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Initiator titration as a mechanism for regulation of initiation of DNA replication

Research Project

Project/Area Number 11680675
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionNagoya University

Principal Investigator

OGAWA Tohru  Nagoya University, Graduate School of Science, Associate Professor, 大学院・理学研究科, 助教授 (80109256)

Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥2,900,000 (Direct Cost: ¥2,900,000)
Fiscal Year 2000: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1999: ¥1,500,000 (Direct Cost: ¥1,500,000)
KeywordsDNA replication / DnaA / oriC / initiation of replication / datA / 複製 / イニシエーター / 大腸菌染色体
Research Abstract

Replication of the Escherichia coli chromosome is initiated at a unique site, oriC.Concturrent initiations occur at all oriC sites present in a cell once and only once per cell cycle. A mechanism to ensure the cyclic initiation events operates through the chromosomal site, datA, which is a 1-kb segment located at 94.7 min on the genetic map and titrates exceptionally large amounts of the bacterial initiator protein, DnaA.A strain lacking datA grew normally but exhibited the asynchronous initiation phenotype due to extra initiation events.
In the present study, seven other DnaA-binding sites were examined for their possible involvement in the control of replication initiation. Disruption of the seven sites did not affect the timing of initiation of replication, even when all of them were disrupted simultaneously. Thus, datA seems to be a unique chromosomal element that appears to adjust a balance between free and bound DnaA for the single initiation event at a fixed time in the bacterial cell cycle. Titration of DnaA to newly duplicated datA during oriC sequestration, which is mediated by hemimethylated GATC sequences in oriC and the SeqA protein, would contribute to prevent reinitiations when oriC is desequestered.
Mutation either in the second or in the third DnaA box (a 9-bp DnaA-binding sequence) in datA were enough to induce the mutant phenotype. Other three DnaA boxes in datA seemed to have no effect on the datA function. The second and the third DnaA boxes may act as cores for the cooperative binding of DnaA to the entire datA region.
Regulatory inactivation of DnaA (RIDA) is another mechanism known to prevent untimely extra initiations. We found that RIDA operates independent from DnaA titration to datA.This suggests that these two mechanisms may play complementary roles during the cell cycle to ensure the scheduled initiation.

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (6 results)

All Other

All Publications (6 results)

  • [Publications] Toru Ozaki: "Anomalous DnaA protein binding to the regulatory region of the Escherichia coli aldA gene"Microbiology. 147. 153-159 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tsutomu Katayama: "Multiple pathways regulating DnaA function in Escherichia coli : Distinct rolesfor DnaA titration by datA locus and the regulatory inactivation of DanA"Biochimie. 83. 1-5 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ozaki, T., Kumaki, Y., Kitagawa, R..and Ogawa, T.: "Anomalous DnaA protein binding to the regulatory region of the Escherichia coli aldA gene"Microbiology. 147. 153-159 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Katayama, T., Fujimitsu, K.and Ogawa, T.: "Multiple pathways regulating DnaA function in Escherichia coli : Distinct roles for DnaA titration by the datA locus and the regulatory inactivation of DnaA"Biochimie. 83. 1-5 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Toru Ozaki: "Anomalous DnaA protein binding to the regulatory region of the Escherichiacoli aldA gene"Microbiology. 147. 153-159 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Tsutomu Katayama: "Multiple pathways regulating DnaA function in Escherichiacoli : Distinct roles for DnaA titration by datA locus and the regulatory inactivation of DnaA"Biochimie. 83. 1-5 (2001)

    • Related Report
      2000 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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