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Identification of diseasen causing gene in patients with permanent isolated proximal renal tubular acidosis with ocular abnormalities

Research Project

Project/Area Number 11670741
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Pediatrics
Research InstitutionThe University of Tokyo

Principal Investigator

IGARASHI Takashi  The University of Tokyo Professor, 医学部・附属病院, 教授 (70151256)

Co-Investigator(Kenkyū-buntansha) INATOMI Jun  Kyorin University School of Medicine Lecturer, 医学部・薬理学, 助手 (00311960)
Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2000: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 1999: ¥1,800,000 (Direct Cost: ¥1,800,000)
KeywordsNa^+ / HCO3^- cotransporter / SLC4A4 / proximal renal tubular acidosis / short stature / glaucoma / missense mutation / nonsense mutation / HCO3^- cotransporter / SLC4AC / 白内障 / 帯状角膜変性症
Research Abstract

Permanent isolated proximal renal tubular acidosis (pRTA) with ocular abnormalities is a systemic disease with short stature, isolated pRTA and ocular abnormalities. We have reported two homozygous inactivating missense mutations (R298S and R510S) of kidney Na^+/HCO3^- cotransporter (NBC-1a) gene (SLC4A4) in two unrelated Japanese patients with permanent isolated pRTA with glaucoma, cataract, and bandkeratopathy (Nature Genet 23 : 264-266, 1999). This time, we screened the NBC-1a cDNA from the peripheral lymphocyte of a patient with permanent isolated pRTA and bilateral glaucoma and have identified homozygous mutation, C to T transitions at nucleotide 234, resulting in the formation of stop codon at codon 29. This homozygous mutation, Q29X, was identified in the unique 5' end of SLC4A4 of the patient. Cosegregation of this Q29X mutation with the disease and heterozygosity in the affected mother and father were identified, and the absence of this mutation in 156 alleles from 78 Japanese individuals indicated that this mutation is directly related to the disease and it is not a common DNA sequence polymorphism. This nonsense mutation predicts truncated NBC-1a that lacks the 1,007 amino acids, and the effect up on NBC-1a is likely to be a loss of function. In contrast, this mutaton predicts not to have an effect upon NBC-1b (pancreas NBC). Our result have implications for understanding the role of NBC-1a in the pathophysiology of pRTA and ocular abnormalities such as cataracts, glaucoma and bandkeratopathy.

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (10 results)

All Other

All Publications (10 results)

  • [Publications] Shiohara M, Igarashi T: "Genetic and long term data on a patient with permanent isolated proximal renal tubular acidosis."Eur J Pediatr. 159. 892-894 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Igarashi T: "Unraveling the molecular basis of hereditary renal tubular acidosis."Clin Exp Nephrol. (in print). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Igarashi T: "A novel nonsense mutation in the Na^+/HCO^3^- cotronsporter gene in a patient with permanent isolated proximal renal tubular acidosis and nilateral glaucoma."J Am Soc Nephrol. (in print). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Shiohara M, Igarashi T: "Genetic and long-term data on a patient with permanent isolated proximal renal tubular acidosis."Eur J Pediatr. 159. 892-894 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Igarashi T, Inatomi J: "Unraveling the molecular basis of hereditary renal tubular acidosis."Clin Exp Nephrol. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Igarashi T, Inatomi J: "A novel nonsense mutation in the Na+/HCO_3- cotransporter gene (SLC4A4) in a patient with permanent isolated proximal renal tubular acidosis and bilateral glaucoma."J Am Soc Nephrol. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Shiohara M, Igarashi T: "Genetic and long term data on a patient with permanent isolated proximal renal tubular acidosis."Eur J Pediatr. 159(12). 892-894 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Igarashi T: "Unraveling the molecular basis of hereditary renal tubular acidosis. "Clin Exp Nephrol. (in print). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Igarashi T: "A novel nonsense mutation in the Na^+/HCO3^-cotransportor gene in a patient with permanent isolated proximal renal tubular acidosis and bilateral glaucoma."J Am Soc Nephrol. (in print). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Igarashi T, et al.: "Mutations in SLC4A4 cause permanent isolated proximal renal tubular acidosis with ocular abnormalities"Nature Genet. 23(11). 264-266 (1999)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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