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Comparative and Biochemical Studies on Periplasmic Alcohol Oxidase Systems in Pseudomonads and Acetic Acid Bacteria

Research Project

Project/Area Number 10660091
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionYamaguchi University

Principal Investigator

MATSUSHITA Kazunobu  Faculty of Agriculture, Yamaguchi University, Professor, 農学部, 教授 (50107736)

Co-Investigator(Kenkyū-buntansha) 松下 一信  山口大学, 農学部, 教授 (50107736)
Project Period (FY) 1998 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 1999: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 1998: ¥2,300,000 (Direct Cost: ¥2,300,000)
KeywordsQuinoprotein / Quinohemoprotein / Alcohol Dehydrogenase / Azurin / Pseudomonas putida / Acetic acid bacteria / Cyanide-insensitive electron transport / Ubiquinol oxidation reaction
Research Abstract

There are different quinoprotein or quinohemoprotein alcohol dehydrogenases (ADH) in periplasm of pseudomonads and acetic acid bacteria, both of which function similarly as a primary dehydrogenase of the alcohol oxidase respiratory chain. However, both ADHs are different in terms of their localization and electron transfer reaction. In this study, the structure and function of type II ADH- and type III ADH-dependent electron transport systems of Pseudomonas putida and Gluconobacter suboxydans, respectively, was investigated comparatively.
1) Type II ADH of P. putida was purified together with a blue copper protein, azurin, from the soluble fraction of P. putida and then the reaction between both proteins was examined by kinetic, flouorometric and redox titration analyses. As a result, the electron transfer between both proteins was shown to occur by a hydrophobic interaction and also by a freely reversible on and off binding process.
2) Furthermore, by reconstituting alcohol oxidase activity on the membrane vesicles and also with the purified cytochrome oxidase, cyanide-sensitive alcohol oxidase system was shown to be composed of ADH, azurin, and cytochrome oxidase. In addition, a cytochrome was shown to be present in the membrane and also to possibly be involved in cyanide-insensitive respiratory chain.
3) Type III ADH of G. suboxydans, besides ubiquinone reduction activity, was shown to have ubiquinol oxidation activity, which functions separated from the site of ubiquinone reduction. Furthermore, this ADH was also shown to be related to cyanide-insensitive ubiquinol oxidase activity.
4) Type II ADH of P. putida was crystallized and then the structure was successfully determined at 1.9 A with X ray crystallographic analysis. However, even though already crystallized, the structure of G. suboxydans ADH was not determined for the duration of this study.

Report

(3 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • Research Products

    (24 results)

All Other

All Publications (24 results)

  • [Publications] J.Frebortova et al.: "Quinoprotein alcohol dehydrogenase of acetic acid bacteria:Kinetic study on the Purified from Acetobacter methanolicus"Biosci.Biotech.Biochem.. 61. 459-465 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] J.Frebortova et al.: "Intramolecular electron transport in quinoprotein alcohol dehydrogenase of Acetobacter methanolicus:A redox-titration study"Biochim.Biophys.Acta. 1363. 24-34 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K.Matsushita et al.: "The quinohemoprotein alcohol dehydrogenase of Giuconobacter suboxydans has ubiquinol oxidation activity at a site different from ubiquinone reduction site"Biochim.Biophys.Acta. 1409. 154-164 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K.Matsushita et al.: "Electron transfer from quinohemoprotein alcohol detlydrogenase to blue copper protein azurin,in the oxidase respiratory chain of Pseudomonas putida NK5"Biochemistry. 38. 6111-6118 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 山田守、松下一信: "キノプロテインおよびキノヘモプロテイン脱水素酵素の分子内および分子間電子移動"生化学. 71. 413-428 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Zhi-wei Chen et al.: "Crystallization and preliminary diffraction studies of two quinoprotein alcohol dehydrogenases(ADHs):a soluble monomeric ADH from Pseudomonas putida HK5(ADH-IIB)and a heterotrimeric membrane-bound ADH from Gluconobacter suboxydans(ADH-GS)"Acta Cryst.D. 55. 1993-1936 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 松下一信(共著): "新版微生物学実験法:5.7細胞活性の測定"講談社サイエンティフィク(杉山純多ら編). 324 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 松下一信(共著): "広川タンパク質化学第4巻酵素4.1オキシドレダクターゼ アルコールデヒドロゲナーゼ(キノプロテイン)"(広川書店)野崎光洋(編). 353 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] J. Frebortova, K. matsushita, T. Yakushi, H. Toyama & O. Adachi: "Quinoprotein alcohol dehydrogenase of acetic acid bacteria : Kinetic study on the enzyme purified from Acetobacter methanolicus"Biosci. Biotech.. 61. 459-465 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Frebortova, K. Matsushita, H. Arata & O. Adachi: "Intramolecular electron transport in quinoprotein alcohol dehydrogenase of Acetobacter methanolicus : A redox-titration study"Biochim. Biophys. Acta. 1363. 24-34 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K. Matsushita, T. Yakushi, H. Toyama, O. Adachi, H. Miyoshi, E. Tagami, & K. Sakamoto: "The quinohemoprotein alcohol dehydrogenase of Gluconobacter suboxydans has ubiquinol oxidation activity at a site different from the ubiquinone reduction site"Biochim. Biophys. Acta. 1409. 154-164 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K. Matsushita, T. Yamashita, N. Aoki, H. Toyama, & O. Adachi: "Electron transfer from quinohemoprotein alcohol dehydrogenase to blue copper protein azurin in the alcohol oxidase respiratory chain of Pseudomonas putida HK5"Biochemistry. 38. 6111-6118 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] M. Yamada & K. Matsushita: "Intra- and intermoleuclar electron transfer in quinoprotein and quinohemoprotein dehydrogenases (in Japanese)"Seikagaku. 71. 413-428 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Zhi-wei Chen, Petra Baruch, F. Scott Mathews, K. Matsushita, T. Yamashita, H. Toyama & O. Adachi: "Crystallization and preliminary diffraction studies of two quinoprotein alcohol dehydrogenases (ADHs) : a soluble monomeric ADH from Pseudomonas putida HK5 (ADH-IIB) and a heterotrimeric membrane-bound ADH from Gluconobacter suboxydans (ADH-GS)"Acta Cryst. D. 55. 1933-1936 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] H.Miyoshi et al.: "Topographical characterization of the ubiquinone reduction site of glucose dehydrogenase of in Escherichia coli using depth-dependent fluorescent inhibitors"Biochim.Biophys.Acta. 1412. 29-36 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] K.Matsushita et al.: "Electron transfer from quinohemoprotein alcohol dehydrogenase to blue copper protein azurin,in the alcohol oxidase respiratory chain of Pseudomonas putida HK5"Biochemistry. 38. 6111-6118 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Zhi-wei Chen et al.: "Crystallization and preliminary diffraction studies of two quinoprotein alcohol dehydro-genases(ADHs): a soluble monomeric ADH from Pseudomonas putida HK5(ADH-IIB) and a heteratrim*ric membrane bound ADH from Gluconobacter suboxydans(ADH-GS)"Acta Cryst.D. 55. 1933-1936 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] M.D.Elias et al.: "Functions of amino acid residues in the active site of Esherichia coli PQQ-containing quinoprotein glucose dehydrogenase"J.Biol.Chem.. 275. in press (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] 山田守、松下一信: "キノプロテインおよびキノヘモプロテイン脱水素酵素の分子内および分子間電子移動"生化学. 71. 413-428 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 松下一信(共著): "新版微生物学実験法:5.7細胞活性の測定"講談社サイエンティフィク(杉山純多ら編). 324 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 松下一信(共著): "広川タンパク質化学第4巻酵素4.1オキシドレダクターゼ アルコールデヒドロゲナーゼ(キノプロテイン)"(広川書店)野崎光洋ら(編). 353 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] J.Frebortova et al.: "Intramolecular electron transport in quinoprotein alcohol dehydrogenase of Acetobacter methanolicus:A redox-titration study" Biochim.Biophys.Acta. 1363. 24-34 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] O.Adachi et al.: "Characterization of quinohemoprotein amine dehydrogenase from Pseudomonas putida" Biosci.Biotech.Biochem.62(3). 469-478 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] K.Matsushita et al.: "The quinohemoprotein alcohol dehydrogenase of Gluconobacter suboxydans has ubiquinol oxidation activity at a site different from the ubiquinone reduction site" Biochim.Biophys.Acta. 1409. 154-164 (1999)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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