• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Haplotype analysis of a de novo allele at the STR locus

Research Project

Project/Area Number 10670404
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionOsaka Medical College

Principal Investigator

TAMURA kiyoshi  Faculty of Medicine, Osaka Medical College, Research Associate, 医学部, 助手 (50207239)

Co-Investigator(Kenkyū-buntansha) NISHIO Hajime  Faculty of Medicine, Osaka Medical College, Assistant Professor, 医学部, 講師 (90253260)
MIYAZAKI Tokiko  Faculty of Medicine, Osaka Medical College, Research Associate, 医学部, 助手 (60084919)
Project Period (FY) 1998 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1999: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 1998: ¥900,000 (Direct Cost: ¥900,000)
KeywordsSTR / DNA / polymorphism / VWF / mutation / de novo / vW
Research Abstract

We have detected an unusual allele (de novo allele) at the von Willebrand factor gene (Vwf) in the paternity case (trio). The unusual allele at the child was found not to derive from the parents. Another two STRs within the same intron (intron 40) at Vwf of allowed us to analyze the haplotype consisting of the three STRs. We examined base sequence for the de novo allele on haplotype analysis of three STR regions. The de novo allele of the child was the result of a mutation in allele at the Vwf locus gained one repeat unit at the paternal longer allele. In addition, we have analyzed allele frequency distributions and sequencing data at the Vwf locus. Eight different alleles were identified on the tested. All allele sequenced so far showed the same basic repeat structure TCTA(TCTG)ィイD24ィエD2(TCTA)ィイD210-16ィエD2TCCA TCTA except allele14 which revealed a strongly different sequence structure. The allele 14 has only 3 regular repeats (TCTA) on either side of a variant repeat. We observed the allele 14 at 3'-flanking region by structure variants caused by T to C transitio. The results obtained in this study demonstrated that the haplotype analysis is a useful method at a analysis of a de novo mutation where the parents inherited could not determined.

Report

(3 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • Research Products

    (8 results)

All Other

All Publications (8 results)

  • [Publications] 田村 明敬: "vWF-STRにみられたde novoアリールのハプロタイプ解析"DNA多型. 6. 46-49 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tamura, A.: "Determination of the Repeat Structure of de novo alleles observed in Three STRs (FGA, HUMTH01, vWF)"6th Indo Pacific Congress on Legal Medicine and Forensic Science. 695-697 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Akiyoshi TAMURA: "Haplotype analysis of a de novo alleles at av WF STR locis using flanking STR locis using flanking STR loei"Legal Medicine. 1. 188-192 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Akiyoshi TAMURA: "Haplotype analysis of a de novo allele at the VWF-STR locus"DNA polymorphism. Vol.6. 46-49 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Akiyoshi TAMURA: "Determination of the Repeat Structure of de novo alleles observed in Three STRs (FGA. HUMTH01. VWF)"6th Indo Pacific Congress on Legal Medicine and Forensic Science. 695-697 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Akiyoshi TAMURA: "Haplotype analysis of a de novo allele at VWF-STR locus using flanking STR loci"Legal Medicine. Vol.1. 188-192 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Akiyoshi TAMURA: "Haplotyne analysis of a de novo allele at a vWF STR locus using,flanking STR loci"Legal Medicine. Vol.1.No3. 188-192 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 田村 明敬: "vWF-STRにみられた de novoアリールのハプロタイプの解析" DNA多型. 6. 46-49 (1998)

    • Related Report
      1998 Annual Research Report

URL: 

Published: 1998-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi