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Rapid molecular identification of imported mycoses in Japan

Research Project

Project/Area Number 11670259
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Bacteriology (including Mycology)
Research InstitutionChiba University

Principal Investigator

MIKAMI Yuzuru  Research Center for Pathogenic Fungi and Microbial Toxicoses, Chiba University Professor, 真菌医学研究センター, 教授 (40092100)

Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥2,700,000 (Direct Cost: ¥2,700,000)
Fiscal Year 2000: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 1999: ¥1,500,000 (Direct Cost: ¥1,500,000)
KeywordsImported mycoses / gene analysis / PCR primer / genotypes / ITS region / 病原真菌 / 遺伝子 / PCRプライマー / Paracoccidioides / Cryptococcus
Research Abstract

Coupled with the large increase in Japanese internationalization, a number of Japanese people have had opportunities to go abroad for oversea travel or work purposes. However, frequently it has been reported that some of them had suffered from serious fungal endemics peculiar to the countries such as East Asia (Thailand, China, Indonesia), USA, Brazil and others. These infections are called as imported mycoses : coccidioidomycosis, histoplasmosis, penicilliosis mameffei and paracoccidioidomycosis. Since these causative agents are very dangerous to handle (class 3), simple and safe identification and diagnostic systems are requested in clinical laboratory.
In this project, preparation of simple and safty molecular identification system for the etiological agents of these imported fungal infection (H.casulatum, P.mameffei, P.brasiliensis and C.neoformans) was aimed. 1) Phylogeny of twenty nine geographically diverse H.capsulatum isolates representing the three varieties, var.capsulatum, duboisii and farciminosum were evaluated using (ITS) region (ITS1-5.8S rDNA-ITS2) sequence analyses, and we found that the ITS region contained sufficient information to resolve the phylogenetic relationship among the fungal isolates. 2) Based on the ITS region sequence information, a new PCR primer (designed to amplify 418 bp) was prepared for the molecular identification of P.brasiliensis. 3) ITS region analysis of allowed us to distinguish all isolates of C.neoformans var.gattii into four geographic groups. 4) Usefulness of PCR primer pairs for P.mameffei (developed by our research group) was also confirmed.
Thus newly prepared PCR primer pairs for each etiological agent of imported mycoses in Japan were simple and found to be useful for the molecular identification in clinical laboratory.

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] Aoki FH et al.: "New PCR primer pairs specific for Cryptococcus neoformans serotype A or B Prepared on the bases of random amplified polymorphic DNA fingerprint pattern analysis"Journal of Clinical Microbiology. 37. 315-320 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Imai T et at.: "Identification and characterization of a new intermediate in the ribosylative Inactivation pathway of rifampin by Mycobacterium smegmatis"Microbial Drug Resistance. 5. 259-263 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Imai T et al.: "Geographic grouping of Cryptococcus neoformas var. gattii by random amplified plymorphic DNA fingerprint patterns and ITS sequence divergence"Clinical Laboratory. 46. 345-354 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tamura M et al.: "New PCR primer pairs specific for Candida dubliniensiss and detection of the fungi from the Candida albicans clinical isolates in Japan"Clinical Laboratory. 46. 33-40 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Imai T et al.: "A new PCR primer for the identification of Paracoccidioides brasiliensis based on RNA sequences coding the ITS and 5.8S regions"Medical Mycology. 38. 323-326 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Mikami Y.et al.: "A new antifungal macrolide component, brasilinolide B, produced by Nocardia brasiliensis"Journal of Antibiotics. 53. 70-74 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Yang H-C et al.: "Extrusion of fluorescein diacetate by multi-drug resistant Candida albicans"Mycoses. (in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Watanabe K. et al.: "Molecular identification of a clinical isolate of non-pigmented and asporogenic Aspergillus fumitatus strain which can not be identified by traditional morphological methods"Japanese Journal of Medical Mycology. (in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Aoki et al.: "New PCR primers specific for Cryptococcus neoformans serotype A or B prepared on the bases of random amplified polymophic DNA fingerprint pattern analysis."Journal of Clinical Microbiology. 37. 315-320 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Imai T et al: "Indentification and characterization of a new intermediate in the ribosylative inacitivation pathway of rifampin by Mycobacterium smegmatis"Microbial Drug Resistance. 5. 259-263 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Imai T et al: "Geographic grouping of Cryptococcus neoformans var.gattii by random amplified polymorphic DNA fingerprint patterns and ITS sequence divergence"Clinical Laboratory. 46. 345-354 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tamura M et al: "New PCR primer pairs specific for Candida dubliniensis and detection of the fungi from the Candida albicans clinical isolates in Japan"Clinical Laboratory. 46. 33-40 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Imai T et al: "A new PCR primer for the identification of Paracoccidioides brasiliensis based on RNA sequences coding the ITS and 5.8S region"Medical Mycology. 38. 323-326 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Mikami Y et al: "A new antifungal macrolide, brasilinolide B, produced by Nocardia brasiliensis"Journal of Antibiotics. 53. 70-74 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Yang H-C et al: "Extrusion of fluorescein diacetate by multi-drug resistant Candida albicans"Mycoses. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Watanabe K et al: "Molecular identification of a clinical isolate of non-pigmented and asporogenic Aspergillus fumigatus strain which can not be identified by traditional morphological method"Japanese Journal of Medical Mycology. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Imae T et al.,: "Geographic grouping of Cryptococcus neoformas var.gattii by random amplified plymorphic DNA fingerprint patterns and ITS sequence divergence"Clinical Laboratory. 46. 345-354 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Tamura M et al.: "New PCR primer pairs specific for Candida dubliniensis and detection of the fung from the Candida albicans clinical isolates in Japan"Clinical Laboratory. 46. 33-40 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Imai T et al.: "A new PCR primer for the identification of Paracoccidioides brasiliensis based on RNA sequences coding the ITS and 5.8S regions"Medical Mycology. 38. 323-326 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Mikami Y. et al.: "A new antifungal macrolide component, brasilinolide B, produced by Nocardia brasiliensis"Journal of Antibiotics. 53. 70-74 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yang H-C et al.: "Extrusion of fluorescein diacetate by multi-drug resistant Candida albicans"Mycoses. (in press).

    • Related Report
      2000 Annual Research Report
  • [Publications] Watanabe K. et al.: "Molecular identification of a clinical isolate of non-pigmented and asporogenic Aspergillus fumitatus strain which can not be identified by traditional morphological methods"Japanese Journal of Medical Mycology. (in press).

    • Related Report
      2000 Annual Research Report
  • [Publications] Myoken Y et al.: "Antifungal susceptibility of Aspergillus species isolated from invasive oral infection in neutropenic patients with hematologic malignancies"Oral Surg Oral Med Oral Pathol Oral Radiol Endod. 87. 174-179 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Aoki FH et al.: "New PCR primer pairs specific for Cryptococcus neotormans serotype A or B prepared on the basis of random amplifed polymorphic DNA fingerprint pattern analysis"J Clin Microbiol. 37. 315-320 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 小島正裕 他: "フルコナゾール耐性Candida albicansに対するDO870の抗真菌活性"真菌誌. 40. 209-215 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 別所涼子 他: "真菌性角膜潰瘍"日本の眼科. 70. 1149-1152 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Yang HC et al.: "Extrusion of fluorescein diacetate by multidrug-resistant Candida albicans"Mycoses. (in press). (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Tamura M 他: "New PCR Primer pairs specific for Candida dubliniensis and detection of the fungi from the Candida albicans clinical isolates in Japan"Clinical Laboratory. 46. 33-40 (2000)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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