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Phylogeny of basal monocotyledons -as the first step to an investigation on non-synchronism between phenotype evolution and genotype evolution-

Research Project

Project/Area Number 11640701
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 系統・分類
Research InstitutionOsaka City University

Principal Investigator

TAMURA Minoru N.  Osaka City University, Graduate School of Science, Associate Professor, 大学院・理学研究科, 助教授 (20227292)

Co-Investigator(Kenkyū-buntansha) UEMATSU Chiyomi  Osaka City University, Graduate School of Science, Lecturer, 大学院・理学研究科, 講師 (30232789)
KATAYAMA Hironori  Kobe University, Faculty of Agriculture, Research Associate, 農学部, 助手 (50294202)
Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2000: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1999: ¥2,200,000 (Direct Cost: ¥2,200,000)
KeywordsmatK gene / rbcL gene / molecular phylogeny / monocotyledons / Liliaceae / Tofieldiaceae / Convallariaceae / chromosome / シュロソウ科 / キンコウカ科 / ショウブ科 / 核型
Research Abstract

In the present study, first, we revealed that a molecular phylogenetic tree based on DNA sequences of plastid matK gene provides much better resolution of major evolutionary relationships of the monocotyledons than a molecular phylogenetic tree based on DNA sequences of plastid rbcL gene. Second, using DNA sequences of both matK and rbcL genes, we constructed the molecular phylogenetic tree that provides the best resolution of major evolutionary relationships of the monocotyledons among molecular phylogenetic trees published until the present time as far as I know. And, we proved that Liliaceae are not monophyletic and can be divided into at least five lineages, i.e., Liliales, Asparagales, Tofieldiaceae, Nartheciaceae, and Petrosavia-group. In the matK + rbcL tree of the monocotyledons, Acorales is diverged as the first branch, followed successively by Alismatales-group (including Tofieldiaceae), Petrosavia-group, Dioscoreales-group (including Nartheciaceae), Liliales, Asparagales, an … More d Commelinales-group. And, we established a framework of a new classification of the monocotyledons based on molecular information.
Next, we reexamined taxonomy of the Tofieldiaceae, which are one of the most morphologically primitive monocotyledonous families and are important in considering the ancestral morphology of the monocotyledons. And, we concluded that the Isidrogalvia, which has fully connate carpels, should be transferred from the Tofieldiaceae to Nartheciaceae. After this transfer, the Tofieldiaceae correspond only to plants with almost free carpels, and the morphological primitiveness of the Tofieldiaceae became more definitive. The calyculus, which the Tofieldiaceae and Isidrogalvia share, turned out to have evolved in parallel in the lineages of Tofieldiaceae and Nartheciaceae.
Further, we revealed relationships among families, genera and species of the Convallariaceae (Asparagales) and their allied families, in which the taxonomy was quite controversial and the chromosomal characters are highly diversified, and estimated the direction of evolution of the chromosome numbers and karyotypes. Less

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (10 results)

All 2004 2000 Other

All Journal Article (8 results) Publications (2 results)

  • [Journal Article] Molecular phylogeny of monocotyledons inferred from combined analysis of plastid matK and rbcL gene sequences2004

    • Author(s)
      Tamara, M.N., Yamashita, J., Fuse, S., Haraguchi, M.
    • Journal Title

      Journal of plant Research 117

      Pages: 109-120

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Journal Article] Biosystematic studies on the family Tofieldiaceae I. Phylogeny and circumscription of the family inferred from DNA sequences of matK and rbcL2004

    • Author(s)
      Tamura, M.N., Fuse, S., Azuma, H., Hasebe, M.
    • Journal Title

      Plant Biology 6

      Pages: 562-567

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Journal Article] Phylogenetic analyses and chromosome evolution in Convallarieae(Ruscaceae sensu lato), with some taxonomic treatments2004

    • Author(s)
      Yamashita, J., Tamara, M.N.
    • Journal Title

      Journal of Plant Research 117

      Pages: 363-370

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Journal Article] Molecular phylogeny of monocotyledons inferred from combined analysis of plastid matK and rbcL gene sequences.2004

    • Author(s)
      Tamura, M.N., Yamashita, J., Fuse, S., Haraguchi, M.
    • Journal Title

      Journal of Plant Research 117(2)

      Pages: 109-120

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Journal Article] Biosystematic studies on the family Tofieldiaceae I. Phylogeny and circumscription of the family inferred from DNA sequences of matK and rbcL.2004

    • Author(s)
      Tamura, M.N., Fuse, S., Azuma, H., Hasebe, M.
    • Journal Title

      Plant Biology 6(5)

      Pages: 562-567

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Journal Article] Phylogenetic analyses and chromosome evolution in Convallarieae (Ruscaceae sensu lato), with some taxonomic treatments.2004

    • Author(s)
      Yamashita, J., Tamura, M.N.
    • Journal Title

      Journal of Plant Research 117(5)

      Pages: 363-370

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Journal Article] A phylogenetic analysis of the plastid matK gene with emphasis on Melanthiaceae sensu lato2000

    • Author(s)
      Fuse, S., Tamara, M.N.
    • Journal Title

      Plant Biology 2

      Pages: 415-427

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Journal Article] A phylogenetic analysis of the plastid matK gene with emphasis on Melanthiaceae sensu lato.2000

    • Author(s)
      Fuse, S., Tamura, M.N.
    • Journal Title

      Plant Biology 2(4)

      Pages: 415-427

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Fuse,S.and Tamura,M.N.: "A phylogenetic analysis of the plastid matK gene with emphasis on Melanthiaceae sensu lato"Plant Biology. 2・4. 415-427 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Fuse, S. and Tamura, M. N.: "A phylogenetic analysis of the plastid matK gene with an emphasis on Melanthiaceae sensu lato"Plant Biology. (in press). (2000)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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