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Functional characterization of TFIID subunits (TAFs) in Saccharomyces cerevisiae

Research Project

Project/Area Number 11680680
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionNARA INSTITUTE OF SCIENCE AND TECHNOLOGY

Principal Investigator

KOKUBO Tetsuro  Nara Institute of Science and Technology, Graduate School of Biological Sciences, Associate Professor, バイオサイエンス研究科, 助教授 (10271587)

Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥3,700,000 (Direct Cost: ¥3,700,000)
Fiscal Year 2000: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1999: ¥2,300,000 (Direct Cost: ¥2,300,000)
Keywordstranscription / tanscriptional regulation / TFIID / TAF / general transcription factor / yeast / basal transcription / core promoter
Research Abstract

The general transcription factor TFIID, which is composed of a TATA-binding protein (TBP) and a set of TBP-associated factors (TAFs), has been shown to be involved in both core promoter recognition and the transcriptional activation of eukaryotic genes. We isolated TAF145 temperature-sensitive mutants in yeast, in which transcription of the TUB2 gene is impaired at restrictive temperatures due to a defect in core promoter. We also showed in these mutants that the transcription of the RPS5 gene is impaired, mostly due to a defect in transcriptional activation rather than to a defect in core promoter recognition, although the latter is slightly affected as well. Surprisingly, the RPS5 core promoter can be activated by various activation domains fused to a GAL4 DNA binding domain (e.g. GAL4-RAP1, -VP16C, -EBNA2, and -GCN4), but not by the original upstream activating sequence (UAS) of the RPS5 gene. In addition, a heterologous CYC1 core promoter can be activated by RPS5-UAS at normal levels even in these mutants. These observations indicate that a distinct combination of core promoters and activators may exploit alternative activation pathways which vary in their requirement for TAF 145 function. In addition, a particular function of TAF 145 that is deleted in our mutants appears to be involved in both core promoter recognition and transcriptional activation

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (15 results)

All Other

All Publications (15 results)

  • [Publications] A.Kobayashi,T.Miyake,Y.Ohyama,M.Kawaichi,T.Kokubo: "Mutations in the TATA binding protein, affecting transcriptional activation, show synthetic lethality with the TAF145 gene lacking the TAFN-terminal domain in Saccharomyces cerevisiae"Journal of Biological Chemistry. 276・1. 395-405 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Y.Tsukihashi,T.Miyake,M.Kawaichi,T.Kokubo: "Impaired core promoter recognition caused by novel yeast TAF145 mutations can be restored by creating a canonical TATA element within the promoter region of the TUB2 gene"Molecular and Cellular Biology. 20・7. 2385-2399 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] T.Kotani,K-i.Banno,M.Ikura,A.G.Hinnebusch,Y.Nakatani,M.Kawaichi,T.Kokubo: "A role of transcriptional activators as anti-repressors for the auto-inhibitory activity of TATA box binding of TFIID"Proc.Natl.Acad.Sci.USA. 97・13. 7178-7183 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] C.R.Lim,Y.Kimata,H.Ohdata,T.Kobubo,N.Kikuchi,T.Horigome,K.Kohno: "The Saccharomyces cerevisiae RuvB-like protein, tih2p.is required for cell cycle progression and RNA polymerase II-directed transcription"Journal of Biological Chemistry. 275・29. 22409-22417 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Kobayashi, A., Miyake, T., Ohyama, Y., Kawaichi, M., and Kokubo, T.: "Mutations in the TATA binding protein, affecting transcriptional activation, show synthetic lethality with the TAF145 gene lacking the TAF N-terminal domain in Saccharomyces cerevisiae."Journal of Biological Chemistry. 276-1. 395-405 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Tsukihashi, Y., Miyake, T., Kawaichi, M., and Kokubo, T.: "Impaired core promoter recognition caused by novel yeast TAF145 mutations can be restored by creating a canonical TATA element within the promoter region of the TUB2 gene"Molecular and Cellular Biology.. 20-7. 2385-2399

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Kotani, T., Banno, K-i., Ikura, M., Hinnebusch, A.G., Nakatani, Y., Kawaichi, M., _and Kokubo, T.: "A role of transcriptional activators as anti-repressors for the auto-inhibitory activity of TATA box binding of TFIID"Proc.Natl.Acad.Sci.USA. 97-13. 7178-7183

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Lim, C.R., Kimata, Y., Ohdate, H., Kokubo, T., Kikuchi, N., Horigome, T., and Kohno, T.: "The Saccharomyces cerevisiae RuvB-like protein, tih2p, is required for cell cycle progression and RNA polymerase II-directed transcription"Journal of Biological Chemistry. 275-29. 22409-22417

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] A.Kobayashi,T.Miyake,Y.Ohyama,M.Kawaichi,T.Kokubo: "Mutations in the TATA binding protein, affecting transcriptional activation, show synthetic lethality with the TAF145 gene lacking the TAF N-terminal domain in Saccharomyces cerevisiae"Journal of Biological Chemistry. 276・1. 395-405 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Y.Tsukihashi,T.Miyake,M.Kawaichi,T.Kokubo: "Impaired core promoter recognition caused by novel yeast TAF145 mutations can be restored by creating a canonical TATA element within the promoter region of the TUB2 gene"Molecular and Cellular Biology. 20・7. 2385-2399 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] T.Kotani,K-i.Banno,M.Ikura,A.G.Hinnebusch,Y.Nakatani,M.Kawaichi,T.Kokubo: "A role of transcriptional activators as anti-repressors for the auto-inhibitory activity of TATA box binding of TFIID"Proc.Natl.Acad.Sci.USA. 97・13. 7178-7183 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] C.R.Lim,Y.Kimata,H.Ohate,T.Kokubo,N.Kikuchi,T.Horigome,K.Kohno: "The Saccharomyces cerevisiae RuvB-like protein, tih2p, is required for cell cycle progression and RNA polymerase II-directed transcription"Journal of Biological Chemistry. 275・29. 22409-22417 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Tsukihashi Y et al: "Impaired core promoter recognition caused by novel yeast TAF145 mutations can by restored by creating a canonical TATA element within the promoter region of the TUB2 gene"Molecular and Cellular Biology. 20(7)(印刷中). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Miura S et al: "Total inhibition of high shear stress induced platelet aggregation by homodimeric von Willebrand factor A1-loop fragments"British Journal of Haematolosy. 105(4). 1092-1100 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Matsumoto M et al: "The cDNA cloning of human placental ecto-ATP diphosphohydrolases I and II"FEBS Letters. 453(3). 335-340 (1999)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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