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Development of the Efficient Synthetic Method for Nucleosides labeled with Stable Isotopes and Their Application to Structural Analysis of the Complex of a DNA with a Drug

Research Project

Project/Area Number 11672117
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemical pharmacy
Research InstitutionTokyo University of Pharmacy and Life Science

Principal Investigator

KAWASHIMA Etsuko  Tokyo University of Pharmacy and Life Science, School of Pharmacy, Associate Professor, 薬学部, 助教授 (30057343)

Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥2,700,000 (Direct Cost: ¥2,700,000)
Fiscal Year 2000: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1999: ¥1,900,000 (Direct Cost: ¥1,900,000)
Keywordsnucleosides labeled with Stable Isotopes / complex of a DNA with a drug / [5'-^<13>C]nucleoside / highly diastereoselectiv (2'R)-2'-deoxy [2-^2H]guanosine / D-[5-^2H]ribofuranose / 標識DNA / distamycin誘導体の認識 / [5'-^2H_1][5'-^<13>C]ヌクレオシド / 高ジアステレオ選択的 / (2'R)-2'-デオキシ[2'-^2H]グアノシンの合成 / 票識DNAと医薬品の複合体
Research Abstract

For the elucidation of the recognition mechanism of a DNA with a drug, the studies were performed as follows ; 1. the structural analysis of the complex of a [5'-^<13>C]DNA with Tallimustine (distamycin analogue) by NMR spectroscopy and 2. the development of the efficient methodology for the synthesis of 2'-deoxyribonucleosides site-specifically and diastereoselectivly labeled with ^<13>C and/or ^2H at their 5'- or 3'-positions. On the first study, the analysis of a d(C^*G^*C^*G^*A^*A^*T^*T^*C^*G^*C^*G)_2 {N^* : [5'-^<13>C]nucleotide} provided us with the correlation between C5'(i)-C6H(i-1) or -C8H(i), the sequential NOEs and unambiguous assignment of all the signals. We extend these results to NMR study of the complex of [5'-^<13>C]DNA with Tallimustine (distamycin analogue). The structural information on surrounded by H5' protons in a complex of these drug with a DNA has not been obtained, because of the difficulty of the assignment for H5' proton signals. We have overcome this problem by NMR analysis of a complex of [5'-^<13>C]DNA with a drug. Information obtained from our studies should aid in the investigation of sequence-specific DNA-protein or -drug recognition processes.
On the second studies, we achieved the development of the efficient methodology for the synthesis of (2'R)-2'-deoxy[2-^2H]guanosine and D-[5-^2H]ribofuranose derivative. Moreover, we found that a significant role of the phenylcarbamoyl protecting group in the asymmetric dihydroxylation reaction of the unsubstituted allyl alcoholic system using AD-mix-α and -β was confirmed to afford remarkably high enantioselectivity (>99% ee).

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (9 results)

All Other

All Publications (9 results)

  • [Publications] Etsuko Kawashima,: "Highly Enantioselective Osmium Dihydroxylation of Unsubstituted Allyl N-Phenylcarbamate Using AD-mix Reagents"Tetrahedron Lett.. 41. 3903-3906 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Etsuko Kawashima: "Study on highly diastereoselective synthesis of (2'R)-2'-deoxy[2'-^2H] guanosine"Nucleic Acids Symp.Series.. 44. 25-26 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Etsuko Kawashima: "The Synthesis of 2'-Deoxy [5'-^<13>C] ribonucleotides and HMQC-NOESY NMR Study on the Dickerson Dodecamer with 13C-Labeling at the 5'-Positions."Nucleosides & Nucleotides,. 18. 1597-1598 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Etsuko Kawashima: "Structural Analysis of the Complex of a Distamycin Analogue with the Dickerson Dodecamer ^<13>C Labeled at 5'-carbons Using NMR Spectroscopy"Nucleic Acides Symp.Ser.. 42. 187-188 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] "The Synthesis of 2'-Deoxy[5'-^<13>C]ribonucleotides and HMQC-NOESY NMR Study on the Dickerson Dodecamer with ^<13>C-Labeling at the 5'-Positions."Nucleosides & Nucleotides. 18. 1597-1598 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] "Highly Enantioselective Osmium Dihydroxylation of Unsubstituted Allyl N-Phenylcarbamate Using AD-mix Reagents"Tetrahedron Lett.. 41. 3903-3906 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] "Structural Analysis of the Complex of a Distamycin Analogue with the Dickerson Dodecamer ^<13>C Labeled at 5'-carbons Using NMR Spectroscopy"Nucleic Acides Symp.Ser.. No.42. 187-188 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] "Study on highly diastereoselective synthesis of (2'R)-2'-deoxy[2'-^2H]guanosine"Nucleic Acids Symp.Series. No 44. 25-26 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Etsuko Kawashima,Yuh-ki Naito,and Yoshiharu Ishido: "Highly Enantioselective Osmium Dihydroxylation of Unsubstituted Allyl N-Phenylcarbamate Using AD-mix Reagents"Tetrahedron Lett.. 41. 3903-3906 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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