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Enhancement of thermostability of protein by reinforcement of subunit-subunit interaction

Research Project

Project/Area Number 10650782
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 生物・生体工学
Research InstitutionShinshu University

Principal Investigator

HACHIMORI Akira  Fac. of Textile Sci. and Tech. Shinshu University, Professor, 繊維学部, 教授 (30082811)

Project Period (FY) 1998 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 1999: ¥1,000,000 (Direct Cost: ¥1,000,000)
KeywordsInorganic pyrophosphatase / thermostability / site-directed mutagenesis / Thermophilic bacterium PS-3 / Bacillus subtilus / protein structure / Biotechnology / subunit-subunit interaction / サブユニット間相互作用
Research Abstract

In order to reveal the contribution of intra-subunit interaction on the thermostability of protein, inorganic pyrophosphatase (Ppase) from thermophilic bacterium PS-3 as a model protein was investigated and the following results were obtained.
1. His-118 and His 125, which locate in helix A, are important for both trimer-trimer interaction and structural integrity, whereas Trp-143 is important structurally. The trimer-trimer interaction is absolutely necessary for the thermostability of the PS-3 PPase.
2. Escherichia coli PPase is also thrmostable although its maximum temperature is 10 ℃ lower than that of PS-3 PPase. Thus we investigated the thermolabile PPase and we found it in Bacillus subtilis. We revealed the primary structure of B. subtilis PPase from the genomic DNA and found that not only the primary structure including the number of amino acid residues but also the quaternary structure are different from the soluble PPase so far studied. We concluded B. subtilis PPase is a membe … More r of new PPase family.
3. We revealed the primary structure of Bacillus stearothermophilus PPase through the study of both Edman degradation and genomic DNA. We found that it is completely identical with that of PS-3 PPase except for the shortage of 2 amino acid residues at C-terminus. Site-directed mutagenesis revealed that Tyr-46 and Tyr-140 are very important for the maintenance of correct structure of active site pocket.
4. PCR-mutagenesis classified the roles of 10 proline residues of PS-3 PPase into three groups; P39 and P69 have no contribution for the structural integrity. P14, P43 P69 and P116 are important for the secondary structure. P72, P100, P104 and P142 are important for the structural integrity.
5. Ser-89 are important for the structural integrity of PS-3 PPase, and its replacement with Glu and Asp enhanced the thermostability of the enzyme by 10 ℃.
6. The replacement of Arg-129, which locates in helix A necessary for trimer-trimer interaction, enhanced the thermostability of enzyme by 10 ℃. Less

Report

(3 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • Research Products

    (20 results)

All Other

All Publications (20 results)

  • [Publications] Aoki,M.: "Effect of replacement of His-118, His-125 and Trp-143 by alanine on the catalytic activity and subunit assembly of inorganic pyrophospjatase from thermophilic bacterium PS-3"Biochem.J.. 331. 143-148 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Shintani,T.: "Cloning and expression of a unique inorganic pyrophosphatase from Bacillus subtilis. Evidence for a new family of enzyme"FEBS Lett.. 439. 263-266 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 野村隆臣: "蚕絹糸腺リボソームの調整とその性質"日蚕雑. 40. 311-318 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sato,T.: "Primary structure, expression and site-directed mutagenesis of inorganic pyrophosphatase from Bacillus stearothermophilus"J. Biochem.. 125. 48-57 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Uchiumi,T.: "Interaction of sarcin/ricin domain of 23S ribosomal RNA with proteins L3 and L6"J. Biol.Chem.. 274. 681-686 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Uchiumi,T.: "Replacement of L7/L12.L10 protein complex in Escherichia coli ribosomes with the eukaryotic counterpart changes the specificity of elogation factor binding"J. Biol.Chem.. 274. 27578-27582 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Aoki, M., Uchiumi, T., E. and Hachimori, A.: "Effect of replacement of His-118, His-125 and Trp-143 by alanine on the catalytic activity and subunit assembly of inorganic pyrophospjatase from thermophilic bacterium PS-3."Biochem. J.. 331. 143-148 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Shintani, T., Uchiumi, T., Baykov, A. A., Lahti, R. and Hachimori, A.: "Cloning and expression of a unique inorganic pyrophosphatase from Bacillus subtilis. Evidence for a new family of enzyme."FEBS Lett.. 439. 263-266 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sato, T., Shinoda, H., H., Hachimori, A., Irie, M., Samejima, T.: "Primary structure, expression and site-directed mutagenesis of inorganic pyrophosphatase from Bacillus stearothermophilus"J. Biochem.. 125. 681-686 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Uchiumi, T., Sato, N., Wada, A. and Hachimori, A.: "Interaction of sarcin/ricin domain of 23S ribosomal RNA with proteins L3 and L6."J. Biol. Chem.. 274. 681-686 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Uchiumi, T., Hori, K., Nomura, T. and Hachimori, A.: "Replacement of L7/L12.L10 protein complex in Escherichia coli ribosomes with the eukaryotic counterpart changes the specificity of elogation factor binding."J. Biol. Chem.. 274. 27578-27582 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Aoki, M.,: "Effect of replacement of His-118, His125 and Trp-143 by alanine on the catalytic activity and subunit assembly of inorganic pyrophospjatase from thermophilic bacterium PC-3."Biochem. J.. 331. 143-148 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] Shintani, T.,: "Cloning and expression of a unique inorganic pyrophosphatase from Bacillus subtilis. Evidence for a new family of enzyme."FEBS Lett.. 439. 263-266 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] 野村隆臣: "蚕絹糸腺リボソームの調製とその性質"日蚕雑. 40. 311-318 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] Sato, T.: "Primary structure, expression and site-directed mutagenesis of inorganic pyrophosphatase from Bacillus stearothermophilus."J. Biochem.. 125. 48-57 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Uchiumi, T.: "Interaction of sarcin/ricin domain of 23S ribosomal RNA with proteins L3 and L6."J. Biol. Chem.. 274. 681-686 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Uchiumi, T.: "Replacement of L7/L12.L10 protein complex in Escherichida coli ribosomes with the eukaryotic counterpart changes the specificity of elogation factor binding."J. Biol. Chem.. 274. 27578-27582 (1099)

    • Related Report
      1999 Annual Research Report
  • [Publications] M.Aoki: "Effect of replacement of His-118,His-125, and Trp-143 by Ala on the catalytic activity and Subunit assembly of inorganic pyrophosphatase from thermophilic factor" Biochem.J.331. 143-148 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Shintani: "Cloning and expression of a unique inorganic pyrophosphatase from Bacillus subtilis ; Evidence for a new family of enzymes" FEBS Lett.439. 263-266 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Satoh: "Primary structure,expression,and site-directed mutagenesis of inorganic pyrophosphatase from Bacillus stearothevmophilus" J.Bischem.125. 48-57 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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