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分子間相互作用の可視化と細胞内分子定量イメージング

Research Project

Project/Area Number 11242206
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionNational Institute of Genetics

Principal Investigator

徳永 万喜洋  国立遺伝学研究所, 構造遺伝学研究センター, 教授 (00192659)

Co-Investigator(Kenkyū-buntansha) 椎名 伸之  国立遺伝学研究所, 構造遺伝学研究センター, 助手 (30332175)
安永 卓生  九州工業大学, 情報工学部, 助教授 (60251394)
後藤 由季子 (後藤 由起子)  東京大学, 分子細胞生物学研究所, 助教授 (70252525)
仁木 宏典  放射線アイソトープセンター, 助教授 (70208122)
木村 宏  京都大学, 先端領域融合医学研究機構, 教授 (30241392)
Project Period (FY) 1999 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥180,000,000 (Direct Cost: ¥180,000,000)
Fiscal Year 2003: ¥32,300,000 (Direct Cost: ¥32,300,000)
Fiscal Year 2002: ¥29,800,000 (Direct Cost: ¥29,800,000)
Fiscal Year 2001: ¥37,400,000 (Direct Cost: ¥37,400,000)
Fiscal Year 2000: ¥39,100,000 (Direct Cost: ¥39,100,000)
Fiscal Year 1999: ¥41,400,000 (Direct Cost: ¥41,400,000)
Keywords1分子イメージング / 1分子ナノテクノロジー / 薄層斜光照明法 / 蛍光顕微鏡 / 細胞質核間分子輸送 / 定量的画像解析 / 分子機構定量解析 / 対物レンズ型全反射照明法 / 低角斜光照明法 / 細胞質核間輸送 / 対物レンズ型全反射照明 / 共焦点顕微鏡 / 核輸送
Research Abstract

細胞内部の蛍光1分子イメージングを、薄層斜光照明法を用いて行い、細胞内部での分子数と分子間相互作用を定量的に解析した。細胞質・核間輸送を担うImportin beta分子と核膜孔複合体との相互作用に関し、1分子と核膜孔1個との蛍光強度比から、結合分子数を定量した。濃度を変え、核膜孔との結合分子数・結合定数を求めた。その結果、2種類の結合部位があることが見つかり、弱い結合部位は、最大結合分子数110(+60,-40)個、解離定数70(+50,-30)nM、強い結合部位は、最大結合分子数7(+6,-4)個、解離定数0.3(+0.2,-0.1)nMであった。核膜孔複合体の構造には8回対称性があるので、強い結合部位の個数は、8個(もしくは16個)と推定される。1分子像の経時変化から、Importin betaと核膜孔複合体の結合時間(滞在時間)を求め、弱い結合が約1秒、強い結合が6秒以上、輸送中が約3秒であった。
核内移行の輸送活性を蛍光像から直接計測したところ、細胞レベルの核内輸送速度と、以上の1分子計測で求めた値とがよく一致し、1分子解析による新しい手法が有用であることを示した。
強い結合部位は核膜孔通過と密接な関係にあり、弱い結合部位はたくさんの分子を結合させて輸送される分子を集める役割を果たしていると考えられる。相互作用の強弱および変化により選択的な通過を実現しており、たくさんの分子を集めることにより通過速度を速めているという、新しいモデルを提案した。

Report

(5 results)
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • Research Products

    (52 results)

All Other

All Publications (52 results)

  • [Publications] Hirakawa Y: "Observation and analysis of single DNA nano-kinetics by pin-fiber video scope"Analyst. 128. 676-680 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 徳永万喜洋: "生きた細胞内でうごめく「分子の振舞い」をダイナミックな映像で可視化"ダイヤモンド・ループ ダイヤモンド社. 4. 38 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yamaichi, Y.: "migS, a cis-acting site that affects bipolar positioning of oriC on the Escherichia coli chromosome"EMBO J.. 23(1). 221-233 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Tsuruta, F: "JNK promotes Bax translocation to mitochondria through phosphorylation of 14-3-3 proteins"EMBO J. (in press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hirabayashi, Y: "The Wnt-beta-catenin pathway directs neuronal differentiation of cortical neural precursor cells"Development. (in press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Higuchi, M: "The phosphatidylinositol-3 kinase (PI3K) -Akt pathway suppresses neurite branch formation in NGF-treated PC12 Cells"Genes to Cells. 8. 657-669 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Miyagi, S: "The sox-2 regulatory regions display their activities in two distinct multipotent stem cells"Mol.Cell.Biol. (in press).

    • Related Report
      2003 Annual Research Report
  • [Publications] Suzawa, M: "Cytokines suppress adipogenesis and PPAR-gamma function through the TAK1/TAB1/NIK cascade"Nat.Cell Biol.. 5. 224-230 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Fujishiro, M: "Three Mitogen-Activated Protein kinases inhibit Insulin signaling by different mechanisms in 3T3-L1 adipocytes"Mol.Endocrinology. 17. 487-497 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sakoda, H: "Differing roles of Akt and SGK in glucose metabolism, DNA synthesis and oncogenic activity"J.Biol.Chem. 278. 25802-25807 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Katome, T: "Use of RNA-interference-mediated gene silencing and adenoviral overexpression to elucidate the roles of AKT/PKB-isoforms in insulin actions"J.Biol.Chem. 278. 28312-28323 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kimura H: "Measuring histone and polymerase dynamics in living cells."Methods Enzymol.. 375. 381-393 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Muraki, M: "Manipulation of alternative splicing by a newly developed inhibitor of Clks"J.Biol.Chem. (in press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Inoue, K: "TNF alpha-induced ATF3 expression is bidirectionally regulated by the JNK and ERK pathways in vascular endothelial cells"Genes Cells. 9. 59-70 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Tatsumi, Y: "The ORC1 cycle in human cells : I. Cell cycle-regulated oscillation of human ORC1"J.Biol.Chem. 278. 41528-41534 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Duringer, C: "HAMLET interacts with histones and chromatin in tumor cell nuclei"J.Biol.Chem. 278. 42131-42135 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hori, T: "Dynamic behavior of Nuf2-Hec1 complex that localizes to centrosome and centromere and is essential for mitotic progression in vertebrate cells"J.Cell Sci.. 116. 3347-3362 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Suzuki, H: "Involvement of MKK6 in TCRαβ^<int>CD69^<lo> : a target population for apoptotic cell death in thymocytes"FASEB J.. 17. 1538-1540 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ishimi, Y: "Enhanced expression of Mcm proteins in cancer cells derived from uterine cervix"Eur.J.Biochem. 279. 1089-1101 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kudo, Y: "Quantifying the syncytialisation of human placental trophoblast BeWo cells grown in vitro"Biochim.Biophys.Acta. 1640. 25-31 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 木村 宏: "時間軸にわたる染色体機能の変化"医学のあゆみ. 208. 890-894 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 木村 宏: "四角いスタンプ"細胞工学. 22. 1041 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 木村 宏: "細胞核構造と機能のストカスティックな制御"生物物理. 43. 234-239 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 木村 宏: "クロマチンのダイナミクス"生体の科学. 54. 166-170 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 徳永万喜洋: "生物物理ハンドブック(石渡信一・桂勲・桐野豊・美宅成樹編)"朝倉書店(印刷中).

    • Related Report
      2003 Annual Research Report
  • [Publications] 増山典久: "実験医学 増刊"羊土社. 258-264 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 樋口麻衣子: "実験医学"羊土社. 2499-2504 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 木村 宏: "細胞核のダイナミクス(米田悦啓・竹安邦夫編)"シュプリンガーフェアラーク東京(印刷中).

    • Related Report
      2003 Annual Research Report
  • [Publications] Hirakawa, Y.: "Analysis of the Nano-Kinetic Movement of a Single DNA by a Pin-Fiber Video Scope"Analytical Sciences. 18. 1293-1294 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Fkuzawa A.: "Single Molecule Measurement of Elasticity of Serine-Glutamate-and Lysine-Rich Repeats of Invertebrate Connectin Reveals That Its Elasticity Is Caused Entropically by Random Coil Structure"J.Mus.Res.Cell Mot.. (in press).

    • Related Report
      2002 Annual Research Report
  • [Publications] 徳永 万喜洋: "「見えなかったものを観る-無理と言われたテーマに挑戦-」"ロマン探究""Science & Technorogy Journal. 11・10. 52-53 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ogawara, Y: "Akt enhances Mdm2-mediated ubiquitination and degradation of p53"J.Biol.Chem.. 277. 21843-21850 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Tsuruta, F.: "The PI3K-Akt pathway suppresses Bax translocation to mitochondria"J.Biol.Chem.. 277. 14040-14047 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Shinohara, M: "SWAP-70 is a guanine nucleotide exchange factor that mediates signaling of membrane ruffling"Nature. 416. 759-763 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yoshida, T.: "Archaeal Group II Chaperonin Mediates Protein Folding in the cis-Cavity Without a Detachable GroES-like Co-chaperonin"J.Mol.Biol. 315(1). 73-85 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 徳永 万喜洋: "実験医学別冊"バイオイメージングでここまで理解(わか)る""表面のみを高画質に観察できる全反射蛍光顕微鏡法. 104-113 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 徳永 万喜洋: "生物物理ハンドブック"アクチン・ミオシン分子モーター系(印刷中).

    • Related Report
      2002 Annual Research Report
  • [Publications] 安永 卓生: "機器分析"透過型電子顕微鏡法. 247-260 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 安永 卓生: "これからの大学等研究施設 生命科学編"電子顕微鏡とその施設. 8-3-8-6 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 安永 卓生: "「第6回シミュレーション・サイエンス・シンポジウム」及び核融合科学研究所共同研究「大型シミュレーション研究」合同研究会集録集"分子動力学を用いた、電子顕微鏡三次元像からの原子モデル構築へ向けて(印刷中).

    • Related Report
      2002 Annual Research Report
  • [Publications] Yanagida T.: "Single-motor mechanics and models of the myosin motor."Philos.Trans.R.Soc.Lond.B. 355. 441-447 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Graves,J.D.: "Both phosphorylation and caspase-mediated cleavage contribute to regulation of the Ste-20-like Protein Kinase Mst1 during CD95/Fas-induced apoptosis."J.Biol.Chem.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Fujishiro,M.: "MKK6/3 and p38 MAPK Pathway Activation is not Necessary for Insulin-Induced Glucose Uptake, but Regulates Glucose Transporter Expression."J.Biol.Chem.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Ura,S.,Masuyama,N.: "MST1-JNK promotes apoptosis via caspase-dependent and -independent pathways."Genes to Cells.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 喜多村和郎: "ミオシン頭部1分子はATP分解1回で複数ステップ動く:1分子補足・操作によるルースカップリングの直接証拠"生物物理. 40(2). 89-93 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 徳永万喜洋: ""新生物物理の最前線"日本生物物理学会 編"講談社ブルーバックス. (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] K.Kitamura: "A single myosin head moves along an actin filament with regular steps of 5.3 nenometers"Nature. 379. 129-134 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 廣島通夫: "分子間相互作用のイメージング -分子間力顕微鏡と1分子技術-"電子顕微鏡. 34(2). 151-153 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 徳永万喜洋: "ミオシン1分子は1個のATP分解の間に複数ステップで働く"蛋白質・核酸・酵素. 44(11). 1584-1589 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 徳永万喜洋: "1分子技術で観るミオシンの分子メカニズム"細胞工学. 18(11). 1641-1647 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 喜多村和郎: "ミオシン頭部1分子はATP分解1回で複数ステップで働く"生理物理. (印刷中). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] 船津高志: "生命科学を拓く新しい光技術"共立出版. 186 (1999)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2018-03-28  

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