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Structure and function of two novel respiratory chain complex from Gram-positive thermophilic bacteria

Research Project

Project/Area Number 10680617
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionKyushu Institute of Technology

Principal Investigator

SAKAMOTO Junshi  KIT, Dept. of Biochemical Engineering and Science, Associate Professor, 情報工学部, 助教授 (80175364)

Co-Investigator(Kenkyū-buntansha) NOGUCHI Shunsuke  KIT, Dept. of Biochemical Engineering and Science, Assistant Professor, 情報工学部, 助手 (30222194)
SONE Nobuhito  KIT, Dept. of Biochemical Engineering and Science, Professor, 情報工学部, 教授 (20049034)
Project Period (FY) 1998 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 1999: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 1998: ¥1,800,000 (Direct Cost: ¥1,800,000)
Keywordsthermophile / Gram-positive bacteria / respiratory chain / cytochrome / oxidase / bioenergetics
Research Abstract

The genes encoding cytochrome bd-type quinol oxidase were completely cloned from the Gram-positive thermophilic bacteria Bacillus stearothermophilus. Comparison and alignment with sequences reported for other cytochromes bd show that these oxidases can be divided into two subfamilies and that the B. stearothermophilus enzyme is the first member of the second group which has been isolated and characterized. Hydropathic analysis indicates that the previous structural model for cytochrome bd mainly based on the analysis of the E. coli enzyme needs to be revised.
The genes for cytochrome boィイD23ィエD2-type cytochrome c oxidase were ligated to the shuttle vector pSTE12 and introduced in the wild B. stearothermophilus cells to be over-expressed. The produced oxidase was purified, reconstituted into liposomes, and showed HィイD1+ィエD1 pumping activity, although the HィイD1+ィエD1/O ratio was lower than that of cytochrome caaィイD23ィエD2-type oxidase. A strain of mutant cells in which cytochrome boィイD23ィエD2-type oxidase mainly operates was isolated. The HィイD1+ィエD1 pumping activity and steady-state growth extent of the cells were higher than those of the mutant K17, in which cytochromes bd operates as the main terminal oxidase, and lower than those of the wild cells, in which cytochrome caaィイD23ィエD2 mainly operates. This finding suggests that the efficiency of cellular energy metabolism depends on which respiratory enzyme actually works.
Furthermore, the ctaA gene, located upstream of the cytochrome caaィイD23ィエD2 operon, was cloned from B. stearothermophilus and over-expressed in E. coli host cells. The CtaA product in the membrane preparation converts heme O into heme A in vitro. This finding is a direct evidence to show that CtaA is the heme A synthase.

Report

(3 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • Research Products

    (21 results)

All Other

All Publications (21 results)

  • [Publications] Nikaido, K. et.al.: "The cbaAB genes for bo_3-type cytochrome......."Biochim. Biophys. Acta. 1397. 262-267 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sakamoto, J. et.al.: "Gene structure and quinol oxidase activity......."Biochim. Biophys. Acta. 1411. 147-158 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sakamoto, J. et.al.: "Cloning of bacillus strearothermophilns ctaA......."Biosci. Biotechnol. Biochem.. 63. 96-103 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sone, N. et.al.: "Direct correlation ship between proton......"J. Biosci. Bioengin.. 87. 401-410 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Nikaido, K. et.al.: "Over-expression of cbaAB genes of ......"Biochim. Biophys. Acta. 1456. 35-44 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sone, N. et.al.: "Energy-yielding properties of soxB......"J. Biochem.. (in press). (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 坂本順司: "柔らかい頭のための生物化学"コロナ社. 321 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Nikaido, K., Noguchi, S., Sakamoto, J., and Sone, N.: "The cbaAB genes for boィイD23ィエD2-type cytochrome c oxidase in Bacillus stearothermophilus"Biochim. Biophys. Acta. 1397. 262-267 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sakamoto,J., Koga,E., Minta,T.,Sato, C.,Noguchi., Sone, N.: "Gene structure and quinol oxidase activity of a cytochrome bd-type oxidase from Bacillus stearothermophilus"Biochim. Biophys. Acta. 1411. 147-158 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sakamoto, J., Hayakawa, A., Uehara. T., Noguchi, S., and Sone, N.: "Cloning of Bacillus stearothermophilus ctaA and heme A synthesis with the CtaA protein produced in Echerichia coli."Biosci. Biotechnol. Biochem. 63. 96-103 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sone, N., Tsukita, S., and Sakamoto, J.: "Direct correlationship between proton translocation and growth yield: An analysis of the respiratory chain of Bacillus stearothermophilus"J. Biosci. Boengin. 87. 401-410 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Nikaido, K., Sakamoto,J., Noguchi, S., and Sone, N.: "Over-expression of cbaAB genes of Bacillus stearothermophilus produces a two-subunit SoxB-type cytochrome c oxidase with proton pumping activity"Biochim. Biophys Acta. 1456. 35-44 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sone, N., Koyanagi, S., and Sakamoto, J.: "Energy-yielding properties of SoxB-type cytochrome boィイD23ィエD2 terminal oxidase: analyses using Bacillus stearothermophilus K1041 and its mutant strains"J. Biochem.. in press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kusumoto, K., Sakiyama, M., Sakamoto, J., Noguchi, S., and Sone, N.: "Menaquinol oxidase activity and primary structure of cytochrome bd from the amino-acid fermenting bacterium Corynebacterium glutamicum"Arch. Microbiol.. in press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sakamoto.,J.et al.: "Gene Structure and quinol oxidase activity of..."Biochim.Biophys.Acta. 1411. 147-158 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Nikaido,K.,et al.: "Over-expression of cbaAB genes of Bacillus..."Biochim.Biophys.Acta. 1456. 35-44 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Sone,N.,et al.: "Energy-Yielding properties of SoxB-type cytochrome..."J.Biochem.. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kusumoto,K.,et al.: "Menaquinol oxidase activity and primary structure..."Arch.Microbiol.. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Junshi Sakamoto,et al.: "Gene structure and quinol oxidase activity of a cytochrome…" Biochim,Biophys.Acta. (in press). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Nobuhito Sone,te al.: "Derect Correlationship between proton translocation…" J.Ferm.Bioeng.(in press). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Junshi Sakamoto,et al.: "Cloning of Bacillus stearothermophilus cta A and heme A…" Biosci.Biotechnol.Biochem.63(1). 96-103 (1999)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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