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DNA Polymorphism from Forensic samples and preservation of DNA in trace amount

Research Project

Project/Area Number 10670401
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionJuntendo University

Principal Investigator

ITOH Yukio  Juntendo University, Department of Forensic Medicine school of medicine, Assistant Professor, 医学部・法医学, 講師 (70053345)

Co-Investigator(Kenkyū-buntansha) KOBAYASHI Ryo  Tokyo Medical University, Department of Microbiology, Assistant Professor, 微生物学, 講師 (40146775)
Project Period (FY) 1998 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥2,600,000 (Direct Cost: ¥2,600,000)
Fiscal Year 2000: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 1999: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1998: ¥1,100,000 (Direct Cost: ¥1,100,000)
KeywordsWhole genome amplification / Primer extension preamplification(PEP) / DNA polymorphism / Blood group genotypes / D1S80 / THO1 / PCR / Sample preservation / PCR産物 / 性別判定 / 保存 / 塩基配列 / ABO式変異型 / 血痕 / 精液斑 / VNTR / STR
Research Abstract

Primer extension preamplification (PEP) is a useful method for whole genome amplification, which makes it possible to copy a sufficient amount of template DNA for several PCR assays. In the practice of forensic analysis, small DNA samples are occasionally analyzed once or twice by PCR.To obtain more accurate data for positive individual identification, more DNA analyses and sample preservation for additional analyses are desirable.
After PEP reaction, a small aliquot of the PEP product was employed in several PCR analyses and the remaining product could be preserved for additional analyses. The purpose of this study was to describe the comparison of all typing determined by PCR and PEP-PCR whether they are typed correctly.
1)The results of PCR analyses of various loci, i. e. , MCT118, TH01, HLA DQα, LDLR, GYPA, HBGG, D7S8, GC, sex determining region, ABO blood group genotyping and Lewis genotyping, from the PEP product preserved were consistent with those of PCR analyses from the original DNA samples. The reliable quantity of the original DNA sample used for PEP reaction was similar to that with which it was possible to perform PCR analysis of the DNA sample.
2)Our findings show that application of the PEP method to limited amounts of forensic DNA samples is useful to obtain additional information and to independently confirm the results of other PCR-based analysis methods.

Report

(4 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (27 results)

All Other

All Publications (27 results)

  • [Publications] Itoh,Y., Kobayashi,R.: "Evaluation of ABO and Lewis genotypes using primer extension preamplification"Forens Sci Int. 13. 139--141 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh,Y.,Iizuka,N.,Tsushima,H.,Kobayashi,R.: "Discrepant results of ABO blood grouping from highly putrefied semen obtained by serologic and PCR techniques"Progress in Forensic Genetics. 8. 548-551 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagao,K.,Itoh,Y.Fujime,S.: "Influence of Lewis blood group genotypes for CA19-9 leveles in urine and serum from urologic disease"Progress in Forensic Genetics. 8. 574-577 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 伊藤幸夫,小林了: "細菌に汚染された精液からのDNA分析と解離試験による血液型判定"DNA多型. 8. 292-294 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 伊藤幸夫,小林了,対馬秀子,飯塚直人: "血液と尿沈査から抽出したDNAを用DNA多型の不一致について"日法医誌. 54/1. 86 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 伊藤幸夫,小林了,長尾慶治: "尿試料からのSTR型判定について"第9回日本DNA多型学会学術集会抄録集. 114 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh, Y., Kobayashi, R.: "Evaluation of ABO and Lewis genotypes using primer extension preamplification."Forens Sci Int. 13. 139-141 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh, Y., Iizuka, N., Tsushima, H., Kobayashi, R.: "Discrepant results of ABO blood grouping from highly putrefied semen obtained by serologic and PCR techniques"Progress in Forensic Genetics. 8. 548-551 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagao, K., Itoh, Y.Fujime, S.: "Influence of Lewis blood group genotypes for CA19-9 leveles in urine and serum from urologic disease"Progress in Forensic Genetics. 8. 574-577 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh, Y., Kobayashi, R.: "Determination of blood groups on semen contamined with microorganism by DNA analysis and elution technique"DNA polymorphism. 8. 292-294 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh, Y., Kobayashi, R., Tsushima, H., Iizuka, N.: "Incompatibility of DNA polymor phism with DNA extracted from blood and urine sediment"Jpn J Leg Med. 54. 86 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh,Y.,Kobayashi,R.: "Evaluation of ABO and Lewis genotypes using primer extension preamplification"Forens Sci Int. 13. 139-141 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Itoh,Y.,Iizuka,N.,Tsushima,H.,Kobayashi,R.: "Discrepant results of ABO blood grouping from highly putrefied semen obtained by serologic and PCR techniques"Progress in Forensic Genetics. 8. 548-551 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nagao,K.,Itoh,Y.Fujime,S.: "Influence of Lewis blood group genotypes for CA19-9 leveles in urine and serum from urologic disease"Progress in Forensic Genetics. 8. 574-577 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 伊藤幸夫,小林了: "細菌に汚染された精液からのDNA分析と解離試験による血液型判定"DNA多型. 8. 292-294 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 伊藤幸夫,小林了,対馬秀子,飯塚直人: "血液と尿沈査から抽出したDNAを用DNA多型の不一致について"日法医誌. 54/1. 86 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Itoh, Y., Kobayashi, R.: "Comparison of ABO blood grouping from bloodstains by serological and PCR techniques."Proceedings of 6th Indo Pacific Congress on Legal Medicine and Forensic Science.. 595-598 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kobayashi, R., Itoh, Y.: "Analyses of an allele over 42 at the D1S 80 locus"Proceedings of 6th Indo Pacific Congress on Legal Medicine and Forensic Science. 712-715 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 伊藤幸夫、小林了: "Whole genome amplificationによるABO式及びLewis式血液型関連糖移酵素の遺伝子診断"DNA多型. 7. 237-240 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 長尾慶治、藤目真、伊藤幸夫: "膀胱腫瘍におけるCA19-9値とLEWIS式血液型との関連,"DNA多型. 7. 254-257 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 伊藤幸夫、小林了: "精液からのABO式血液型判定に困難をきたした1事例(続報)"日法医誌. 53/1. 59 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Itoh, Y., Kobayashi, R.: "Evaluation of ABO and Lewis genotypes using primer extension preamplification"Rechtsmedizin. 9/supple. A27 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 佐藤耕一,高橋健一,伊藤幸夫,小林了: "Primer Extension Preamplification(PEP)法を用いたDNA型判定について-型判定の正確さと検出限界の検討" 日法医誌. 52/3. 184-190 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 伊藤幸夫,小林了: "Primer Extension Preamplification(PEP)法を用いた血液型判定について" 日法医誌. 52/補冊. 77 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kobayashi R,Iizuka N,Tsushima H,Itoh Y: "Comparative Analysis of ABO Typing by Both Serological and DNA Analyses from Highly Putrefied Semen" Progress in Forensic Genetics. 7. 103-105 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Itoh Y,Kobayashi R,Iizuka N: "DNA analysis of ABO Blood Group Variants A3,Aend and Bm" Progress in Forensic Genetics. 7. 204-206 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 伊藤幸夫,小林了: "Whole genome amplificationによるABO式及びLewis式血液型関連糖転移酵素の遺伝子診断" 日本DNA多型学会 学術集会抄録集. 第7回. 80 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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