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Diversity analysis of bacterial community in a strongly acid lake

Research Project

Project/Area Number 11640628
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 生態
Research InstitutionTohoku University

Principal Investigator

SHIKANO Shuichi  The Center for Northeast Asian Studies, Tohoku University, Associate Professor, 東北アジア研究センター, 助教授 (70154185)

Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2000: ¥900,000 (Direct Cost: ¥900,000)
Keywordsbactrial community / strongly acid lake / Lake Katanuma / hydrogen sulfide / circulation / stratification / 16S rRNA gene / phylogenetic classification / 硫黄酸化細菌
Research Abstract

1. The Lake Katanuma, a strongly acid lake, was surveyed during February 1998 to December 2000. The thermal pattern in the lake water showed dimictic, whereas the difference in water temperature between epilimnion and hypolimnion in summer was relatively small due to the volcanic heat supply from the lake bottom. During stratification in summer, the occasional circulations of whole lake water in a short term were observed in 1998 and 1999. Consequently, the condition of high concentration of hydrogen sulfide and oxygen depletion in hypolimnion spread over the whole lake. From September to December, the lake water circulated from the surface to the bottom. In 2000, however, the short-term circulation during summer stagnation was not observed. The occurrence of short-term circulations depends on the weather of that year.
2. The changes in the vertical distribution of bacterial biomass were influenced by the seasonal change in stagnation and circulation of lake water. In stratification period, high densities of filamentous bacteria and low abundance of short rods were observed. After the overturn in September, the biomass of filamentous bacteria decreased and that of short rods increased in the whole lake water.
3. Phylogenetic analyses of the sequences of 16S rRNA gene show that the strains isolated from lake water fell into proteobacteria alpha subdivision and gamma subdivision. The partial sequences of the strains belonging to alpha proteobacteria were closely related to that of Methylobacterium fujisawaense. The strains of gamma proteobacteria show distinct similarities to sequences of Lysobacter enzymogenes and the iron oxidizing lithotrophs, suggesting that these strains may act as autotrophs.
Further studies in terms of the phylogenetic analyses by rDNA sequences directly retrieved from the lake water are needed.

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (3 results)

All Other

All Publications (3 results)

  • [Publications] Shikano S.: "Effect at the ecosystem level of elevated atmospheric CO2 in an aquatic microcosm"Hydrobiologia. 436. 209-216 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Shikano S.: "Effect at the ecosystem level of elevated atmospheric CO2 in an aquatic microcosm"Hydrobiologia. 436. 209-216 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Shikano S.: "Effect at the ecosystem level of elevated atmospheric CO_2 in an aquatic microcosm"Hydrobiologia. 436. 209-216 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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