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Physiolozical role and biosynthesis of D-aminoacids in eukanyote

Research Project

Project/Area Number 10680607
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

YOSHIMURA Tohru  Institute for Chemical Research, Kyoto University Associate Professor, 化学研究所, 助教授 (70182821)

Co-Investigator(Kenkyū-buntansha) ESAKI Nobuyoshi  Institute for Chemical Research, Kyoto University Professor, 化学研究所, 教授 (50135597)
Project Period (FY) 1998 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 1999: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1998: ¥1,600,000 (Direct Cost: ¥1,600,000)
KeywordsD-aminoacid / D-serine / D-alanine / racemase / 分裂酵母 / カイコ / 真核細胞
Research Abstract

D-Amino acids are indispensable for eubacteria as components of the peptidoglycans of their cell walls. Although several D-amino acids were found as components of opioid-like peptides and antibiotics such as cyclosporin A, little attention has been paid to the physiological function of D-amino acid in eukaryotes.However, recent advances in analytical techniques have enabled the demonstration of D-amino acid in various animals including mammals. In this work, we have studied the enzymes which are involved in the D-amino acid biosynthesis in eukaryote. We found that pyridoxal phosphate-dependent serine racemase occurs in the insect. The enzyme was partially purified from pupae of silkworm, Bombyx mori, and its properties were studied. This is the first report of the occurrence of serine racemase in eukaryotes producing D-serine. We partially purified and characterizde the alanine racemase from the hepatopancreas of the black tiger prawn, Penaeus monodon. The enzyme was immunochemically distinguished from alanine racemase from bacteria. We found that monovalent anions are involved in the regulation of the black tiger enzyme. It is compatible with the speculation that D-alanine is involved in the osmotic stress response in several marine and euryhaline invertebrates[9-14]. We also studied the reaction mechanism of alanine racemase from thermophilic bacteria, Bacillus stearothermophilus.

Report

(3 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • Research Products

    (16 results)

All Other

All Publications (16 results)

  • [Publications] Tohru Yoshimura: "Occurrence of PLP-Dependent Serine Racemase in Silkworm, Bombyxmori"Biochem. Biophs. Res. Commun.. 246. 31-34 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tohru Yoshimura: "Transamination as a side-reaction catalyzed by alanine racemase of Bacillus stearothermophilus"J. Biochem. (Tokyo). 124. 1163-1169 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tohru Yoshimura: "Role of Lysine 39 of Alanine Racemase from Bacillus stearothermophilus that Binds Pyridoxal5'-Phosphate : Chemical Rescue Studies of Lys39→Ala mutant"J. Biol. Chem.. 274. 4189-4194 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tohru Yoshimura: "Role of tyrosine 265 of alanine recemase form Bacillus stearothermophilus"J. Biochem. (Tokyo). 125. 987-990 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tohru Yoshimura: "Tyrosine 265 of alanine racemase serves as a base abstracting x-hydorogen from L-alanine : the counterpart residue to lysine 39 specific to *"J. Biochem. (Tokyo). 126. 781-786 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tohru Yoshimura: "Occurrence of PLP-Dependent Serine Racemase in Silkworm, Bombyx mori."Biochem. Biophys. Res. Commun.. 246. 31-34 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tohru Yoshimura: "Transamination as a side-reaction catalyzed by alanine racemase of Bacillus stearothermophilus"J. Biochem (Tokyo). 124. 1163-1169 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tohru Yoshimura: "Role of Lysine39 of Alanine Racemase from Bacillus stearohtermophilus that Binds Pyridoxal 5'-Phosphate : Chemical Rescue Studies of Lys39→Ala Mutant."J. Biol. Chem. 274. 4189-4194 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tohru Yoshimura: "Role of tyrosine 265 of alanine racemase from Bacillus stearothermophilus."J. Biochem. (Tokyo). 125. 987-990 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tohru Yoshimura: "Tyrosine 265 of alanine racemase serves as a base abstracting α-hydrogen from L-alanine : he counterpart residue to lysine 39 specific to D-alanine"J. Biochem. (Tokyo). 126. 781-786 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Takuma Uo: "Occuurrence of PLP-Dependent Serine Racemase in Silkworm,Bombyx mori"Biochem,Biophys.Res,Commun.. 246・1. 31-34 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] Yoichi Kurokawa: "Transamination as a side-reaction catalyzed by alanine racemase of Bacillus stearothermophilus"J.Biochem(Tokyo). 124・6. 1163-1169 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] Akira Watanabe: "Role o Lysine39 of Alanine Racemase from Bacillus stearohtermophilus that Binds Pyridoxal 5'-Phosphate : Chemical Resucue Studies of Lys39→AlaMutan"J.Biol.Chem.. 274・7. 4189-4194 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Akira Watanabe: "Role of tyrosine 265 of alanine racemase from Bacillus stearothermophilus"J.Biochem(Tokyo). 125・6. 987-990 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Akira Watanabe: "Tyrosine 265 of alanine recemase serves as a base abstracting α-hydrogen from L-alanine : the counterpart residue to lysine 39 specific to D-alanine"J.Biochem(Tokyo). 126・4. 781-786 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Takuma Uo: "Occurrence of PLP-Dependent Serine Racemase in Silkworm,Bombyx mori" Biochem.Biophys.Res.Commun.246・1. 31-34 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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