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Molecular Cell Biological Studies of Autophagy

Research Project

Project/Area Number 10480202
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Cell biology
Research InstitutionOkazaki National Research Institutes

Principal Investigator

OHSUMI Yoshinori  Okazaki Natl. Res. Inst. NIBB Professor, 基礎生物学研究所, 教授 (30114416)

Co-Investigator(Kenkyū-buntansha) KAMADA Yoshiaki  Okazaki Natl. Res. Inst. NIBB Research Associate, 基礎生物学研究所, 助手 (20291891)
NODA Takeshi  Okazaki Natl. Res. Inst. NIBB Research Associate, 基礎生物学研究所, 助手 (00290908)
YOSHIMORI Tamotsu  Okazaki Natl. Res. Inst. NIBB Associate Professor, 基礎生物学研究所, 助教授 (60191649)
OHSUMI Mariko  Teikyou Univ. of Sci. & Tech., Faculty of Science & Engineering Associate Professor, 理工学部, 助教授 (40168927)
Project Period (FY) 1998 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥14,800,000 (Direct Cost: ¥14,800,000)
Fiscal Year 1999: ¥5,500,000 (Direct Cost: ¥5,500,000)
Fiscal Year 1998: ¥9,300,000 (Direct Cost: ¥9,300,000)
KeywordsAutophagy / yeast / Protein conjugation / autophagosome / Apg8 / Apg5 / Apg12 / Apg10 / オートファジー / 酵母 / 液胞 / 自食作用 / タンパク質分解 / タンパク質結合反応 / 栄養飢餓
Research Abstract

We discovered autophagy in yeast and defined the whole process., then isolated a set of autophagy-deficient mutants, and have cloned most of APG genes essential for autophagy. We are now characterizing these gene products. We found a novel protein conjugation system required for autophagy. The C-terminal Gly of Apg12 is bound to Lys residue of Apg5 via an isopeptide bond. This conjugation reaction is distinct from but quite similar to ubiquitination. Apg10 functions as an E2 conjugating enzyme by showing thioester bond between Apg12 and Apg10. In a two-hybrid screen with Apg12 as a bait, we identified Apg16. We noticed that the Apg16 is bound to preferentially to Apg12-Apg5 conjugate. Apg16 forms an homo-oligomer via the coiled coil domain. Hence, this hetero-oligomeric large protein complex may play a role in autophagic process.
Apg8 is up-regulated upon starvation. Indirect immunofluorescence study showed that intracellular localization of Apg8 drastically changes. Upon starvation, Apg8 appears adjacent to the vacuole, which represents autophagosome or its intermediate and finally autophagic bodies. According to EM analysis, Apg8 is mostly enriched on the intermediate of autophagosome. Thus, Apg8 could be a useful tracer for membrane flow in autophagosome formation. Formation process of autophagosome is accompanied with multiple fusion of small precursor structures to the intermediate structure.

Report

(3 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] Mizushima, N. et al.: "Apg16p is required for the function of the Apg-12p-Apg5p conjugate in the yeast autophagic pathway"EMBO J.. 18. 3888-3896 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Shintani, T. et al.: "Apg10p, a novel protein-conjugating enzyme essential for autophagy in yeast"EMBO J.. 18. 5234-5241 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kirisato, T. et al.: "Formation process of autophagosome is traced with Apg8/Aut7p in yeast"J. Cell Biol.. 147. 435-446 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] George, M, D. et al.: "Apg5p function in the sequestration step in the cytoplasm to vacuole targeting and macroautophygy pathway"Mol. Biol. Cell. in press.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Nada, T. et al.: "Apg9/Cvt7p is and integral membrane protein required for transport vesicle formation in the Cvt and autophagy pathways"J. Cell Biol.. 148. 465-479 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Furukawa, K. et al.: "A protein conjugation system in yeast with homology to biosynthetic enzyme reaction of prokaryotes"J. Biol. Chem.. 275. 7462-7465 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Mizushima, N. et al.: "ApgI6p is required for the function of the Apg-12p-Apg5p conjugate in the yeast autophagic pathway."EMBO J.. 18. 3888-3896 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Shintani, T. et al.: "Apg10p, a novel protein-conjugating enzyme essential for autophagy in yeast."EMBO J.. 18. 5234-5241 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kirisako, T. et al.: "Formation process of autophagosome is traced with Apg8/Aut7p in yeast."J. Cell Biol.. 147. 435-446 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] George, M, D. et al.: "Apg5p function in the sequestration step in the cytoplasm to vacuole targettin and macroautophagy pathways."

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Noda, T. et al.: "Aog9/Cvt7p is and integral membrane protein required for transport vesicle formation in the Cvt and autophagy pathways."J. Cell Biol.. 148. 465-479 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Furukawa, K. et al.: "A protein conjugatian system in yeast with homology to biosynthetic enzyme reaction of prokaryotes."

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Mizushima, N. et al.: "Apg16p is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagic pathway"EMBO J.. 18. 3888-3896 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Shintani, T. at al.: "Apg10p, a novel protein-conjugating enzyme essential for autophagy in yeast"EMBO J.. 18. 5234-5241 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kirisako, T. et al.: "Formation process of autophagosome is traced with Apg8/Aut7p in yeast"J. Cell Biol.. 147. 435-446 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] George, M, D. et al.: "Apg5p functions in the sequestration step in the cytoplasm to vacuole targeting and macroautophagy pathways"Mol. Biol. Cell. (in press ).

    • Related Report
      1999 Annual Research Report
  • [Publications] Noda, T. et al.: "Apg9/Cvt7p is an integral membrane protein required for transport vesicle formation in the Cvt and autophagy pathways"J. Cell Biol.. (in press).

    • Related Report
      1999 Annual Research Report
  • [Publications] Furukawa, K. et al.: "A protein conjugation system in yeast with homology to biosyntheic enzyme reavion of prokarvotes"J. Biol. Chem.. ".

    • Related Report
      1999 Annual Research Report
  • [Publications] Noda,T.et al: "Tor,a phosphatidylinositol kinase homologue,controls autophagy in yeast." J.Biol.Chem.273. 3963-3966 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kametaka,S.et al: "Apg14p and Apg6/Vps30p form a protein complex essential for autophagy in the yeast,Saccharomyces cerevisiae." J.Biol Chem.273. 22284-22291 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Mizushima,N.et al: "A novel protein conjugation system essential for autophagy." Nature. 395. 395-398 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Mizushima,N.et al: "A New Protein Conjugation System in Human.The counterpart of the yeast Apg12p conjugation system essential for autophagy." J.Biol.Chem.273. 33889-33892 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Klionsky,D.J.et al: "Vacuolar import of proteins and organelles from the cytoplasm" Ann.Rev.Cell Devlop.Biol.12(in press). (1999)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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