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Research Project

Project/Area Number 11480198
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionTHE UNIVERSITY OF TOKYO

Principal Investigator

UEDA Takuya  GRADUATE SCHOOL OF FRONTIER SCIENCES, THE UNIVERSITY OF TOKYO, PROFESSOR, 大学院・新領域創成科学研究科, 教授 (80184927)

Co-Investigator(Kenkyū-buntansha) SUZUKI Tsutomu  GRADUATE SCHOOL OF FRONTIER SCIENCES, THE UNIVERSITY OF TOKYO, LECTURER, 大学院・新領域創成科学研究科, 講師 (20292782)
OHYA Yoshikazu  GRADUATE SCHOOL OF FRONTIER SCIENCES, THE UNIVERSITY OF TOKYO, PROFESSOR, 大学院・新領域創成科学研究科, 教授 (20183767)
Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥14,300,000 (Direct Cost: ¥14,300,000)
Fiscal Year 2000: ¥4,200,000 (Direct Cost: ¥4,200,000)
Fiscal Year 1999: ¥10,100,000 (Direct Cost: ¥10,100,000)
KeywordstRNA / aminoacylation / methylation / transcription / polysemous codon / codon recognition / 翻訳 / Candida / メチル化
Research Abstract

We demonstrated that codon CUG is assigned simultaneously both-as serine arid leucine codons in several- Candida-species, using analyzes of tRNA-and genetic techniques. In order to evaluate biological significance of the polysemous decoding in Candid strains, we are addressing quantitative manipulation of leucine acceptance of responsible tRNA. We already showed that leucine acceptance is governed by the presence of 1-methylguanosine at the position 37 adjacent to the anticodon. Moreover it is suggested that A at 73 position is also significantly involved in leucylation. In this project/we prepared various transcripts with mutation and modification enzyme for m1G from E. coli by overexpression method. Furthermore, seryl-tRNA and leucyl-tRNA synthetases were also expressed in E. coli and purified. By determination of enzymatic parameters of leucylation reaction using mutants, it appeared that methyl group at position 37 is indispensable for leucine *. Acceptance. Furthermore, mutation G to A at position 73 increased Kcat/Km values 400-fold. Base upon these observations, we will introduce these mutants genes into Candida cells and alternation of cell function will be evaluated.

Report

(3 results)
  • 2001 Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • Research Products

    (35 results)

All Other

All Publications (35 results)

  • [Publications] Yasukawa, T: "A pathogenic point mutation reduces stability of mitochondrial mutant tRNA^<lle>"Nucleic Acids Research. 28. 3779-3784 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Tomari, Y: "The role of tightly bound ATP In Escherichia coli tRNA nucleotidyltransferase"Genes to Cells. 5. 689-698 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yokogawa, T: "Characterization and tRNA Recognition of Mammalian Mitochondrial Seryl-tRNA Synthetase"J. Bio. Chem.. 275. 19913-19920 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yasukawa, T: "Defect in modification at the anticodon wobble nucleotide of mitochondrial tRNA^<Lys> with the MERRF encephalomyopathy pathogenic mutation"FEBS Letters. 467. 175-178 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yasukawa, T: "Modification Defect at Anticodon Wobble Nucleotide of Mitochondrial tRNAs^<Leu>(UUR) with Pathogenic Mutations of Mitochondrial Myopathy, Encephalopahty, Lactic Acidosis, and Stroke-like Episodes"J. Biol. Chem.. 275. 4251-4257 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yokobori, S.: "Complete DNA Sequence of the Mitochondrial Genome of the Ascidia Halocynthia roretzi(Chordata, Urochordata)"Genetics. 153. 1851-1862 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Tomita, K: "Codon reading patterns in Drosophila melanogaster mitochondria based on their tRNA sequences : a unique wobble rule In animal mitochondria"Nucleic Acids Research. 27,. 4291-4297 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Suzuki, T: "High Sensitive Analysis of Modified Nucleosides by LC/MS Using ESI/Iontrap Mass Spectrometry"J. Mass Spectrom. Soc. Jpn.. 47(3). 168-176 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Sasuga, J.: "Gene Contents and Organization of a Mitochondrial DNA Segment of the Squid Loligo bleekeri"J. Mol. Evol. 48. 692-702 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kondow, A.: "An extra tRNAGly(U^*CU)found in ascidian mitochondria responsible for decoding non-universal codons AGA/AGG as glycine"Nucleic Acids Research. 27. 2554-2559 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ogawa, T.: "A cytotoxic ribonuclease targeting specific transfer rna anticodons"Science. 283. 2097-2100 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Tomita, T: "The presence of pseudouridine in the anticodon alters the genetic code : a possible mechanism for assignment of the AAA lysine codon as asparagine in echinoderm mitochondria"Nucleic Acids Research. 27. 1683-1689 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yasukawa, T.: "A pathogenic point mutation reduces stability of mitochondrial mutant tRNA^<llcγ>"Nucleic Acids Research. 28. 3779-3784 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Tomari, Y.: "The role of tightly bound ATP In Escherichia coli tRNA nucleotidyltransferase"Genes to Cells. 5. 689-698 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yokogawa, T.: "Characterization and tRNA Recognition of Mammalian Mitochondrial Seryl-tRNA Synthetase"J. Biol. Chem.. 275. 19913-19920 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yasukawa, T.: "Defect in modification at the anticodon wobble nucleotide of mitochondrial tRNA^<Lys> with the MERRF excephalomyopathy pathogenic mutation"FEBS Letters. 467. 175-178 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yasukawa, T.: "Modification Defect at Anticodon Wobble Nucleotide of Mitochondrial tRNAs^<Leu> (UUR) with Pathogenic Mutations of Mitochondrial Myopathy, Encephalopathy, Lactic Acidosis, and Stroke-like Episodes"J. Biol. Chem.. 275. 4251-4257 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yokobori, S.: "Complete DNA Sequence of the Mitochondrial Genome of the Ascididan Halocynthia reretzi (Chordata, Urochordata)"Genetics. 153. 1851-1862 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Tomita, K.: "Codon reading patterns in Drosophila melanogaster mitochondra based on their tRNA sequences : a wobble rule In animal mitochondria"Nucleic Acids Research. 27. 4291-4297 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Suzuki, T.: "High Sensitive Analysis of Modified Nucleosides by LC/MS Using ESI/Iontrap Mass Spectrometry"J. Mass Spectrom, Soc. Jpn.. 47(3). 168-176 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Sasuga, J.: "Gene Contents and Organization of a Mitochondrial DNA Segment of the Squid Loligo bleekeri"J. Mol. Evol.. 48. 692-702 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kondow, A.: "An extra tRNAGly (U*CU) found in ascidian mitochondria responsible for decoding non-universal codons AGA/AGG as glycine"Nucleic Acids Researh. 27. 2554-2559 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ogawa, T.: "A cytotoxic ribonnuclease targeting specific transfer maanticodons"Science. 283. 2097-2100 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Tomita, T.: "The presence of pseudouridine in the anticodon alters the genetic code : a possible mechanism for assignment of the AAA lysine codon as asparagine in echinoderm mitochondria"Nucleic Acids Research. 27. 1683-1689 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yasukawa,T: ""A pathogenic point mutation reduces stability of mitochondrial mutant tRNA^<lle>""Nucleic Acids Research. 28. 3779-3784 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Tomari,Y: ""The role of tightly bound ATP In Escherichia coli tRNA nucleotidyltransferase""Genes to Cells. 5. 689-698 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yokogawa,T: ""Characterization and tRNA Recognition of Mammalian Mitochondrial Seryl-tRNA Synthetase""J.Biol.Chem.. 275. 19913-19920 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yasukawa,T: ""Defect in modification at the anticodon wobble nucleotide of mitochondrial tRNA^<Lys> with the MERRF encephalomyopathy pathogenic mutation""FEBS Letters. 467. 175-178 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yasukawa,T: ""Modification Defect at Anticodon Wobble Nucleotide of Mitochondrial tRNAs^<Leu>(UUR) with Pathogenic Mutations of Mitochondrial Myopathy, Encephalopahty,Lactic Acidosis,and Stroke-like Episodes""J.Biol.Chem. 275. 4251-4257 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Tomita,T,,Ueda,T.and Watanabe,K.: "The presence of pseudouridine in the anticodon alters the genetic codeb : a possible mechanism for assignment of the AAA lysine codon as asparagine in echinoderm mitochondria"Nucleic Acids Research. 1683-1689

    • Related Report
      1999 Annual Research Report
  • [Publications] Ogawa,T.,Tomita,K.,Ueda,T.,Watanabe,K.,Uozumi,T.and Masaki,H.: "A cytotoxic ribonuclease targeting specific transfer RNA anticodons"Science. 283,. 2097-2100

    • Related Report
      1999 Annual Research Report
  • [Publications] Kondow,A.,Suzuki,T.,Yokobori,S.,Ueda,T.and Watanabe,K.: "An extra tRNA^<Gly>(U^*CU) found in ascidian mitochondria responsible for decoding non-universal codons AGA/AGG as glycine"Nucleic Acids Research. 27.. 2554-2559

    • Related Report
      1999 Annual Research Report
  • [Publications] Sasuga,J.,Yokobori,S.,Kaifu,M.,Ueda,T.,Nishikawa,K.and Watanabe,K.,: "Gene contents and organization of a mitochondrial DNA segment of the squid Loligo bleekeri"J.Mol.Evol.. 48,. 692-702

    • Related Report
      1999 Annual Research Report
  • [Publications] Tomita,K.,Ueda,T.,Ishiwa,S.,P.F.Crain,J.A.McCloskey and Watanabe,K.: "Codon reading patterns in Drosophila melanogaster mitochondria based on their tRNA sequences : a unique wobble rule in animal mitochondria"Nucleic Acids Research. 27,. 4291-4297

    • Related Report
      1999 Annual Research Report
  • [Publications] Yokobori,S.,Ueda,T.,G.F-Fuchs,S.Paabo,Ueshima,R.,Kondow,A.,Nishikawa,K.,Watanabe,K.: "Complete DNA sequence of mitochondrial genome of the ascidian Halocynthia roretzi(Chordata,Urochordata)"Genetics. 153,. 1851-1862

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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