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Study on the higher order structure of DNA that enhances the integration of transgene into the host genome

Research Project

Project/Area Number 11460156
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied molecular and cellular biology
Research InstitutionHiroshima University

Principal Investigator

MORIKAWA Hiromichi (2000-2001)  Hiroshima Univ., Graduate School of Science, Professor, 大学院・理学研究科, 教授 (00089129)

五島 直樹 (1999)  広島大学, 理学部, 助教授 (70215482)

Co-Investigator(Kenkyū-buntansha) TAKAHASHI Misa  Hiroshima Univ., Graduate School of Science, Research associate, 大学院・理学研究科, 助手 (10294513)
木須 康智  広島大学, 理学部, 助手 (20304397)
森川 弘道  広島大学, 理学部, 教授 (00089129)
Project Period (FY) 1999 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥11,100,000 (Direct Cost: ¥11,100,000)
Fiscal Year 2001: ¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2000: ¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 1999: ¥4,100,000 (Direct Cost: ¥4,100,000)
KeywordsMatrix attachment region (MAR) / scaffold attachment region (SAR) / tobacco / gene delivery / green fluorescent protein (GFP) / integration / higher order structure of DNA / trangene / MAR (matrix attachment region) / SAR (nuclear scaffold attachment region) / パーティクルガン / 外来遺伝子 / 形質転換 / 核骨格結合部位(S / MAR) / タバコ培養細胞 / GFP (green fluorescent protein) / ゲノム DNA / 植物 / トランスジェニック植物 / PCR
Research Abstract

A 507-bp sequence (designated TJ1) that has been clone from a transgene locus of tobacco cell, and found to be a nuclear matrix / scaffold attachment region (MAR/SAR) was flanked to the 5' and 3' side of the expression cassette, in four different orientations, of the green fluorescent protein (GFP), a non-selective marker, gene. In each of these expression cassette, the GFP gene was under the control of cauliflower mosaic virus 35 S promoter and nopaline synthase polyadenlyation signal. These constructs were introduced separately into tobacco cells in order to investigate the effect of the MAR on the integration frequency of the transgene into the host genome. The presence of the MAR sequences in the cassette appeared to increase the transformant yield more than 2 times as compared with the control construct lacking the MAR sequences. Since there is no selection pressure to obtain those transformants in the present study, it is conceivable that MAR-based enhancement of the gene expression is not involved in the present result of the transformant yield. Therefore, the observed transformant yield should purely reflect the frequency of the integration of the transgene into the host genome. It is thus concluded that TJ1 MAR increases the integration frequency more than 2 times over the control. No significant effect of the orientations of the MAR sequence in the transformant yield was observed. Our findings provide direct evidence for the first time that the MAR cloned from the transgene locus stimulates the integration of transgene into the eukaryotic genome

Report

(4 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • Research Products

    (24 results)

All Other

All Publications (24 results)

  • [Publications] K.Shimizu: "Presence of an SAR-like sequence in junction regions between an introduced transgene and genomic DNA of cultured tobacco cells : its effect on transformation frequency"Plant Journal. 26・4. 375-384 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M.Takahashi: "Enrichment of nitrite reductase gene improves the ability of Arabidopsis thaliana plants to assimilate nitrogen dioxide"Plant Physiology. 126・2. 731-741 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M.Takahashi: "Phytoremediation of nitrogen dioxide and its metabolism in plants"Acta Biotechnologica. (in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M.Takahashi: "Production and characterization of transgenic plants that were transformed with MnP and LiP from white rot fungi"Acta Biotechnologica. (in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Morikawa: "Metabolism of nitrogen dioxide in plants-Assimilation, dissimilation and novel metabolites"Physiology and Molecular Biology of Plants. (in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] A.Sakamoto: "Arabidopsis glutathione-dependent formaldehyde dehydrogenase is an S-nitrosoglutathione reductase"FEBS Letters. (in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Morikawa: "Phytoremediation : Transformation and Control of Contaminants"John Wiley and Sons, Inc.(in press). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K. Shimizu: "Presence of an SAR-like sequence in junction regions between an introduced transgene and genomic DNA of cultured tobacco cells : its effect on transformation frequency"Plant Journal. 26-4. 375-384 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M. Takahashi: "Enrichment of nitrite reductase gene improves the ability of Arabidopsis thaliana plants to assimilate nitrogen dioxide"Plant Physiology. 126-2. 731-741 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M. Takahashi: "Phytoremediation of nitrogen dioxide and its metabolism in plants"Acta Biotechnologica. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M. Takahashi: "Production and characterization of transgenic plants that were transformed with MnP and LiP from white rot fungi"Acta Biotechnologica. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Morikawa: "Metabolism of nitrogen dioxide in plants-Assimilation, dissimilation and novel metabolites"Physiology and Molecular Biology of Plants. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] A. Sakamoto: "Arabidopsis glutathione-dependent formaldehyde dehydrogenase is an S-nitrosoglutathione reductase"FEBS Letters. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Morikawa: "Air Pollution Clean Up Using Pollutant-Philic Plants- Metabolism of nitrogen dioxide and genetic manipulation of related genes"Phytoremediation : Transformation and Control of Contaminants, John Wiley and Sons, Inc. (in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K.Shimizu: "Presence of an SAR-like sequence in junction regions between an introduced transgene and genomic DNA of cultured tobacco cells : its effect on transformation frequency"Plant Journal. 26・4. 375-384 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] M.Takahashi: "Enrichment of nitrite reductase gene improves the ability of Arabidopsis thaliana plants to assimilate nitrogen dioxide"Plant Physiology. 126・2. 731-741 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] M.Takahashi: "Phytoremediation of nitrogen dioxide and its metabolism in plants"Acta Biotechnologica. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] M.Takahashi: "Production and characterization of transgenic plants that were transformed with MnP and LiP from white rot fungi"Acta Biotechnologica. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Morikawa: "Metabolism of nitrogen dioxide in plants-Assimilation, dissimilation and novel metabolites"Physiology and Molecular Biology of Plants. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] A.Sakamoto: "Arabidopsis glutathione-dependent formaldehyde dehydrogenase is an S-nitrosoglutathione reductase"FEBS Letters. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Morikawa: "Phytoremediation : Transformation and Control of Contaminants"John Wiley and Sons, Inc.(in press). (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Katsuya Shimizu: "Presence of an SAR-like sequence in junction regions between an introduced transgene and genomic DNA of cultured tobacco cells : its effect on transformation frequency."Plant J.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Misa.Takahashi: "Nitrite reductase gene enrichment improves assimilation of nitrogen dioxide in Arabidopsis"Plant Physiol.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Hiromichi Morikawa: "Phytoremediation : Transformation and Control of Contaminants"John Wiley and Sons, Inc.(予定). 500 (2001)

    • Related Report
      2000 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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