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Analysis of mechanisms of regulation of aspartate kinase and lysine biosyntheseis in Thermus thermophilus

Research Project

Project/Area Number 11660072
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionTHE UNIVERSITY OF TOKYO

Principal Investigator

NISHIYAMA Makoto  Biotechnology Research Center, THE UNIVERSITY OF TOKYO Associate professor, 生物生産工学研究センター, 助教授 (00208240)

Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2000: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 1999: ¥2,700,000 (Direct Cost: ¥2,700,000)
Keywordslysine biosynthetic pathway / Thermus thermophilus / aspartate kinase / αaminoadipate pathway / タンパク質工学 / フィードバック阻害
Research Abstract

Aspartate kinase catalyzes the transfer of the γ-phosphate group of ATP to aspartic acid. That is the first step of the biosynthetic pathway for lysine, threonine, and methionine, and is known to be regulated by the end-metabolites through feedback inhibition. We identified amino acid residues involved in the catalytic reactions through site-directed mutagenesis of those conserved in aspartate kinases using Thermus aspartate kinase. For further understanding of the function and regulation in aspartate kinase, gene encoding aspartate kinase III, which is regulated by simultaneous presence of lysine and threonine, was cloned from Bacillus subtilis. All the aspartate kinases so far investigated are oligomaeric enzymes, while aspartate kinase III was found to be a monomer. This may suggest simple mechanism for the feedback inhibition in aspartate kinase III.Through the analyses on lysine-auxotrophic mutants and DNA fragment complementing the auxotrophy, lysine was shown to be synthesized through α-aminoadipate as an intermediate in T.thermophilus. Analysis of a gene cluster involved in the lysine biosynthesis suggested that the lysine biosynthesis through α-aminoadipate in Thermus thermophilus is not the same as that found in the lower eukaryotes, but is the mixture of the biosynthetic pathways for leucine and arginine. Cloned ArgD homolog, termed LysJ, catalyzed the reaction using an arginine pathway-related compound as the substrate for lysine synthesis. On the other hand, LysJ preferred N-acetylornithine an intermediate of arginine biosynthesis, to N-acetyllysine, the putative substrate in the lysine biosynthesis. All these results indicate that the lysine biosynthesis is evolutionarily related to the arginine biosynthesis.

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (15 results)

All Other

All Publications (15 results)

  • [Publications] Kobashi,N.: "Aspartate kinase-independent lysine synthesis in an extremely thermophilic bacterium, Thermus thermophilus : Lysine is synthesized via α-aminoadipic acid not via diaminopimelic acid"Journal of Bacteriology. 181・6. 1713-1718 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Kobashi,N.: "Kinetic and mutation analyses of aspartate kinase from Thermus flavus"Journal of Bioscience and Bioengineering. 87・6. 739-745 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nishida,H.: "A prokaryotic gene cluster involved in synthesis of lysine through the amino adipate pathway : A key to resolve evolution of amino acid biosynthesis"Genome Research. 9. 1715-1718 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nishida,H.: "What is characteristic of fungal lysine synthesis through the α-aminoadipate pathway?"Journal of Molecular Evolution. 51・3. 299-302 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Kobashi,N.: "Characterization of aspartate kinase III from Bacillus subtilis"Bioscience, Biotechnology, and Biochemistry. 65(印刷中). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Kobashi, N.et al.: "Aspartate kinase-independent lysine synthesis in an extremely thermophilic bacterium, Thermus thermophilus : Lysine is synthesized via α-aminoadipic acid not via diaminopimelic acid"Journal of Bacteriology. 181(6). 1713-1718 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Kobashi, N.et al.: "Kinetic and mutation analyses of aspartate kinase from Thermus flavus"Journal of Bioscience and Bioengineering. 87(6). 739-745 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nishida, H.et al.: "A prokaryotic gene cluster involved in synthesis of lysine through the amino adipate pathway : a key to evolution of amino acid biosynthesis"Genome Research. 9. 1715-1718 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nishida H.et al.: "What is characteristic of fungal lysine synthesis through the α-aminoadipate pathway?"Journal of Molecular Evolution. 51(3). 299-302 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Kobashi, N.et al.: "Characterization of aspartate kinase III from Bacillus subtilis"Bioscienace, Biotechnolgy, and Biochemistry. 65(in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nishida,H.: "What is characteristic of fungal lysine synthesis through the a-aminoadipate pathway?"Journal of Molecular Evolution. 51・3. 299-302 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kobashi,N.: "Characterization of aspartate kinase III from Bacillus subtilis"Bioscience, Biotechnology, and Biochemistry. 65(印刷中). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kobashi, N.: "Aspartate kinase-independent lysine synthesis in an extremely thermophilic bacterium, Thermus thermophilus : Lysine is synthesized via α-aminoadipic acid not via diaminopimelic acid"Journal of Bacteriology. 181(6). 1713-1718 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kobashi, N.: "Kinetic and mutation analyses of aspartate kinase from Thermus flavus"Journal of Bioscience and Bioengineering. 87(6). 739-745 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Nishida, H.: "A prokayotic gene cluster involved synthesis of lysine through the amino adipate pathway:Akey to resolve evolution of amino acid biosynthesis"Genome Research. 9. 1175-1183 (1999)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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