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Study on the RNA Helicase Activity of the Flavivirus NS3 Proteins

Research Project

Project/Area Number 11670299
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Virology
Research InstitutionInstitute of Tropical Medicine, Nagasaki University

Principal Investigator

IGARASHI Akira  Nagasaki University Professor, 熱帯医学研究所, 教授 (40029773)

Co-Investigator(Kenkyū-buntansha) SHIMIZU Hiroyuki  Institute of Infectious Diseases Senior Researcher, ウイルス第2部, 厚生技官 (90270644)
HASEBE Futoshi  Nagasaki University Research Associate, 熱帯医学研究所, 助手 (20253693)
MORITA Kouichi  Nagasaki University Associate Professor, 熱帯医学研究所, 講師 (40182240)
TADANO Masayuki  Ryukyu University Assistant Professor, 医学部, 助教授 (80179712)
Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2000: ¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 1999: ¥1,800,000 (Direct Cost: ¥1,800,000)
KeywordsJEV / RNA belicase / ATPase / NS3 protein / RNA belicase
Research Abstract

The NS3 protein of Japanese encephalitis virus (JEV) contains motifs typical of RNA Helicase/NTPase but no RNA helicase activity has been reported for this protein. To identify and characterize the RNA helicase activity of JEV NS3, a truncated form of the protein with His-tag was expressed in Escherichia coli and purified. The purified JEV NS3 protein showed an RNA helicase activity, which was dependent on divalent cations and ATP This result indicate that the C-terminal 457 residues are sufficient to exhibit the RNA helicase activity of JEV NS3. Several amino acid substitutions were introduced at the DExH motif of JEV NS3, Asp-285 and Glue-286 were found essential for both ATPase and RNA helicase activities. Cys-287 was critical for the RNA helicase activity of JEV NS3 but not for ATPase activity. Mutagenesis at His-288 of JEV NS3 revealed that His was the most preferable amino acid for ATPase activity and Ala, Gly, Asn, Gln, Ser, or Arg could partly substitute for it. However, any other mutation at His-288 completely disrupted the RNA helicase activity of JEV NS3. The results suggested that Cys-287 and His-288 are essential residues especially for the RNA helicase activity of JEV NS3 and ATPase and helicase activities are separable enzymatic functions.

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (14 results)

All Other

All Publications (14 results)

  • [Publications] Andi Utama et al: "Identification and characterization of the RNA helicase activity of Japanese encephalitis virus NS3 protein"FEBS Letters. 465. 74-78 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Andi Utama et al: "Role of the DExH Motif of the Japanese Encephalitis Virus and Hepatitis C Virus NS3 Protoins in the ATPase and RNA Helicase Activites"Virology. 273. 316-324 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Pandey B.D. et al.: "Severity-related molecular differences among nineteen strains of dengue type 2 viruses"Microbiol.Immunol.. 44. 179-188 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Pandey B.D. et al.: "Molecular evolution, distribution and genetic relationship among the dengue 2 viruses isolated from different clinical severity"Southeast Asian J.Trop Med Publ.Health. 33. 266-272 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Corazon C.Buerano et al: "IgM-Capture ELISA of Serum Samples Collected from Filipino Dengue Patients"Southeast Asian J.Trop Med Publ.Health. 30. 524-529 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Beti E.D.Soemanto et al: "Infection of Dengue 2 Virus Isolated from Patients Exhibit Different Disease Severities to Human Peripheral Blood Leukocytes and Production of Cytokines in the Infected Culture Supernatant"Southeast Asian J.Trop Med Publ.Health. 30(4). 729-734 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Andi Utama, Hiroyuki Shimizu, Shigeru Morikawa, Futoshi Hasebe, Kouichi Morita, Akira Igarashi, Masahiro Hatsu, Kazuhiro Tokamizawa, Tatsuo Miyamura: "Identification and characterization of the RNA helicase activity of Japanese encephalitis virus NS3 protein."FEBS Letters. 465. 74-78 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Andi Utama, Hiroyuki Shimizu, Futoshi Hasebe, Kouichi Morita, Akira Igarashi, IkuoShoji, Yoshiharu Matsuura, Masahiro Hatsu, Kazuhiro Takamizawa, Akio Hagiwara and Tatsuo Miyamura.: "Role of the DExH Motif of the Japanese Encephalitis Virus and Hepatittis C Virus NS3 Proteins in the ATPase and RNA Helicase Activities."Virology. 273. 316-324 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Pandey B.D., Igarashi A: "Severity-related molecular differences among nineteen strains of dengue type 2 viruses"Microbiol.Immunol.. 44. 179-188 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Pandey B.D., Morita K., Hosebe F., Parquet M.C., Igarashi A: "Molecular evolution, distribution and genetic relationship among the dengue 2 viruses isolated from different clinical severity"Southeast Asian J.Trop Med Publ.Heath.. 33. 266-272 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Corazon C Buerano, Ima Nurisa Ibrahim, Rodolfo C Contreras, Futoshi Hasebe: "Dengue Network Philippines, Ronald R Matias, Filipinas F Natividad and Akira Igarashi IgM-Capture ELISA of Serum Samples Collected from Filipino Dengue Patients"Southeast Asian J Trop Med Public Health. 30. 524-529 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Beti Emawati Dewi Soemanto, Futoshi Hasebe and Akira Igarashi: "Infection of Dengue 2 Virus Strains Isolated from Patients Exhibit Different Disease Severities to Human Peripheral Blood Leukocytes and Production of Cytokines in the Infected Culture Supernatant"Southeast Asian Trop Med Public Health. 30(4). 729-734 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Andi Utama et al.: "Role of the DExH Motif of the Japanese Encephalitis Virus and Hepatitis C Virus NS3 Proteins in the ATPase and RNA Helicase Activites"Virology. 273,. 316-324 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Andi Utama et al.: "Identification and characterization of the RNA helicase activity of Japanese encephalitis virus NS3 protein"FEBS Letters. 465. 74-78 (2000)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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