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Development of a rice targeting system towards a study of epigenetic gene expression.

Research Project

Project/Area Number 11660011
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Breeding science
Research InstitutionNational Institute for Basic Biology

Principal Investigator

TERADA Rie  Okazaki National Research Institute, National Institute for Basic Biology, Research Associate, 基礎生物学研究所, 助手 (30137799)

Co-Investigator(Kenkyū-buntansha) YOSHISHIGE Inagaki  Okazaki National Research Institute, National Institute for Basic Biology, Research Associate, 基礎生物学研究所, 助手 (50280764)
Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2000: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 1999: ¥2,100,000 (Direct Cost: ¥2,100,000)
Keywordstargeting / rice / Agrobacterium transformation / diphtheria toxin protein / negative selection marker / DT-A chain gene / Waxy / DFR / ターゲッティング
Research Abstract

In order to study molecular mechanism of epigenetic phenomena caused by gene transformation, gene targeting system will serve as a powerful instrument for manipulation of genes without changing the loci of the genes in question. The objective of research is to develop a rice targeting system towards a study of epigenetic gene expression of rice Waxy and DFR (dihydroflavonol-4-reductase) genes. Since gene targeting is induced through homologous recombination, targeting vector includes homologous sequences of Waxy or DFR genes with its flanking sequences in addition to a positive (hygromycin phosphotransferase (hph)) and negative selection markers. The Waxy and DFR genes and its flanking sequences were cloned from Japonica rice ver. Shimokita and ver. Murasakiine respectively. By using these clones targeting vectors for Waxy and DFR loci were constructed. Positive and negative selection is generally used in mouse gene targeting to choose out rarely caused homologous recombination among a … More huge number of illegitimate recombinations. We have chosen the diphtheria toxin (DT) A chain gene as a negative selection marker. In order to treat a huge number of transformation events we have established a highly effective transformation system via Agrobacterium. Compared to general method about 10 times higher frequency of trans formation was obtained by our improved method, in which parameters about Agrobacterium inoculation were optimized. By using the high frequency rice transformation method the lethal effect for rice calli of the negative selection marker of DT gene was analyzed. More than 99% of mortality of rice calli transformed with the DT gene was observed. Based on these highly effective transformation system via Agrobacterium and the positive and negative selection, the Waxy targeting vector was applied for gene targeting. Average 50〜60 calli were survived among 500〜2000 transformation events induced in one time of experiment. In order to find out gene targeting event PCR analysis of these survived calli is on going. These results strongly suggest that the combination of the developed methods of transformation and of positive negative selection described above, have much possibility to be a powerful system for gene targeting of rice plant. Less

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (17 results)

All Other

All Publications (17 results)

  • [Publications] 寺田理枝,李洪清,稲垣善茂,飯田滋: "高頻度の形質転換効率を示すイネ・アグロバクテリウム法の開発"育種学研究. 1巻・別冊2. 69 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Inagaki,Y.,Johzuka-Hisatomi,Y.,Mori,T.,Takahashi,S.,Hayakawa,Y.,Peyachoknagui,S.,Ozeki,Y.,Ida,S.: "Genomic organization of the genes ancoding dihydrohavonol 4-reductase pigmentation in the Japaniese and common morning giories."Gene. 226. 181-188 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tarada,R.,Nakajima,M.,Okagaki,R.J.,Wessier,S.R.,and Shimamoto,K.: "Antisense Waxy genes with highly active promoters effectively suppress Waxy gene expression in transgenic rice."Plant Cell Physiol.. 41. 881-888 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ignacimuthu,S.,Arockiasamy,S.,and Terada,R.: "Genetic transformation of rice : Current status and future prospects"Current Science. 79. 186-195 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Iida,S.,Hoshino,A.,Johzuka-Hisatomi,Y.,Habu,Y.,Inagaki,Y.: "Floricultural traits and transposable elements in the Japanese and common morning glories."Annals of the new york academy of sciences. 870. 265-274 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 寺田理枝,飯田滋: "モデル植物ラボマニュアル(監修:島本功,岡田清孝,岩渕雅樹)"シュプリンガー・フェアラーク東京株式会社. 17 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Inagaki, Y., Johzuka-Hisatomi, Y., Mori, T., Takahashi, S., Hayakawa, Y., Peyachoknagul, S., Ozeki, Y., Iida, S.: "Genomic organization of the genes encoding dihydroflavonol 4-reductase for flower pigmentation in the Japaniese and common morning glories."Gene. VOL.226, No.2. 181-188 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Terada, R., H-Q.Li., Y.Inagaki, S.Iida: "Development of a highly effective transformation method of rice based on the Agrobacterium mediated transformation"Breeding Research. VOL.1, No.2. 69 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Terada, R., Nakajima, M., Isshiki, M., Okagaki, R.J., Wessler, S.R., Shimamoto, K.: "Antisense Waxy genes with highly active promoters effectively suppress Waxy gene expression in transgenic rice."Plant Cell Physiol.. VOL.41, No.7. 881-888 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ignacimuthu, S., Arockiasamy, S., Terada, R.: "Genetic transformation of rice : Current status and future prospects."Current Science. VOL.79, No.2. 186-195 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Iida, S., Hoshino, A., Johzuka-Hisatomi, Y., Habu, Y., Inagaki, Y.: "Floricultural traits and transposable elements in the Japanese and common morning glories"Annals of the new york academy of sciences. VOL.870. 265-274 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Inagaki,Y.,Johzuka-Hisatomi,Y.,Mori,T.,Takahashi,S.,Hayakawa,Y.,Peyachoknagul,S.,Ozeki,Y.,Iida,S.: "Genomic organization of the genes encodingdihydroflavonol 4-reductase for flower pigmentation in the Japanese andcommon morning glories."Gene.. 226. 181-188 (1999)

    • Related Report
      2000 Annual Research Report
  • [Publications] Terada,R.,Nakajima,M.,Isshiki,M.,Okagaki,R.J.,Wessler,SR.,and Shimamob,K.: "Antisense Waxy genes with highly active promoters effectively suppress Waxy gene expression in transgenic rice."Plant Cell Physiol.. 41. 881-888 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Ignacimuthu,S.,Arockiasamy,S.,and Terada,R.: "Genetic transformation of rice : Current status and future prospects"Current Science. 79. 186-195 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Iida,S.,Hoshino,A.,Johzuka-Hisatomi,Y.,Habu,Y.,Inagaki,Y.: "Floricultural traits and transposable elements in the Japanese and common morning glories."Ann.N.Y.Acad.Sci.Symposium,"Molecular strategies in biological evolution ; Proceedings of the NYASC"New York,USA.27-29th June 1998.. 870. 265-274 (1999)

    • Related Report
      2000 Annual Research Report
  • [Publications] 寺田理枝,李 洪清,稲垣善茂,飯田 滋: "高頻度の形質転換効率を示すイネ・アグロバクテリウム法の開発"育種学研究. 1巻・別冊2. 69 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 寺田理枝,飯田 滋: "モデル植物 ラボマニュアル-基礎編-(仮題)"シュプリンガー・フェアラーク東京株式会社. 17 (2000)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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