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Study on genetic diversity of endangered species and development of molecular genetic techniques for conservation of genetic resources

Research Project

Project/Area Number 10556074
Research Category

Grant-in-Aid for Scientific Research (B).

Allocation TypeSingle-year Grants
Section展開研究
Research Field 生物資源科学
Research InstitutionHOKKAIDO UNIVERSITY

Principal Investigator

MASUDA Ryuichi  Hokkaido Univ.Fac.of Sci., Inst., 理学部, 助手 (80192748)

Co-Investigator(Kenkyū-buntansha) UMEHARA Chizuko  Hokkaido Univ.Fac.of Sci., Tech., 理学部, 教務職員 (80291227)
OSHIDA Tatsuo  Hokkaido Univ.Fac.Of Sci., Postdoc., 理学部, 研究機関研究員
OHDACHI Satoshi  Hokkaido Univ.Inst.of Low Temp.Sci., Inst., 低温科学研究所, 助手 (60292041)
Project Period (FY) 1998 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥12,200,000 (Direct Cost: ¥12,200,000)
Fiscal Year 2000: ¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1999: ¥2,900,000 (Direct Cost: ¥2,900,000)
Fiscal Year 1998: ¥7,200,000 (Direct Cost: ¥7,200,000)
KeywordsEndangered species / Genetic diversity / Genetic resource / Biogeography / Molecular Phylogeny / Species conservation / Endemic species / Evolution / 系統進化
Research Abstract

The objective of this project was to understand genetic diversity of endangered species and to develop molecular genetic techniques for their conservation. The results obtained in this study were as folows :
1)Molecular phylogeny of mitochondrial DNA(mtDNA)showed that genetic variations within the Japanese population of golden eagles were very small. In addtion, the low level of genetic differences between Japanese, Korean, and Chinese populations indicated genetic communication in Far Eastern areas because golden eagles have wide range of movement. Our data provided useful information to the capture-breeding plan of this species in zoological gardens of our country.
2)In Hokkaido brown bears, we found three mtDNA lineages which were distributed separately in southern Hokkaido, North-central Hokkaido, and eastern Hokkaido. The lineage of southern Hokkaido was phylogenetically closer to the Tibetan brown bear, while the north-central Hokkaido lineage was very much closer to the continental populations around Okhotsk Sea. This indicates that the ancestry of Hokkaido brown bears immigrated to Hokkaido in different routes or different times. in addition, we found repetitive sequences within the mtDNA control region, which are polymorphic and heteroplasmic. Our results provided invaluable information to considering conservation of species and genetic resources of the worldwide brown bear populations.
3)We found three mtDNA lineages in sika deer population in Hokkaido. But the distribution patterns were not so clear like brown bears'. Our data indicated that the deer population recovered along conifer forests from their bottleneck due to heavy snow of the Meiji period. Microsatellite analysis showed that the low level of genetic diversity in the deer population of Hokkaido.
4)We discussed biogeography and genetic features based on molecular phylogenetic data of the Japanese weasel and flying squirrels in addition to the above species.

Report

(4 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (34 results)

All Other

All Publications (34 results)

  • [Publications] Masuda,R.: "Phylogenetic status of brown bears Ursus arctos of Asia : A preliminary result inferred from mitochondrial DNA control region sequences"Hereditas. 128. 277-280 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Masuda,R.: "Genetic characteristics of endangered Japanese golden eagles (Aquila chrysaetos japonica) based on mitochondrial DNA D-loop sequences and karyotypes"Zoo Biology. 17. 111-121 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata,J.: "Genetic variation and population structure of the Japanese sika deer (Cervus nippon) in Hokkaido Island, based on mitochondrial D-loop sequences"Molecular Ecology. 7. 871-877 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Matsuhashi,T.: "Microevolution of the mitochondrial DNA control region in the Japanese brown bear (Ursus arctos) population"Molecular Biology and Evolution. 16. 676-684 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata,J.: "Two genetically distinct lineages of the sika deer, Cervus nippon, in Japanese islands : Comparison of mitochondrial D-loop region sequences"Molecular Phylogenetics and Evolution. 13. 511-519 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 増田隆一: "ヒグマの遺伝的多様化と北海道への渡来"月刊海洋. 32. 214-218 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 増田隆一: "地球・人間・環境シリーズ 環境保全・創出のための生態工学(分担執筆)"丸善. 238 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 増田隆一: "希少猛禽類の保護の現状と新しい調査法(分担執筆)"技術情報協会(印刷中). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Masuda, R: "Phylogenetic status of brown bears Ursus arctos of Asia : A preliminary result inferred from mitochondrial DNA control region sequences."Hereditas. 128. 277-280 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Masuda, R.: "Genetic characteristics of endangered Japanese golden eagles(Aquila chrysaetos japonica)based on mitochondrial DNA D-loop sequences and karyotypes."Zoo Biology. 17. 111-121 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata, J.: "Genetic variation and population structure of the Japanese sika deer(Cervus nippon)in Hokkaido Island, based on mitochondrial D-loop sequences."Molecular Ecology. 7. 871-877 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Matsuhashi, T.: "Microevolution of the mitochondrial DNA control region in the Japanese brown bear(Ursus arctos)population."Molecular Biology and Evolution. 16. 676-684 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata, J.: "Two genetically distinct lineages of the sika deer, Cervus nippon, in Japanese islands : Comparison of mitochondrial D-loop region sequences."Molecular Phylogenetics and Evolution. 13. 511-519 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Masuda, R.: "Genetic diversification of the brown bear and the immigration into Hokkaido(in Japanese)."Kaiyo. 32. 214-218 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Masuda, R.: "Earth-Human-Environment : Ecological Technology(in Japanese)"Masuzen. 238 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Masuda, R.: "Status of Conservation of Endangered Raptors and New Servey Methods(in Japanese)"Gijutsu-joho-kyokai(in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 増田隆一: "ヒグマの遺伝的多様化と北海道への渡来"月刊海洋. 32. 214-218 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kurose, N.: "Karyological differentiation between two closely related mustelids, the Japanese weasel Mustela itatsi and the Siberian weasel Mustela sibirica"Caryologia. 53. 269-275 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kurose, N.: "Intrageneric diversity of the cytochrome b gene and phylogeny of Eurasian species of the genus Mustela (Mustelidae, Carnivora)"Zoological Science. 17. 673-679 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Oshida, T.: "Phylogeny and zoogeograhy of six squirrel species of the genus Sciurus (Mammalia, Rodentia), inferred from cytochrome b gene sequences"Zoological Science. 17. 405-409 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Oshida, T.: "Phylogenetic relationships among six flying squirrel genera, inferred from mitochondrial cytochrome b gene sequence"Zoological Science. 17. 485-489 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Oshida, T.: "Phylogenetic relationships among Asian species of Petaurista (Rodentia, Sciuridae), inferred from mitochondrial cytochrome b gene sequences"Zoological Science. 17. 123-128 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] T. Matsuhashi: "Microevolution of the mitochondrial DNA control region in the Japanese brown bear (Ursus arctos) population"Molecular Biology and Evolution. 16. 676-684 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] J. Nagata: "Two genetically distinct lineages of the sika deer, Cervus nippon, in Japanese islands : Comparison of mitochondrial D-loop region sequences"Molecular Phylogenetics and Evolution. 13. 511-519 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] N. Kurose: "Phylogeographic variation in two mustelines, the least weasel Mustela nivalis and the ermine M. erminea of Japan, based on mitochondrial DNA control region sequences"Zoological Science. 16. 971-977 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] N. Kurose: "Intraspecific variation of mitochondrial cytochrome b gene sequences of the Japanese marten Martes melampus and the sable Martes zibellina (Mustelidae, Carnivora Mammalia) in Japan"Zoological Science. 16. 693-700 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 増田隆一: "遺伝子から検証する哺乳類のブラキストン線"哺乳類科学. 39. 323-328 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 増田隆一: "ブラキストン線(津軽海峡)に関する食肉類の生物地理と遺伝的特徴"哺乳類科学. 39. 351-358 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 増田隆一: "地球・人間・環境シリーズ 環境保全・創出のための生態工学"丸善(分担執筆). 238 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Masuda,R.: "Phylogenetic status of brown bears Ursus arctos of Asia: A preliminary result inferred from mitochondrial DNA control region sequences." Hereditas. 128. 277-280 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Masuda,R.: "Genetic characteristics of endangered Japanese golden eagles(Aquila chrysaetos japonica) based on mitochondrial DNA D-loop sequences and karyotypes." Zoo Biology. 17. 111-121 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Noro,M.: "Molecular phylogenetic inference of the woolly mammoth Mammuthus primigenius,based on complete sequences of mitochondrial cytochrome b and 12S ribosomal RNA genes." Journal of Molecular Evolution. 46. 314-326 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Nagata,J.: "Genetic variation and population structure of the Japanese sika deer(Cervus nippon) in Hokkaido Island,based on mitochondrial D-loop sequences." Molecular Ecology. 7. 871-877 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Takahashi,M.: "Sexing of carcass remains of the Sika deer(Cervus nippon) using PCR amplification of the Sry gene." Journal of Veterinary Medical Science. 60. 713-716 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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