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S-allele genotype of apple cultivars and establishment process for self-incompatibility

Research Project

Project/Area Number 11660025
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 園芸・造園学
Research InstitutionGifu University

Principal Investigator

MATSUMOTO Shogo  Gifu Univ., Associate Prof., 教育学部, 助教授 (90241489)

Project Period (FY) 1999 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2001: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2000: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 1999: ¥2,400,000 (Direct Cost: ¥2,400,000)
KeywordsApple / Self-incompatibility / Malus / S-locus / S-allele / PCR-RFLP / Rosaceae / Cross-incompatibility / S遺伝子型 / バラ科植物 / S-RNase / PCR
Research Abstract

( 1 ) The S-locus genes ( Sd-, Sh-, Se- and Si-RNase ) in the pistil were cloned and sequenced from the apple (Malus x domestica Borkh. ) cultivars. We developed an S-allele-specific polymerase chain reaction ( PCR )-restrictioon fragment length polymorphism ( RFLP ) analysis method for identification of the S-alleles. Using that method, we analyzed S-genotype of 136 apple cultivars and selections.
( 2 ) The St- and Sg'-RNase CDNA were cloned from Malus trcmsitoria. S-allele genotypes of nine Malus species were identified by S-allele-specific PCR-RFLP analyzes.
( 3 ) New S-RNases, Sg and Sh-RNase, and Sf-RNase show a strong similarity ( 93-94 % ) to each other at the deduced amino acid level. There are only two to six amino-acid differences among HV regions responsible for the S-allele specificity of Sf, Sg and Sh.
( 4 ) Sg'-RNase differed by one amino acid from that of Sg-RNase. A difference of one amino acid within HV regions produced by natural mutation was not enough to generate a new S-allele. However, the model ofMaton et al. ( 1999 ) on establishing novel S-alleles was supported by one amino acid difference since S_g-allele could recognize both S_g- and S_g- alleles.
( 5 ) Based on the phylogenetic analysis of S-RNases, it was speculated that the polymorphic S-RNases in apple were generated before divergence into the genera Malus and Pyrus.

Report

(4 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] S.Matsumoto: "A functional S-allele, 'Sg', in the wild apple possessing a single amino acid, S-RNase 'Sg'-RNase', different from 'Sg-RNase'in Malus x domestica cultivars"Journal of Horticultural Science & Biotechnology. 76. 163-166 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S.Matsumoto: "Phylogenetic analysis of genus Rosa : polyphyly of section Pimpinellifoliae and origin of Rosa x fortuniana Lindl"Acta Horticulturae. 547. 357-363 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S.Matsumoto: "Genomic DNA sequences encoding Malus x domestica Borkh. "Akane" "Delicious" and Malus transitoria S-RNases"DNA sequence. (印刷中).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K.Kitahara: "Sequence of the S_<10> cDNA from 'McIntosh' apple and a PCR-digestion identification method"HortScience. (印刷中).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Matsumoto,S., Komori,S., Kitahara,K., Imazu,S., and Soejima,J.: "S-genotypes of 15 apple cultivars and self-compatibility of 'Megumi'."J. Japan Soc. Hort. Sci.. 68. 236-241 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Matsumoto,S., and Kitahara,K.: "Discovery of a new self- incompatibility allele in apple"HortScience. 35. 1329-1332 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kitahara,K., Soejima,J., Komatsu,H., Fukui,H., and Matsumoto,S.: "Complete sequences of the S-genes Sd- and Sh- RNase _CDNA in apple"HortScience. 35. 712-715 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Matsumoto,S., Kitahara,K., Komatsu,H., and Soejima,J.: "A functional S-allele, 'Sg', in the wild apple possessing a single amino acid, S-RNase ' Sg'-RNase', different from 'Sg-RNase' in Mains x domestica cultivars"Journal of Horticultural Science and Biotechnology. 76. 163-166 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Matsumoto,S., Hayashi,S., Kitahara,K., and Soejima,J.: "Genomic DNA sequences encoding Malm x domestica Borkh. "Akane", "Delicious" md Malus transitoria S-RNases."DNA sequence. in press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kitahara,K., and Matsumoto,S.: "Sequence of the S_<10> cDNA from 'Mclntosh' apple and a PCR-digestion identification method"HortScienc. in press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S.Matsumoto: "A functional S-allele, 'Sg', in the wild apple possessing a single amino acid, S-Rnase 'Sg'-Rnase, different from 'Sg-Rnase' in Malus x domestica cultivars"Journal of Horticultural Science & Biotechnology. 76. 163-166 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] S.Matsumoto: "Phylogenetic analysis of genus Rosa : polyphyly of section Pimpinellifoliae and origin of Rosa x fortuniana Lindl"Acta Horticulturae. 547. 357-363 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] S.Matsumoto: "Genomic DNA sequences encoding Malus x domestica Borkh. "Akane","Delicious" and Malus transitoria S-Rnases"DNA sequence. (印刷中).

    • Related Report
      2001 Annual Research Report
  • [Publications] K.Kitahara: "Sequence of the S_<10>cDNA from 'McIntosh' apple and a PCR-digestion identification method"HortScience. (印刷中).

    • Related Report
      2001 Annual Research Report
  • [Publications] K.Kitahara: "Complete sequences of the S-genes'Sd-'and 'Sh-RNase'cDNA in apple."HortScience. 35. 712-715 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Matsumoto: "Possible involvement of a new S-gene'St-RNase'(Accession No.AB035928)in the wild apple possessing high similarity to'S3-'and'S5-RNase'in the Japanese pear."Plant Physiol.. 122. 620-620 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Matsumoto: "Discovery of a new self-incompatibility allele in apple"HortScience. 35. 1329-1332 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Matsumoto: "S-genotypes of 15apple cultivars and self-compatibility of 'Megumi'."J.Japan Soc.Hort.Sci.. 68. 236-241 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] S.Matsumoto: "A new S-allele in apple,'Sg',and its similarity to the 'Sf'allele from 'Fuji'."HortScience. 34. 708-710 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] K.Kitahara: "Cloning and sequencing of a new S-gene'Sg-RNase'(Accession No.AB019184)from Malus x domestica Borkh.'Indo'."Plant Physiol.. 119. 1567-1567 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] K.Kitahara: "Complete sequences of the S-genes'Sd-' and 'Sh-RNase'cDNA in apple."HortScience. (印刷中).

    • Related Report
      1999 Annual Research Report
  • [Publications] S.Matsumoto: "Phylogenetic analyses of the subgenus Eurosa using the ITS nrDNA sequence."Acta Horticulturae. (印刷中).

    • Related Report
      1999 Annual Research Report
  • [Publications] K.Kitahara: "Rose MADS-box genes'MASAKO CI and DI'homologous to class C floral identify gene."Plant Science. (印刷中).

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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