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Development of automated synthesis of oligosaccharides based on solid-phase methodology

Research Project

Project/Area Number 11558080
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section展開研究
Research Field Bioorganic chemistry
Research InstitutionOsaka University

Principal Investigator

FUKASE Koichi  Graduate School of Science, Osaka University, Associate Professor, 大学院・理学研究科, 助教授 (80192722)

Project Period (FY) 1999 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥14,100,000 (Direct Cost: ¥14,100,000)
Fiscal Year 2001: ¥2,700,000 (Direct Cost: ¥2,700,000)
Fiscal Year 2000: ¥4,600,000 (Direct Cost: ¥4,600,000)
Fiscal Year 1999: ¥6,800,000 (Direct Cost: ¥6,800,000)
KeywordsSolid-phase synthesis / automated synthesis / oligosaccharide synthesis / protective group / glycosylation / linker / catch-and-release
Research Abstract

Solid-phase synthesis of oligosaccharides was investigated in order to develop automated synthesis of oligosaccharides. The most fundamental problem in solid-phase oligosaccharide synthesis is heterogeneity of polymer supports that causes insufficient glycosylation on solid support. Two new methods were developed for efficient solid-phase synthesis of oligosaccharides in the present study.
The one is a new catch-and-release method of isolation for products using a specific reaction. Desired compounds possessing the 4-azido-3-chlorobenzyl group were selectively isolated from a crude mixture by means of the facile reaction between the azido group and polymer-supported phosphine. This method was successfully applied to the solid-phase synthesis of an oligosaccharide elicitor. Glcβ1-3Glcβ1-3 (Glcβ1-6)Glcβ1-3Glc was synthesized via elongation of saccharide chain on solid-support, cleavage of the protected oligosaccharide from the resin, catch-and-release isolation, and final deprotection.
The other is selection of reactive region on polymer supports by using Sonogashira coupling reaction of glycosyl acceptors having an alkyne function with iodobenzamide on supports. Alkynylmethyl glycoside or alkyne ester was used as linker parts. These linkers were cleaved by treatment of Co_2(CO)_8 and TFA. The latter linker was also cleaved under basic conditions. The glycosylation reaction smoothly proceeded on the selected area of the supports to give the desired glycosides in quantitative yields.
Automated synthesis of oligosaccharides was carried out by using commercially available multipurpose synthesizer.

Report

(4 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] Minoru Izumi: "TMSCI as a Mild and Effective Source of Acidic Catalysis in Fischer Glycosidation and Use of Propargyl Glycoside for Anomeric Protection"Biosci. Biotechnol. Biochem.. 66\1. 211-214 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] kenji Egusa: "A new catch-and-release purification method using a 4-azido-3-chlorobenzyl group"Synlett. 2001\6. 777-780 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 深瀬 浩一: "効率的な糖鎖合成を目指して"有機合成化学協会誌. 59\5. 98-99 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] San-Qi Zhang: "Synthesis based on affinity separation (SAS) : seaparation of products having barbituric acid tag from untagged compounds by using hydrogen bond interaction"Synlett. 2001\5. 590-596 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] kenji Egusa: "Stereoselective Glycosylation and Oligosaccharide Synthesis on Solid Support Using a 4-Azido03-chlorovenzyl Group for Temporary Protection"Synlett. 2000-1. 27-32 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Koichi Fukase: "Novel Oxidatively Removable linker and Its Application to -Selective Solid-phase Oligosaccharide synthesis on a Macroporous Polystyrene Support"Synlett. 1999\7. 1074-1078 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Koichi Fukase: "Glycoscience, Chemistry and Chemical Biology, II"Springer. 40 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 深瀬 浩一: "コンビナトリアルサイエンスの新展開"シーエムシー出版. 13 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Minoru Izumi, Koich Fukase, Shoicni Kusumoto: "TMSCl as a Mild and Effective source of Acidic Catalysis in Fischer Glycosidation and Use of Propargyl Glycoside for Anomeric Protection"Biosci. Biotechnol. Biochem.. 66. 211 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kenji Egusa, Shoichi Kusumoto, Koichi Fukase: "A new catch-and-release purification method using a 4-azido-3-chlorobenzyl group"Synlett. 2001. 777

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] San-Qi Zhang, Koichi Fukase, Minoru Izumi, Yoshiyuki Fukase, Shoichi Kusumoto: "Synthesis based on affinity separation (SAS): separation of products having barbituric acid tag from untagged compounds by using hydrogen bond interaction"Synlett. 2001. 590

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yoshiyuki Fukase, Koichi Fukase, and Shoichi Kusumoto: "Propargyloxycarbonyl and Propargyl Groups for Protection of Amino, Hydroxy, and Carboxy Function"Peptide Science, ed. By N. Fujii, The Japanese Peptide Society. 93 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kenji Egusa, Yoshihiko Nakai, Koichi Fukase, Shoichi Kusumoto: "Stereoselective Glycosylation and Oligosaccharide Synthesis on Solid Support Using a 4-Azido-3-chlorobenzyl Group for Temporary Protection"Synlett. 2000. 27

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Koichi Fukase, Yoshihiko Nakai, Kenji Egusa, John A. Porco, Jr., Shoichi Kusumoto: "A Novel Oxidatively Removable Linker and Its Application to α-Selective Solid-phase Oligosaccharide Synthesis on a Macroporous Polystyrene Support"Synlett. 1999. 1074

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Koichi Fukase: "Combinatorial and Solid-Phase Methods in Oligosaccharide Synthesis"Glycoscience, Chemistry and Chemical Biology, ed. By B. Fraser-Reid, K. Tatsuta, J. Thiem,, Springer. (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Minoru Izumi: "TMSCl as a Mild and Effective Source of Acidic Catalysis in Fischer Glycosidation and Use of Propargyl Glycoside for Anomeric Protection"Biosci.Biotechnol.Biochem.. 66・1. 211-214 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kenji Egusa: "A new catch-and-release purification method using a 4-azido-3-chlorobenzyl group"Synlett. 6. 777-780 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 深瀬 浩一: "効率的な糖鎖合成を目指して"有機合成化学協会誌. 59・5. 98-99 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Koichi Fukase: "Glycoscience, Chemistry and Chemical Biology, II"Springer. 40 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 深瀬 浩一: "コンビナトリアルサイエンスの新展開"シーエムシー出版. 13 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kenji Egusa et al,: "Solid-phase Synthesis of Oligosacharides Using 4-azido-3-chlorbenzyl group for temporary protection of hydroxy functions"Synlett. 1(in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] San-qi Zhang et al,: "New Methodology for High-Throughput solution-phase Synthesis : Affimity Purification by Crown Ether and Ammonium Ion interaction"Tetrahedron Lett. 40・42. 7479-7483 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Koichi Fukase et al,: "A Novel Oxidatively Removable Linker and Its Application to α-Selective Solid-phase Oligosaccharide Synthesis on a Macroporous Polystyrene Support"Synlett. 7. 1074-1078 (1999)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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