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Analysis of transcriptional regulation in chloroplasts by DNA-associated transcrition factors by means of chloroplast transformation

Research Project

Project/Area Number 10640629
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 植物生理
Research InstitutionKyoto Prefectural University (2000-2001)
Kyoto University (1998-1999)

Principal Investigator

SHIINA Takashi  Faculty of Human Environment, Kyoto Prefectural University, Associate Professor, 人間環境学部, 助教授 (10206039)

Project Period (FY) 1998 – 2000
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥3,200,000 (Direct Cost: ¥3,200,000)
Fiscal Year 2000: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 1999: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 1998: ¥1,900,000 (Direct Cost: ¥1,900,000)
Keywordschloroplast / transcription factor / sigma factor / chloroplast transformation / promoter / psbA / psbD / PEP / NEP / 転写 / 形質転換 / RNAポリメラーゼ
Research Abstract

Chloroplast-encoded photosynthesis genes are transcribed by eubacterial-type RNA polymerase (PEP). Thus it has been considered that transcription factors involved in the regulation of PEP would be homologous to the bacterial factors. Hewever, arabidopsis genome project revealed that neither chloroplast genome nor nuclear genome encoded any prokaryotic transcription factor. In order to identify and characterize the chloroplast transcription factors involved in the regulation of PEP, novel biochemical and/or genetic approaches specific for chloroplasts should be employed. In this study, I identified novel nuclear-encoded chloroplast factors that specifically interact with the region 4of chloroplast sigma factor, Sig1. In vitro transcription analysis of the chloroplast psbA promoter revealed that promoter recognition property of PEP was developmentally regulated in wheat seedlings. In young chloroplasts, the -35 element was essential for transcription initiation from the psbA promoter, but not in mature chloroplasts. It was also suggested that chloroplast sigma factor, Sig5 would be involved in the blue light-dependent activation of transcription at the psbD light-responsive promoter. Furthermore, I employed chloroplast transformation technique to study the trancriptional regulation in chloroplasts and revealed that the transcription initiation at the psbA promoter required the -35 element in tobacco. Finally, I visualized stromules in transplastomic plants expressing GFP in chloroplasts and characterized their physiological functions.

Report

(4 results)
  • 2001 Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (46 results)

All Other

All Publications (46 results)

  • [Publications] Siina, T., Allison, L., Maliga, P.: "rbcL Transcript levels in tabacco plastids are dependent of light : reduced dark transcription rate is compensated by increased mRNA stability"Plant Cell. 10. 1713-1722 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nakahira, Y., Baba, K., Yoneda, A., Shiina, T., Toyoshima, Y.: "Circadian clock-regulated transcription of the psbD light-responsive promoter (psbD LRP) in wheat chloroplasts"Plant Physiol.. 118. 1079-1088 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shiina, T., Allison, L., Maliga, P.: "Increased mRNA stability compensates for reduced dark rbcL transcription rates in tobacco plastids"In Photosynthesis : Mechanisms and Effects. IV. 2991-2994 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nakahira, Y., Morikawa, K., Shiina, T., Toyoshima, Y.: "Circadian-regulated transcription of the psbD light-responsive promoter(psbD LRP)in wheat chloroplasts"In Photosynthesis : Mechanisms and Effects. IV. 2821-2824 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Satoh, J., Baba, K., Nakahira, Y., Tsunayama, Y., Shiina, T., Toyoshima, Y.: "Developmental stage-specific multi-subunit plastid RNA polymerases (PEP) in wheat"Plant J.. 18. 407-416 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Satoh, J., Baba, K., Morikawa, K., Ito, S., Shiina, T., Toyoshima, Y.: "Selective activation of the psbA and psbD promoters in matured wheat chloroplasts"In Photosynthesis : Mechanisms and Effects. IV. 2967-2970 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Morikawa, K., Ito, S., Tsunayama, Y., Nakahira, Y., Shiina, T., Toyoshima, Y.: "Circadian-regulated expression of a nudear-encoded plastid sigma factor gene (SigA) in wheat seedlings"FEBS Lett.. 451. 275-278 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shiina, T., Hayashi, K., Ishii, N., Morikawa, K., Toyoshima, Y.: "Chloroplast tubules visualized in transplastomic plants expressing gleen fluctescent protein"Plant Cell Physiol.. 41. 367-371 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ogihara, Y., Isono, K.et al.: "Chinese spring wheat (Triticum aestiuumL.)chloroplast genome. Complete sequence and contig clones"Plant Mol. Biology Reporter. 18. 243-253 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shiina, T., Hayashi, K., Ishii, N.et al.: "Characterization of stramues visualized in transplastomic plants expressing green fluorescent protein (GFP)"Proceedings of XIIth International Photosynthesis Congress. S23-004. 1-6 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Morikawa, K., Murakami, S., Tsunoyama, et al.: "Regulation of plastid gene transcription by sigma factor binding protein"Proceedings of XIIth International Photosynthesis Congress. S24-019. 1-4 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Tsunoyama, Y., Morikawa, K., et al.: "Analysis of promoter selectivity of plastid sigma factors in Arabidopsis thaliana"Proceedings of XIIth International Photosynthesis Congress. S24-011. 1-4 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Iwata, T., Tsuchida, Y., Shiina, T., Toyoshima, Y.: "Ploes of the psbL protein in election transfer on the donor side of PSII"Proceedings of XIIth International Photosynthesis Congress. S22-030. 1-4 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ogihara, Y., Isono, K., et al.: "Structural features of a wheat plastome as revealed by complete sequencing of chloroplast DNA"Mol. Genet. Genomics.. 266. 740-746 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Morikawa, K., Shiina, T., Murakami, S., Toyoshima, Y.: "Novel nudear-encoded proteins interacting with a plastid sigma factor, Sigl, in Arabidopsis thaliana"FEBS Lett.. 314. 300-304 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Tsunoyama, Y., Morikawa, K., Shiina, T., Toyoshima, Y.: "Plastid a factor Sig5 is expressed under the control of blue-light to activate the psbD light responsive promoter in A. thaliana"FEBS Lett.. (in press). (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 豊島喜則, 椎名隆: "オルガネラの転写因子 植物ゲノム機能のダイナミズム-転写因子..."シコプリンガー,フェアラーク社. 28 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 豊島喜則, 椎名隆: "パーティクルガンによる遺伝子の導入 生物工学実験書"培風館. 6 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shiina T., Allison L. and Maliga P.: "rbcL transcript levels in tobacco plastids are independent of light : reduced dark transcription rate is sompensated by increased mRNA stability"Plant Cell. 10. 1713-1722 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nakahira Y., Baba K., Yoneda A., Shiina T. and Toyoshima Y.: "Circadian clock-regulated transcription of the psbD light-responsive promoter (psbD LRP) in wheat chloroplasts"Plant Physiol.. 118. 1079-1088 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shiina T., Allison L. and Maliga P.: "Increased mRNA stability conpensates for reduced dark psbL transcription rates in tobacco plastids"In Photosynthesis : Mechanisms and Effects (Garab, G eds.) Kuwer Academic Publishers. Vol. IV. 2991-2994 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nakahira Y. Morikawa K. Shiina T., Toyoshima Y.: "Circadian-regulated transcription of the psbD light-responsive promoter (psbD LRP) in wheat chloroplasts"In Phostosynthesis : Mechanisms and Effects (Garab, G eds.) Kuwer Academic publishers. bol. IV. 2821-2824 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Satoh J., Baba K., Morikawa K., Ito S., Shiina T., Toyoshima Y.: "Selective activation of the psbA and psbD promoters in matured wheat chloroplasts"In Photosynthesis : Mechanisms and Effects (Garab, G eds.) Kluwer Academic publishers. Vol. IV. 2967-2970 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Satoh J., Baba K., Nakahira Y., Tsunoyama Y., Shiina T. and Toyoshima Y.: "Developmental stage-specific multi-subunit plastid RNA polymerases (PEP) in wheat"Plant J.. 18. 407-416 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Morikawa K., Itoh S., Tsunoyama Y., Nakahira Y., Shiina T. and Toyoshima Y.: "Circadian-regulated Expression of a nuclear-encoded plastid sigma factor gene (sigA) in wheat seedlings"FEBS Lett. 451. 275-278 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Siina T., Hayashi K., Ishii N., Morikawa K. and Toyoshima Y.: "Choloroplast tubules visualized in tranplastomic plants expressing green fluorescent protein"Plant Cell Physiol. 41. 367-371 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ogihara Y., Isono K., Kojima T., Endo A., Hanaoka M., Shiina T., Terachi T., Utsugi S., Murata M., Mori N., Takumi S., Ikeo K., Gojobori T., Murai R., Murai K., Matusoka Y., Ohnishi Y., Tajiri H. and Tsunewaki K.: "Chinese Spring wheat (Triticum gestivum L.) chloroplast genome : complete sequence and contig clones"Plant Molecular Biology Reporter. 18. 243-253 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shiina T., Hayashi K., Ishii N., Morikawa K., Iwai K., Yasuda H., Yamashita H., Toyoshima Y.: "Characterization of stromules visualized in transplastomic plants expressing green fluorescent protein (GFP)"Proceedings of XIIth International Photosynthesis Congress. S23-004. 1-6 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Morikawa K., Mirakami S., Tsunoyama Y., Shiina T., Toyoshima Y.: "Regulation of plastid gene transcription by sigma factor binding protein"Proceedings of XIIth International Photosynthesis Congress. S24-019. 1-4 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Tsunoyama Y., Morikawa K., Shiina T., Toyoshima Y.: "Analysis of promoter selectivity of plastid sigma factors in Arabidopsis thaliana"Proceedings of XIIth International Photosynthesis Congress. S24-011. 1-4 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Iwata T., Tsutida Y., Shiina T., Toyoshima Y.: "Roles of the PsbL protein in electron transfer on the donor side of PSII"Proceedings of XIIth International Photosynthesis Congress. S22-030. 1-4 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ogihara Y., Isono K., Kojima T., Endo A., Hanaoka M., Shiina T., Terachi T., Utsugi S., Murata M., Mori N., Takumi S., Ikeo K., Gojobori T., Murai R., Murai K., Matusoka Y., Ohnishi Y., Tajiri H. and Tsunewaki K.: "Structural features of a wheat plastome as revealed by complete sequencing of chloroplast DNA"Mol Genet Genomics. 266. 740-746 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Morikawa K., Shiina t., Murakami S., Toyoshima Y.: "Novel nuclear-encoded proteins interacting with a plastid sigma factor, Sig1, in Arabidopsis thaliana"FEBS Lett. 314. 300-304 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Tsunoyama Y., Morikawa K., Shiina T., Toyoshima Y.: "Plastid _factor Sig5 is expressed under the control of blue light to activate the psbD light responsive promoter in Arabidopsis thaliana"FEBS Lett. (in press). (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shiina,T.,Hayashi,K.,Ishii,N.,Morikawa,K.,Toyoshima,Y.: "Chloroplast tubules visualized in transplastomic plants expressing green fluorescent protein."Plant Cell Physiology. 41(3). 367-371 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Ogihara,Y.,Isono,K.,Kojima,T.,Endo,A.,Hanaoka,M.,Shiina,T., et al.: "Chinese Spring Wheat (Triticum uestivum L.) chloroplast genome : Complete sequence and contig clones."Plant Molecular Biology Reporter. 18(3). 243-253 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 佐藤淳子: "Developmemtal stage-specific multi-subunit plastid RNA polymerases(PEP) in wheat"Plant J. 18. 407-416 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 森川一也: "Circadian-regulated expression of a nuclear-encoded plastid sigma factor gene (sifA) in wheat seedlings"FEBS Lett.. 451. 275-278 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 椎名隆: "Chloroplast tubules visualized in transplastomic plants expressing green fluorescent protein"Plant Cell Physiol.. (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Shiina,T.: "rbcL transcript levels in tobacco plastids are independent of light:reduced dark transcription rate is compensated by increased mRNA stability" Plant Cell. 10. 1713-1722 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Nakahira,Y: "Circadian clock-regulated transcription of the psbD light-responsive promoter(psbDLRP)in wheat chloroplasts." Plant Physiol.118. 1079-1088 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Satoh,J.: "Two types of multi-subunit plastid RNA polymerase(PEP)function distinctly in wheat seedlings depending on developmental stage of cells" Plant J. (印刷中). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Morikawa,K,: "Circadian-regulated expressionof a nuclear-encoded plastid sigma factor gene (sigA)in wheat seedlings." FEBS Lett.(印刷中). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Shiina,T.: "Increased mRNA stability conpensates for reduced dark psbL transcription rates in tobacco plastids." Research in Photosynthesis. (印刷中). (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Nakahira,Y.: "Circadian-regulated transcription of the psbD light-responsive promoter(psbDLRP)in wheat chloroplasts." Research in Photosynthesis. (印刷中). (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Satoh,J.: "Selective activation of the psbA and psbD promoters in matured wheat chloroplasts." In Research in Photosynthesis. (印刷中). (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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