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The molecular architecture of a giant hemoglobin : Diversity and molecular evolution of hemoglobin.

Research Project

Project/Area Number 10836015
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 自然史科学
Research InstitutionThe University of Tokushima

Principal Investigator

GOTOH Toshio  Fac. of Integrated Arts and Sciences, Dep. of Life Science, The University of Tokushima, Professor, 総合科学部, 教授 (90035692)

Project Period (FY) 1998 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 2001: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2000: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 1999: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1998: ¥900,000 (Direct Cost: ¥900,000)
Keywordshemoglobin / annelid / molecular evolution / supramolecule / carbohydrate / ESI-MS / protein
Research Abstract

An annelid extracellular hemoglobin (Hb) has a molecular mass of 3.5 MDa, which is ca. 50 times larger than human Hb and doubles in size of a ribosome. It is known that there are four species of globin chains (a, A, b, B) and two types of non-heme proteins (linkers ; L1, L2) in the giant Hb. The globin subunits form 12 substructures which are linked by the linker chains. In the present study, we focused on the subunit assembly, role of linker, and binding manner between globin substructures and linkers. Main results obtained are as follows :
1. Molecular masses of substructures are determined directly for some annelid Hbs by ESI-MS. The mass values obtained have revealed that the substructures are composed of globin dodecamer (3 (a, A, b, B)).
2. It was found that linker chains are preferentially digested by some proteolytic enzymes, remaining globin substructures to be intact. Thus, the substructures were isolated and their molecular masses were estimated by light scattering.
3. Amino acid sequences of chains a, b, and B of Perinereis Hb were determined. The molecular masses obtained from the sequences are in good agreement with the values of ESI-MS. This leads us to conclude that these globin chains do not contain any carbohydrate. Phylogenetic tree showed that there are two globin strains in annelid Hbs which were diversed about the same era when vertebrate myoglobin and hemoglobin were diversed.
4. It was demonstrated that linkers has a structuring activity to form a giant Hb in the final stage of subunit assembly.

Report

(5 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (20 results)

All Other

All Publications (20 results)

  • [Publications] Green, B.N.: "Electrospray Ionization Mass Spectrometric Observation of Large, Noncovalent Globin Subassemblies in the -3600 kDa Hexagonal Bilayer Hemoglobins"J. Mol. Biol. 309. 553-560 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 後藤寿夫: "Oxygen-binding and related proteins : Structure, function and evolution"比較生理生化学. 16. 223-236 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Matsubara, K.: "Lectin-like binding activity of linker L2 in giant hemoglobin from Perinereis aibuhitensis"Comp.Physiol. Biochem.. 124A (Suppl.). S94 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Zal, F.: "The novel function of giant hemoglobins from tubeworms and annelids"Comp.Physiol. Biochem.. 124A (Suppl.). S16 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yamaki, M.: "Carbohydrate-gluing is a strategy for supramolecular clamping of submutiples in annelid extracellular multi-subunit hemoglobin"Arch. Biochem. Biophys.. 355. 75-84 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Gotoh, T.: "Hexagonal bilayer structuring activity of linker chains of an annelid giant hemoglobin from the polychaete Perinereis aibuhitensis"Arch. Biochem. Biophys.. 360. 75-84 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Brian N. Green, Toshio Gotoh, Tomohiko Suzuki, Franck Zal, Francois H. Lallier, Andre Toulmond and Serge N. Vinogradov: "Electrospray Ionization Mass Spectrometric Observation of Large, Noncovalent Globin Subassemblies in the 〜3600 kDa Hexagonal Bilayer Hemoglobins"J. Mol. Biol.. 309. 553-560 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Toshio Gotoh: "Oxygen-binding and related proteins : Structure, function and evolution"Comp. Biochem. Physiol. (in Japanese). 16. 233-236 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Matsubara, K., Yamaki, M., Ebina, S., and Gotoh, I.: "Lectin-like binding activity of linker L2 in giant hemoglobin from Perinereis aibuhitensis"Comp. Phyiosl. Biochem.. 124A (Suppl.). S94 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Zal, F., Gotoh, T., and Toulmond, A.: "The novel function of giant hemoglobins from tubeworms and annelids"Comp.Phyiosl. Biochem.. 124A (Suppl.). S16 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yamaki., M., Kubota, K., Matsubara, K, Ebina, S. and Gotoh, T.: "Carbohydrate-gluing is a strategy for supramolecular clamping of submutiples in annelid extracellular multi-subunit hemoglobin"Arch. Biochem. Biophys.. 355. 119-123 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Toshio Gotoh, Toshiya Sano, Akihiro Shibuya, Mariko Yamaki, Kiyohiro Imai, and Satoshi Ebina.: "Hexagonal bilayer structuring activity of linker chains of an annelid giant hemoglobin from the polychaete Perinereis aibuhitensis"Arch. Biochem. Biophys.. 360. 75-84 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Green, B.N.: "Electrospray Ionization Mass Spectrometric Observation of Large, Noncovalent Globin Subassemblies in the 〜3600kDa Hexagonal Bilayer Hemoglobins"J. Mol. Biol.. 309. 553-560 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Zal.F.: "Free cystein residues : active sites for "new" functions in worm hemogoboins, suofide carrying and/or trapping."Invertebrate O_2 Binding Proteins.. (In press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Matsubara,Keiko: "Lectin-like binding activity of linker L2 in giant hemoglobin from Perinereis aibuhitensis."Comp.Physiol.Biochem.. 124A(Suppl.). S94 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Zal,Franck: "The novel function of giant hemoglobins from tubeworms and annelids."Comp.Physiol.Biochem.. 124A(Suppl.). S16 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Yamaki,Mariko: "A submultiple is a basic functional unit of annelid extracellular multisubunit hemoglobin identified by dynamic light scattering,transmission electronmicroscopy"Comp.Physiol.Biochem.. 124A(Suppl.). S95 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 後藤寿夫: "Oxygen-binding and related proteins:Structure,function and evolution."比較生理生化学. 16. 233-236 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Toshio Gotoh: "Hexagonal bilayer structing of activiry of linker strudcting activiry of chains of an annelied giant hemogiobin form the polycihaete Perinereis aibuhitensis." Arch Biochem.Biopys. 360・1. 75-85 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] MaRiko Yamaki Carbohydrate-gluing is astrategy for supramolecular clamping of submutiples in annelid extraccellular multi-subunit hemogrobin.: "Arch Biochem.Biopys" 355・1. 1988. (119-123)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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