB) in protein interactions and activity modulation."J.Biol.Chem.. 273. 22326-22333 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 小椋光,龍田高志,友安俊文: "分子シャペロンによる細胞機能制御(永田和宏,森正敬,吉田賢右(編)).シュプリンガー・フェアラークフ"大腸菌のストレス応答と分子シャペロン.(印刷中). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 小椋光: "生体膜のエネルギー装置(吉田賢右,茂木立志(編)).共立出版,東京"AAA ATPase:細胞のATPエンジン(その2). 12 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 唐田清伸,小椋光: "タンパク質分解-分子機構と細胞機能(鈴木紘一,小南英紀,田中啓二(編))ジュプリンガー・フェアラーク,東京"ATP依存性プロテアーゼ. 9 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Inagawa, T., Kato, J., Niki, H., Karata, K., and Ogura, T.: "Defective plasmid partition in ftsH mutants of Escherichia coli."Mol.Gen.Genet.. (in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Karata, K., Verma, C.S., Wilkinson, A.J., and Ogura, T.: "Probing the mechanism of ATP hydrolysis and substrate translocation in the AAA protease FtsH by modelling and mutagenesis."Mol.Microbiol.. 39. 890-903 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tatsuta, T., Joo, D.M., Calendar, R., Akiyama, Y., and Ogura, T.: "Evidence for an active role of the DnaK chaperone system in the degradation of σ^<32>."FEBS Lett.. 478. 271-275 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Prajapati, R., Ogura, T., and Cutting, S.M.: "Structural and functional studies on an FtsH inhibitor from Bacillus subtilis. Biochim."Biochim.Biophys.Acta. 1475. 353-359 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Iwasaki, H., Han, Y.-W., Okamoto, T., Ohnishi, T., Yoshikawa, M., Yamada, K., Toh, H., Daiyasu, H., Ogura, T., and Shinagawa, H.: "Mutational analysis of the functional motifs of RuvB, an AAA^+ class helicase and motor protein for Holliday junction branch migration."Mol.Microbiol.. 36. 528-538 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Teff, D., Koby, S., Shotland, Y., Ogura, T., Oppenheim, A.B.: "A colicin-tolerant Escherichia coli mutant that confers Hfl phenotype carries two mutations in the region coding for the C-terminal domain of FtsH (HflB)."FEMS Microbiol.Lett.. 183. 115-117 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Makino, S., Makino, T., Abe, K., Hashimoto, J., Tatsuta, T., Kitagawa, M., Mori, H., Ogura, T., Fujii, T., Fushinobu, S., Wakagi, T., and Matsuzawa, H.: "Second transmembrane segment of FtsH plays a role in its proteolytic activity and homooligomerization."FEBS Lett.. 460. 554-558 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Karata, K., Inagawa, T., Wilkinson, A.J., Tatsuta, T., and Ogura, T.: "Dissecting the role of a conserved motif (the second region of homology) in the AAA family of ATPases : site-directed mutagenesis of the ATP-dependent protease FtsH."J.Biol.Chem.. 274. 26225-26232 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ogura, T., Inoue, K., Tatsuta, T., Suzaki, T., Karata, K., Young, K., Su, L.H., Fierke, C.A., Jackman, J.E., Raetz, C.R., Coleman, J., Tomoyasu, T., and Matsuzawa, H.: "Balanced biosynthesis of major membrane components through regulated degradation of the committed enzyme of lipid A biosynthesis by the AAA protease FtsH (HflB) in Escherichia coli."Mol.Microbiol.. 31. 833-844 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tomoyasu, T., Ogura, T., Tatsuta, T., and Bukau, B.: "Levels of DnaK and DnaJ provide tight control of heat shock gene expression and protein repair in Escherichia coli."Mol.Microbiol.. 30. 567-581 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tatsuta, T., Tomoyasu, T., Bukau, B., Kitagawa, M., Mori, H., Karata, K., and Ogura, T.: "Heat shock regulation in the ftsH null mutant of Escherichia coli : dissection of stability and activity control mechanisms of σ^<32> in vivo."Mol.Microbiol.. 30. 583-593 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Akiyama, Y., Kihara, A., Mori, H., Ogura, T., and Ito, K.: "Roles of the periplasmic domain of Escherichia coli FtsH (HflB) in protein interactions and activity modulation."J.Biol.Chem.. 273. 22326-22333 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Inagawa,T.,Kato,J.,Niki,H.,Karata,K.,and Ogura,T.: "Defective plasmid partition in ftsH mutants of Escherichia coli."Mol.Gen.Genet.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 小椋光,唐田清伸,千葉志信,秋山芳展: "AAAプロテアーゼ"蛋白質核酸酵素(臨時増刊号「新世紀に向けての蛋白質科学の進展」(中村春木,森川耿右,鈴木紘一,三浦謹一郎(編)). (印刷中). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] karata,K.,Verma,C.S.,Wilkinson,A.J.,and Ogura: "Probing the mechanism of ATP hydrolysis and substrate translocation in the AAA protease FtsH by modelling and mutagenesis."Mol.Microbiol.. 39. 890-903 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 小椋光,唐田清伸: "リング状オリゴマーを形成するAAA^+ ATPaseの構造と機能."細胞工学. 19. 1362-1371 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Tatsuta,T.,Joo,D.M.,Calendar,R.,Akiyama,Y.,and Ogura,T.: "Evidence for an active role of the DnaK chaperone system in the degradation of σ^<32>."FEBS Lett.. 478. 271-275 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Prajapati,R.,Ogura,T.,and Cutting,S.M.: "Structural and functional studies on an FtsH inhibitor from Bacillus subtilis."Biochim.Biophys.Acta. 1475. 353-359 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Iwasaki,H.,Han,Y.-W.,Okamoto,T.,Ohnishi,T.,Yoshikawa,M.,Yamada,K.,Toh,H.,Daiyasu,H.,Ogura,T.,and Shinagawa,H.: "Mutational analysis of the functional motifs of RuvB,an AAA^+ class helicase and motor protein for Holliday junction branch migration."Mol.Microbiol.. 36. 528-538 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Teff,D.,Koby,S.,Shotland,Y.,Ogura,T.,Oppenheim,A.B.: "A colicin-tolerant Escherichia coli mutant that confers Hfl phenotype carries two mutations in the region coding for the C-terminal domain of FtsH (HflB)."FEMS Microbiol.Lett.. 183. 115-117 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 小椋光,龍田高志,友安俊文: "分子シャペロンによる細胞機能制御(永田和宏,森正敬,吉田賢右(編)).シュプリンガー・フェアラークフ"大腸菌のストレス応答と分子シャペロン.(印刷中). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 小椋光: "生体膜のエネルギー装置(吉田賢右,茂木立志(編)).共立出版,東京"AAA ATPase:細胞のATPエンジン(その2). 12 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Iwasaki,H.: "Identification of functional motifs of the RuvB motor protein for Holliday Junction branch migration, an AAA+ class helicase, by mutational analyses and sequence alignment of the homologs."Mol. Microbiol.. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Teff,D.: "A colicin-tolerant Escherichia coli mutant that confers Hfl phenotype carries two mutations in the region coding for the C-terminal domain of FtsH(HflB)."FEMS Microbiol. Lett.. 183. 115-117 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Makino,S.: "Second transmembrane segment of FtsH plays a role in its proteolytic activity and homo-oligomerization."FEBS Lett.. 460. 554-558 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Karata,K: "Dissectiong the role of a conserved motif (the second region of homology) in the AAA family of ATPases: site-directed mutagenesis of the ATP-dependent protease FtsH."J. Biol. Chem.. 274. 26225-26232 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Tatsuta,T.: "Heat shock regulation in the ftsH null mutant of Escherichia coli: dissection of stability and activity control mechanisms of σ^<32> in vivo." Mol.Microbiol.30. 583-593 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Tomoyasu,T.: "Levels of DnaK and DnaJ provide tight control of heat shock gene expression and protein repair in Escherichia coli." Mol.Microbiol.30. 567-581 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Akiyama,Y.: "Roles of the periplasmic domain of Eschericia coli FtsH(HflB) in protein interactions and activity modulation." J.Biol.Chem.28. 22326-22333 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Ogura,T.: "Balanced biosynthesis of major membrace components through regulated degradation of the committed enzyme of lipid A biosynthesis by the AAA protease FtsH(HflB) in Escherichia coli." Mol.Microbiol.31. 833-844 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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