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Structure and function of plastid nucleoid

Research Project

Project/Area Number 11440232
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 植物生理
Research InstitutionSAITAMA UNIVERSITY

Principal Investigator

SATO Naoki  SAITAMA UNIVERSITY, MOLECULAR BIOLOGY, PROFESSOR, 理学部, 教授 (40154075)

Co-Investigator(Kenkyū-buntansha) OHTA Niji  SAITAMA UNIVERSITY, MOLECULAR BIOLOGY, ASSISTANT PROFESSOR, 理学部, 助手 (60257186)
Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥15,800,000 (Direct Cost: ¥15,800,000)
Fiscal Year 2000: ¥2,900,000 (Direct Cost: ¥2,900,000)
Fiscal Year 1999: ¥12,900,000 (Direct Cost: ¥12,900,000)
KeywordsPlastid nucleoid / RNA polymerase / in vitro transcription / DNA-binding protein / sulfite reductase / HUタンパク質 / ヘパリン / 真核・原核ハイブリッド
Research Abstract

Plastid nucleoid, which is a functional unit of plastid DNA, is considered as a complex or hybrid of prokaryotic DNA with eukaryotic DNA-binding proteins. Based on this standpoint, we tried to identify the components of plastid nucleoids and to analyze their function in the replication and transcription of plastid DNA. The publication of the complete nucleotide sequence of the genome of Arabidopsis thaliana made us conclude that many of the prokaryotic nucleoid proteins are not present in higher plants. Examples are the HU protein and Dps protein that are ubiquitously present in prokaryotes but these are not present in the chloroplast of A. thaliana.Many of the nucleoid proteins must have been acquired during the evolution of land plants by duplication or modification of the nuclear genes encoding eukaryotic DNA-binding proteins. These results prompted us to put forward a hypothesis on the discontinuous evolution of plastid genomic machinery.

Report

(3 results)
  • 2001 Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • Research Products

    (18 results)

All Other

All Publications (18 results)

  • [Publications] N.Sato, M.Nakayama, T.Hase: "The 70-kDa major DNA-compacting protein of the chloroplast nucleoid is stil the reductase"FEBS Letters. 487. 347-350 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N.Sato, N.Ohta: "DNA-binding specificity and dimerization of the DNA-binding domain of the PEND protein in the chloroplast envelope membrane"Nucleic Acids. Res.. 29. 2244-2250 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N.Sato., N.Rolland., M.A.Block, J.Joyard: "Do plastid envelope membranes play a role in the expression of the plastid genome?"Biochimie. 81. 619-629 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 佐藤 直樹: "原核・真核ハイブリッドとしての葉緑体核様体の分子構築とそのダイナミズム"蛋白質・核酸・酵素. 45. 116-122 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N.Sato: "Was the evolution of plastid genetic machinery discontinuous?"Trends in Plant Science.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N. Sato, M. Nakayama,T. Hase: "The 70-kDa major DNA-compacting protein of the chloroplast nucleoid is sulfite reductase"FEBS Letters. 487. 347-350 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N. Sato, N. Ohta: "DNA-binding specificity and dimerization of the DNA-binding domain of the PEND protein in the chloroplast envelope membrane"Nucleic Acids. Res.. 29. 2244-2250 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N. Sato, N. Rolland, M. A. Block, J. Joyard: "Do plastid envelope membranes play a role in the expression of the plastid genome?"Biochimie. 81. 619-629 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N.Sato: "Molecular organization and dynamics of chloroplast nucleoid, a eukaryo-prokaryotic hybrid"Tanpakushitsu Kakusan Kouso. 45. 116-122 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N.Sato: "Was the evolution of plastid genetic machinery discontinuous?"Trends in Plant Science. 6. 151-156 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Sato,N.,Nakayama,M. and Hase,T.: "The 70-kDa major DNA-compacting protein of the chloroplast nucleoid is sulfite reductase."FEBS Letters. 487. 347-350 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Hashimoto,K. and Sato,N.: "Characterization of the mitochondrial nad7 gene in Physcomitrella patens : Similarity with angiosperm nad7 genes."Plant Science. (印刷中). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 得平茂樹,佐藤直樹: "窒素固定能をもつAnabaena属のラン藻の遺伝子操作."化学と生物. 39. 121-126 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Sato,N.: "Was the evolution of plastid genetic machinery discontinuous?"Trends in Plant Science. 6. 151-155 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] K. Maruyama, N. Sato and N. Ohta: "Conservation of structure and cold-regulation of RNA-binding proteins in cyanobacteria"Nucleic Acids Res.. 27. 2029-2036 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] N. Sato: "SISEQ: Manipulation of multiple sequence and large database files for common platforms"Bioinformatics. (印刷中).

    • Related Report
      1999 Annual Research Report
  • [Publications] 佐藤直樹: "真核:原核ハイブリッドとしての葉緑体核様体の分子構築とそのダイナミズム"蛋白質核酸酵素. 45. 116-122 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] N.Ohta,N.Sato and T.Kuroiwa: "The organellar genomes of Cyanidioschyzon merolae.InEnigmatic Microorganisms and Life in Extreme Environments."Kluwer Academic Publishers,Dordrecht. (1999)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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