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New Structural Motifs Found in Inverterate Proteins.

Research Project

Project/Area Number 10680625
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionTOYAMA MEDICAL AND PHARMACEUTICAL UNIVERSITY

Principal Investigator

KAWANO Keiichi  Toyama Medical and Pharmaceutical University, Faculty of Pharmaceutical Sciences, Professor, 薬学部, 教授 (10136492)

Co-Investigator(Kenkyū-buntansha) KAWABATA Shunichiro  Kyushyu University, Graduate School of Science, Associate Professor, 大学院・理学研究科, 助教授 (90183037)
Project Period (FY) 1998 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 1999: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 1998: ¥2,000,000 (Direct Cost: ¥2,000,000)
Keywordshorseshoe crab / nematode / antimicrobial protein / NMR / solution structure / tachystatin / tachycitin / ASABF / カルシウムチャンネルブロッカー
Research Abstract

Many new structures and functions are expected to be found in invertebrate proteins because of the diversity of invertebrate animals. In particular, invertebrate defense systems, so-called innate immunity, include hemolymph coagulation and phenoloxidase-mediated melanization are induced by foreign substances, that result in the engulfment of invading microorganisms. These immobilized invaders are finally killed by antimicrobial substances released mainly from various hemocytes. In spite of the absence of immunoglobulin itself, the invertebrate hemolymph is capable of responding with a high degree of specificity against invaders. The authors focused on the new defense molecules in the invertebrate animals, horseshoe crab and nematode.
Tachycitin is an antimicrobial protein isolated from hemocytes of horseshoe crab, Tachypleus tridentatus. The solved structure is stabilized by five disulfide bridges, involving a three stranded antiparallel β-sheet. It is found that the N- and C-terminal are flexible and without regular secondary structures. Structural comparison between tachycitin and the known chitin-binding proteins reveals that the local structure (residues 40-60) of tachycitin is similar to that of plant chitin-binding proteins.
Tchystatin is also an antimicrobial protein isolated from hemocytes of horseshoe crab, Tachypleus tridentatus. From NOESY spectra analyses and structure calculations, the main element of secondary structure of tachystatin A is its triple- stranded β-sheet of classificaton +2x, -1 as its dominant structural motif. The three-dimensional structure of tachystatin A is similar with that of calcium channel blocker ω-agatoxin IVA found in venom of funnel web spider.
ASABF (A. suum antibacterial factor) is an antimicrobial protein found in the body fluid of the nematode Ascaris suum. The secondary structure of ASABF is composed of one α-helix and one β-sheet like as the motif of insect defensin.

Report

(3 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • Research Products

    (43 results)

All Other

All Publications (43 results)

  • [Publications] M. Yoshino, etc.: "Interaction of aluminum ion with ATP. Mechanism of the aluminum inhibition of glycerol kinase and its reversal by spermine"BioMetals. 11. 63-67 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Y. Abe, etc.: "Detection of local interaction of hen lysozyme under highly denaturing conditions using chemically 13C-enriched methionine resonance"J. Biochem.. 123. 313-317 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Aizawa, etc.: "Adsorption of human lysozyme onto hydroxyapatite. Identification of its adsorbing site using site directed mutagenesis"FEBS Letters. 422. 175-178 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 河野敬一、他: "カブトガニ血液中に発見された生体防御蛋白質―蛋白質の立体構造は進化の過程でどのように保存されてきたか"化学と生物. 36(12). 764-766 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Koshiba, etc.: "Calorimetric study of mutant human lysozymes with partially introduced Ca2+ binding sites and its efficient refolding system from inclusion bodies"Protein Engineering. 11. 683-690 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] M. Kikuchi, etc.: "Calcium-binding and structural stability of echidna and canine milk lysozymes"Protein Science. 7. 2150-2155 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Suetake, etc.: "Three-Dimensional Structure of Tachycitin in Solution Determined by 1H NMR"Reports on Progress in polymer Physics in Japan (RPPPJ). 41. 67-70 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Aizawa, etc.: "Solution structure of insect growth factor, growth-blocking peptide"J. Biol. Chem.. 274. 1887-1890 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Koshiba, etc.: "Expression of a synthetic gene encoding canine milk lysozyme in Escherichia coli and characterization of the expressed protein"Protein Engineering. 12. 429-435 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 河野敬一、相沢智康: "重水素交換を用いた蛋白質の固体吸着部位の同定"生物物理. 39(2). 109-112 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 阿久津秀雄、河野敬一: "多核NMR入門―自然を複眼で見る―"廣川書店. 147 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 河野敬一、他: "エッセンシャル化学辞典(玉虫怜太、井上祥平、梅澤喜夫、小谷正博、鈴木紘一、務台 潔、編)"東京化学同人. 684 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] M. Yoshino, et al.: "Interaction of aluminum ion with ATP. Mechanism of the aluminum inhibition of glycerol kinase and its reversal by spermine."Bio Metals. 11. 63-67 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Y. Abe, et al.: "Detection of local interaction of hen lysozyme under highly denaturing conditions using chemically 13C-enriched methionine resonance."J. Biochem.. 123. 313-317 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Aizawa, et al.: "Adsorption of human lysozyme onto hydroxyapatite. Identification of its adsorbing site using site directed mutagenesis."FEBS Letters. 422. 175-178 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K. Kawano et al.: "Defense molecules found in horseshoe crab hemolymph-their structures and functions."Kagaku to Seibutsu. 36(12). 764-766 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Koshiba, et al.: "Calorimetric study of mutant human lysozymes with partially introduced Ca2+ binding sites and its efficient refolding system from inclusion bodies."Protein Engineering. 11. 683-690 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] M. Kikuchi, et al.: "Calcium-binding and structural stability of echidna and canine milk lysozymes."Protein Science. 7. 2150-2155 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Suetake, et al.: "Three-Dimensional Structure of Tachycitin in Solution Determined by 1H NMR."Reports on Progress in polymer Physics in Japan (RPPPJ). 41. 67-70 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Aizawa. et al.: "Solution structure of insect growth factor, growth-blocking peptide."J. Biol. Chem.. 274. 1887-1890 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Koshiba, et al.: "Expression of a synthetic gene encoding canine milk lysozyme in Escherichia coli and characterization of the expressed protein."Protein Engineering. 12. 429-435 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K. Kawano and T. Aizawa: "Identification of protein adsorbing site onto solids surface using hydrogen-deuterium exchange labeling"Biophysics (Japan). 39(2). 109-112 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] H. Akutsu and K. Kawano: "Introduction to multinuclear NMR -observe nature from many angles-"Hirokawa pub. co.. (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K. Kawano et al.: "Essential Chemical Ditionary, R. Tamamushi et al. eds."Tokyo Kagakudojin pub. co.. (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] M. Yoshino, etc.: "Interaction of aluminum ion with ATP. Mechanism of the aluminum inhibition of glycerol kinase and its reversal by spermine."BioMetals. 11. 63-67 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] Y. Abe, etc.: "Detection of local interaction of hen lysozyme under highly denaturing conditions using chemically 13C-enriched methionine resonance."J. Biochem.. 123. 313-317 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] T. Aizawa, etc.: "Adsorption of human lysozyme onto hydroxyapatite. Identification of its adsorbing site using site directed mutagenesis."FEBS Letters. 422. 175-178 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] 河野敬一、他: "カブトガニ血液中に発見された生体防御蛋白質-蛋白質の立体構造は進化の過程でどのように保存されたきたか"化学と生物. 36(12). 764-766 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] T. Koshiba, etc.: "Calorimetric study of mutant human lysozymes with partially introduced Ca2+ binding sites and its efficient refolding system from inclusion bodies."Protein Engineering. 11. 683-690 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] M. Kikuchi, etc.: "Calcium-binding and structural stability of echidna and canine milk lysozymes."Protein Science. 7. 2150-2155 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] T. Suetake, etc.: "Three-Dimensional Structure of Tachycitin in Solution Determined by 1H NMR."Reports on Progress in polymer Physics in Japan (RPPPJ). 41. 67-70 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] T. Aizawa, etc.: "Solution structure of insect growth factor, growth-blocking peptide."J. Biol. Chem.. 274. 1887-1890 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] T. Koshiba, etc.: "Expression of a synthetic gene encoding canine milk lysozyme in Escherichia coli and characterization of the expressed protein."Protein Engineering. 12. 429-435 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 河野敬一、相沢智康: "重水素交換を用いた蛋白質の固体吸着部位の同定"生物物理. 39(2). 109-112 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 阿久津秀雄、河野敬一: "多核NMR入門-自然を複眼で見る-"廣川書店. 147 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 河野敬一、他: "エッセンシャル化学辞典(玉虫伶太、井上祥平、梅澤喜夫、小谷正博、鈴木紘一、務 台 潔、編)"東京化学同人. 684 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] M.Yoshino 他: "Interaction of aluminum ion with ATP.Mechaxism of the aluminum inhibition of glycerol kinase and its reversal by spermine," BioMetals. 11. 63-67 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Abe 他: "Detection of local interaction of hen lysozyme under highly denaturing conditions using chemically βC-enriched methionine resonance." J.Biochemistry. 123. 313-317 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Aizawa 他: "Adsorption of Guman lysozyme outo hydroxyapatite.Identification of its adsorbing site using site-directed mutagenesis" FEBS Letters. 422. 175-178 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Koshiba,他: "Calorimetric study of mutant human lysozymes with partially introduced co^<2+> bindixg sites and its etticient refolding system from inclusiox bodies." Protein Engineering. 11(8). 683-690 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] M.Kikuchi 他: "Calcium-binding and structural stability of echiclna and canine milk lysozymes." Protein Science. 7. 2150-2155 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Aizawa 他: "Solution structure of an insect growth factor,groutr blocking peptide." J.Biol.Chem.274(4). 1887-1890 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] 阿久津秀雄,河野敬一: "多核NMR-自然を複眼で見る-" 廣川書店, 143 (1999)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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