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Construction and Application of Supramolecular Assembles Having Regulation Systems for Their Activities

Research Project

Project/Area Number 10650844
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Synthetic chemistry
Research InstitutionTokyo Institute of Technology

Principal Investigator

IKEDA Hiroshi  Tokyo Institute of Technology, Graduate School of Bioscience and Biotechnology, Assistant Professor, 大学院・生命理工学研究科, 助手 (70201910)

Project Period (FY) 1998 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2001: ¥400,000 (Direct Cost: ¥400,000)
Fiscal Year 2000: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 1999: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 1998: ¥2,400,000 (Direct Cost: ¥2,400,000)
KeywordsSupermolecule / Artificial Enzyme / Cyclodextrin / Cooperative Effect / Regulation of Activity / Hydrolase / アロステリック / クラウンエーテル / 分子認識 / ベンゾイン縮合
Research Abstract

Natural enzymes have mechanisms to control their activities in response to the concentration of substrates, products or other effectors. In contrast, there have not been many reports of artificial enzymes that have mechanisms to control their activities, although many successful artificial enzymes with high catalytic activity or high substrate selectivity have been reported. Thus, an important area of research in the field of supramolecular chemistry is the development of chemical methods to control the activities of artificial enzymes.
In this project, we constructed new supramolecular assembles having regulation systems, such as an allosteric system.
1) We prepared cyclodextrin dimer (designated βCβH) that has a catalytic site located between two β-cyclodextrins and acts as an artificial hydrolase. βCβH shows homotropic allosteric-like effect.
2) Artificial holoenzymes for benzoin condensation were synthesized using thiazolio-appended β-cyclodextrin dimers. The dimer with an L-aspartic acid residue as a linker for connecting two β-cyclodextrin units caused 26-fold acceleration in the benzoin condensation, whereas the dimer with the linker of a L-glutamic acid residue caused only 7-fold acceleration, indicating that the linker length of the dimer is an important factor in this artificial holoenzyme.
3) β-cyclodextrin derivatives bearing a benzo-crown moiety at the primary- or secondary-hydroxy side were synthesized for molecular recognition toward tryptophan (Trp) in zwitterionic form. The secondary-hydroxy side modification was preferable to the primary-hydroxy side one for recognition of Trp, because the ammonium cation part of Trp was located at the secondary-hydroxy side of the cyclodextrin.

Report

(5 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (46 results)

All Other

All Publications (46 results)

  • [Publications] S.Usui: "Molecular Dynamics Conformational Search for the Factors that Determine Conformation of Modified Cyclodextrins"Supramol. Chem.. 9. 57-67 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S.Usui: "The Structure of Mono-(3-amino-3-deoxy)-a-cyclodextrin in Aqueous Solution. Molecular Dynamics and NMR Studies"J. Mol. Struct.. 442. 161-168 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Ikeda: "Allosteric Regulation in the Catalytic Aclivity of Cyclodextrin Dimer as an Artificial Hydrolase"Proceedings of 8th International Symposium on Molecular Recognition and Inclusion. 369-372 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] A.Ueno: "Guest-Responsive Eximer Fluorescence of β-Cyclodextrin Bearing a Pendant with Two Pyrene Moieties"Macromol. Rapid. Commun.. 19. 315-317 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.J.Schneider: "NMR Studies of Cyclodextrins and Cyclodextrin Complexes"Chem. Rev.. 98. 1755-1785 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S.Hamai: "^1H-NMR Investigation of Binding of 2-Methylnaphthalene to α-Cyclodextrin in D_2O Solution"J. Inclusion Phenom. Mol. Recognit. Chem.. 31. 265-273 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 池田 博: "シクロデキストリンの反応と分離・分析への応用"化学工学. 62. 585-589 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Kuwabara: "Phenolphthalein-Modified β-Cyclodextrin as a Molecule-Responsive Colorless-to-Color Change Indicator"J. Org. Chem.. 64. 8729-8735 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] A.Ueno: "Fluorescent Cyclodextrins Responsive to Molecules and Metal Ions"J. Org. Chem.. 64. 382-387 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Ikeda: "Thiamine-Appended Cyclodextrin Dimer as a Ligase Model"Proceedings ofthe 9th International Symposium on Cyclodextrin. 129-132 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Aoyagi: "Synthesis and Molecular Recognition Abilities of Modified γ-Cyclodextrins Bearing Two Pyrene Moieties"Proceedings ofthe 9th International Symposium on Cyclodextrin. 137-140 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Ikunaga: "The Effects of Avidin on Inclusion Phenomena and Fluorescent Properties of Biotin-ADnending Dansyl-Modified β-Cyclodextrin"Chem. Eur. J.. 5. 2698-2704 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] I.Suzuki: "Crown Ether-Tethered Cyclodextrins : Superiority of the Secondary-Hydroxyy Side Modification in Binding Tryptophane"J. Chem. Soc. Perkin Trans 2. 1705-1710 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Ikeda: "Artificial Holoenzyme for the Benzoin Condensation Using Thiazolio-Appended β-Cyclodextrin Dimer : The Effect of the Linker Length for Catalytic Activity"Tetrahedron Lett.. 41. 6483-6487 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Aoyagi: "Fluorescence Properties, Induced-Fit Guest Binding and Molecular Recognition Abilities of Modified γ-Cyclodextrins Bearing Two Pyrene Moieties"Bull. Chem. Soc. Jpn.. 74. 157-164 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K.Imamura: "Enhanced Binding Ability of β-Cyclodextrin Bearing Seven Hydrophobic Chains Each with a Hydrophilic End Group"Chem. Lett.. (in press). (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] A.Ueno: "Molecular and Supramolecular Photochemistry 8"Marcel Dekker, New York. 757 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S. Usui, H. Ikeda, et al.: "Molecular Dynamics Conformational Search for the Factors that Determine Conformation of Modified Cyclodextrins"Supramol. Chem.. 9. 57-67 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S. Usui, H. Ikeda, et al.: "The Structure of Mono-(3-amino-3-deoxy)-α-cyclodextrin in Aqueous Solution Molecular Dynamics and NMR Studies"J. Mol. Struct.. 442. 161-168 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Ikeda, et al.: "Allosteric Regulation in the Catalytic Activity of Cyclodextrin Dimer as an Artificial Hydrolase"Proceedings of 8th International Symposium on Molecular Recognition and Inclusion. 369-372 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] A. Ueno, H. Ikeda, et al.: "Guest-Responsive Eximer Fluorescence of β-Cyclodextrin Bearing a Pendant with Two Pyrene Moieties"Macromol. Rapid. Commun.. 19. 315-317 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. J. Schneider, H. Ikeda, et al.: "NMR Studies of Cyclodextrins and Cyclodextrin Complexes"Chem. Rev.. 98. 1755-1785 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S. Hamai, H. Ikeda, et al.: "^1H-NMR Investigation of Binding of 2-Methylnaphthalene to α-Cyclodextrin in D_2O Solution"J. Inclusion Phenom. Mol. Recognit. Chem.. 31. 265-273 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Ikeda, et al.: "Application of Cyclodextrins to Reactions, Separations, and Analyses"Kagakukougaku. 62. 585-589 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T. Kuwabara, H. Ikeda, et al.: "Phenolphthalein-Modified β-Cyclodextrin as a Molecule-Responsive Colorless-to-Color Change Indicator"J. Org. Chem.. 63. 8729-8735 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] A. Ueno, H. Ikeda, et al.: "Fluorescent Cyclodextrins Responsive to Molecules and Metal Ions. The Fluorescence Properties and Inclusion Phenomena of Na-Dansyl-L-Lysine-β-Cyclodextrin and Monensin-incorporated Na-Dansyl-L-Lysine-β-Cyclodextrin"J. Org. Chem.. 64. 382-387 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Ikeda, et al.: "Thiamine-Appended Cyclodextrin Dimer as a Ligase Model"Proceedings of the 9th International Symposium on Cyclodextrin. 129-132 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T. Aoyagi, H. Ikeda, et al.: "Synthesis and Molecular Recognition Abilities of Modified γ-Cyclodextins Bearing Two Pyrene Moieties"Proceedings of the 9th International Symposium on Cyclodextrin. 137-140 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T. Ikunaga, H. Ikeda, et al.: "The Effects of Avidin on Inclusion Phenomena and Fluorescent Properties of Biotin-Appending Dansyl-Modified β-Cyclodextrin"Chem. Eur. J.. 5. 2698-2704 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] I. Suzuki, H. Ikeda, et al.: "Crown Ether-Tethered Cyclodextrins : Superiority or the Secondary-Hydroxyl Side Modification in Binding Tryptophane"J. Chem. Soc. Perkin Trans. 2. 1705-1710 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Ikeda, et al.: "Artificial Holoenzyme for the Benzoin Condensation Using Thiazolio-Appended β-Cyclodextrin Dimer : The Effect of the Linker Length for Catalytic Activity"Tetrahedron Lett.. 41. 6483-6487 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T. Aoyagi, H. Ikeda, et al.: "Fluorescence Properties, Induced-Fit Guest Binding and Molecular Recognition Abilities of Modified γ-Cyclodextrins Bearing Two Pyrene Moieties"Bull. Chem. Soc. Jpn.. 74. 157-164 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] A. Ueno and H. Ikeda: "Supramolecular Photochemistry of Cyclodextrin Materials"In Molecular and Supramolecular Photochemistry 8, Marcel Dekker, New York. 461-503 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K. Imamura, H. Ikeda, et al.: "Enhanced Binding Ability of β-Cyclodextrin Bearing Seven Hydrophobic Chains Each with a Hydrophobic End Group"Chem. Lett.. (in press.). (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Aoyagi, et al.: "Fluorescence Properties, Induced-Fit Guest Binding and Molecular Recognition Abilities of Modified γ-Cyclodextrins Bearing Two Pyrene Moieties"Bull. Chem. Soc. Jpn.. 74. 157-164 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] K.Imamura, et al.: "Enhanced Binding Ability of γ-Cyclodextrin Bearing Seven Hydrophobic Chains Each with a Hydrophilic End Group"Chem. Lett.. (in press). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] A.Ueno, et al.: "Molecular and Supramolecular Photochemistry 8"V. Ramamurthy and Kirk S. Schanze Eds. 757 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] I.Suzuki,H.Ikeda, et al.: "Crown Ether-Tethered Cyclodextrins : Superiority of the Secondary-Hydroxyl Side Modification in Binding Tryptophan"J.Chem.Soc.,Perkin Trans.2. 1705-1710 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] H.Ikeda,Y.Horimoto, et al.: "Artificial Holoenzyme for the Benzoin Condensation Using Thiazolio-Appended β-Cyclodextrin Dimer"Tetrahedron Lett.. 41. 6483-6487 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] T.Aoyagi,H.Ikeda, et al.: "Fluorescence Properties, Induced-Fit Guest Binding and Molecular Recoginitio Abilities of Modified γ-Cyclodextrins"Bull.Chem.Soc.Jpn.. 74. 157-164 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] H.Ikeda: "Thiamine-Appended Cyclodextrin Dimer as a Ligase Model"Proceedings of the 9th International Symposium on Cyclodextrin. 129-132 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] T.Aoyagi: "Synthesis and Molecular Recognition Abilities of Modified γ-Cyclodextrins Bearing Two Pyrene Moieties"Proceedings of the 9th International Symposium on Cyclodextrin. 137-140 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] A.Ueno: "Fluorescent Cyclodextrins Responsive to Molecules and Metal Ions"J. Org. Chem.. 64. 382-387 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] T.Ikunaga: "The Effects of Avidin on Inclusion Phenomena and Fluorescent Properties of Biotin-Appending Dansyl-Modified β-Cyclodextrin"Chem. Eur. J.. 5. 2698-2704 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] H.Ikeda: "Thiamine-Appended Cyclodextrin Dimer as a Ligase Model" Proceedings of the 9th International Symposium on Cyclodextrin. (印刷中).

    • Related Report
      1998 Annual Research Report
  • [Publications] K.Imamura: "Synthesis of Flexible Molecular Tube and Its Guest-Binding Ability" Proceedings of the 9th International Symposium on Cyclodextrin. (印刷中).

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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