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Mechanism of membrane fusion by fusion protein

Research Project

Project/Area Number 11694096
Research Category

Grant-in-Aid for Scientific Research (B).

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionHimeji Institute of Technology

Principal Investigator

NAITO Akira  Department of Life Science, Himeji Institute of Technology Associate Professor, 理学部, 助教授 (80172245)

Co-Investigator(Kenkyū-buntansha) SAITO Hazime  Department of Life Science, Himeji Institute of Technology Professor, 理学部, 教授 (30100150)
Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2000: ¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 1999: ¥2,000,000 (Direct Cost: ¥2,000,000)
KeywordsInfluenza virus / Solid state NMR / Fusion peptide / lipid bilayer / α-helix / Neutron scattering / Chemical shifts / Biomembrane / 膜融合活性蛋白質 / プロトンポンプ / メリチン / αーヘリックス / ^<31>P NMR / 磁場配向
Research Abstract

In this research project, we have studied to understand the molecular mechanism of viral infectn using influenza fusion peptides. We have particularly focused to determine the structure and orientation of the peptides bund to the membrane. Following results were obtained in this research project.
(1) The conformation and dynamics of melittin bound to the dimyristoylphophatidylcholin (DMPC) bilayer and the magnetic orientation in the lipid bilayer systems were investigated by solid-state ^<31>P and ^<13>C NMR spectroscopy. Using ^<31>P NMR, it was found that melittin-DMPC bilayer system forms magnetically oriented elongated vesicles with the long axis parallel to the magnetic field above the liquid crystalline-gel phase transition temperature. ^<13>C NMR spectra were observed on the ^<13>C labeled melittin bound to the lipid bilayers. Finally, it was found that melittin adopts a transmembrane α-helix whose average axis is parallel to the bilayer normal.
(2) N-terminal fragment of HA2 (1-27) in influenza virus was synthesized and investigated by solid state NMR spectroscopy. It was found that the N-terminal part of the fragment forms α-helix and showed different behavior of interaction with membrane at acidic pH from that at basic pH condition.
(3) Transmembrane fragment of M2 protein of influenza virus (M2-TMP) was synthesized and investigated by means of ^<15>N solid state NMR spectroscopy. The results indicate that the α-helical axis is tilting by 33° and 37° from the bilayer normalin the DOPC and DMPC bilayer systems, respectively.
(4) Membran insertion behavior of influenza fusion peptide was investigated by a neutron scattering method. The results indicate that the helical axis is tilting by 55° from the bilayer normal and the helix is located around the surface of bilayers.

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (56 results)

All Other

All Publications (56 results)

  • [Publications] S.Tuzi: "Localization of a Cation Binding Site in the Loop between Helices F and G of Bacteriorhodopsin, as Studied by ^<13>C NMR,"Biophys.J.. 76. 1523-1531 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] M.Kamihira: "Phenyl Ring Dynamics of Enkephalin Molecules and Behavior of Bound Solvents in the Crystalline State by ^2H NMR Spectroscopy,"J.Phys.Chem.A.. 103. 3356-3363 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] M.Tanio: "Long-distance Effects of Site-directed Mutations on Backbone Conformation in Bacteriorhodopsin, from Solid State NMR of [1-^<13>C] Val-labeled Proteins,"Biophys.J.. 77. 431-442 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] M.Tanio: "Conformational Changes of Bacteriorhodopsin along the Proton-conduction Chain as Studied with ^<13>C NMR of [3-^<13>C] Ala-labeled Protein : Arg 82 May Function as Information Mediator,"Biophys.J.. 77. 1577-1584 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.Nishimura: "Analysis of Dipolar Dephasing Pattern in I-Sn Multispin System for Obtaining the Information of Molecular Packing and Its Application to Crystalline N-Acetyl-Pro-Gly-Phe by REDOR Solid State NMR,"J.Phys.Chem.. 77. 431-442 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] A.Naito: "Conformation and dynamics of melittin bound to magnetically oriented lipid bilayers by solid-state ^<31>P and ^<13>C NMR spectroscopy"Biophys.J.. 78. 2405-2417 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] M.Kamihira: "Conformational transition and fibrillation mechanism of human calcitonin as studied by high-resolution solid-state ^<13>C NMR"Protein Science. 9. 867-877 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Yamaguchi: "Irreversible conformational change of bacterio-opsin induced by binding of retinal during its reconstitution of bacterio-opsin, as studied by ^<13>C NMR"J.Biochem.. 127. 861-869 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Nakatsuji: "Novel photo-responsive organic spin systems : preparation and properties of norbornadienes and spiropyrans with TEMPO radical substituents"J.Chem.Soc.,Perkin Trans.. 2. 1969-1975 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] J.Kimura: "Determination of N-H bond lengths of ^<15>N-labeled poly (L-alanines) by ^1H CRAMPS NMR"Macromolecules. 18. 6627-6629 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] J.Bolze: "Small angle X-ray scattering and ^<31>P NMR studies on the phase behavior of phospholipid bilayered mixed micelles"Chem.Phys.Lett.. 329. 215-220 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Y.Kawase: "Alteration of conformation and dynamics of bacteriorhodopsin induced by protonation of Asp85 and deprotonation of Schiff base as studied by ^<13>C NMR"Biochemistry. 47. 14472-14480 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] H.Saito: "Conformation and backbone dynamics of bacteriorhodopsin revealed by ^<13>C NMR"Biochim.Biophys.Acta. 1460. 39-48 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Kimura: "A ^<13>C NMR study on [3-^<13>C]-[1-^<13>C] Val labeled transmembrane peptides of bacteriorhodopsin in lipid bilayers : insertion, rigid-body motions at ambient temperature"Biopolymers. 58. 78-88 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.Nishimura: "Natural abundance ^<13>C REDOR coupled to a singly ^<15>N-labeled nucleus : simulaneous determination of interatomic distances in crystalline ammonium [^<15>N] L-glutamate monohydrate"J.Mol.Struct.. 560. 29-38 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Yamaguchi: "Surface dynamics of Bacteriorhodopsin as revealed by ^<13>C NMR studies on [^<13>C] Ala-labeled protein : Determination of millisecond or microsecond motions in interhelical loops and C-terminal α-helix"J.Biochem. 129. 373-382 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Yamaguchi: "Cytoplasmic surfacee structure of bacteriorhodopsin consisting of interhelical loops and C-terminal a-helices modified by a variety of environmental factors as studied by ^<13>C NMR"Eur.J.Biochem.. (in press). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Kimura: "Characterization of α-helix structures in polypeptides, revealed by ^<13>C=O…H-^<15>N hydrogen bond lengths determined by ^<13>C REDOR NMR"J.Mol.Struct.. (in press). (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Tuzi: "Location of a cation-binding site in the loop between helices F and G of bacteriorhodopsin as studied by ^<13>C NMR"Biophys.J.. 76. 1523-1531 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] M.Kamihira: "Phenyl ring dynamics of enkephalin molecules and behavior of bound solvents in the crystalline states by ^2H NMR spectroscopy"J.Phys.Chem.B.. 103. 3356-3363 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] M.Tanio: "Long-distance effects of site-directed mutations on backbone conformation in bacteriorhodopsin from solid state NMR of [1-^<13>C]Val-labeled proteins"Biophys.J.. 77. 431-442 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] M.Tanio: "Conformational changes of bacteriorhodopsin along the proton-conduction chain as studied with ^<13>C NMR of [3-^<13>C]Ala-labeled protein : Arg^<82> may function as an information mediator"Biophys.J.. 77. 1577-1584 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.Nishimura: "Analysis of dipolar dephasing pattern in I-S_n multispin system for obtaining the information of molecular packing and its application to crystalline N-acetyl-Pro-Gly-Phe by REDOR solid state NMR"J.Phys.Chem.B. 77. 431-442 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] A.Naito: "Conformation and dynamics of melittin bound to magnetically oriented lipid bilayers by solid-state ^<31>P and ^<13>C NMR spectroscopy"Biophys.J.. 78. 2405-2417 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] M.Kamihira: "Conformational transitions and fibrillation mechanism of human calcitonin as studied by high resolution solid state ^<13>C NMR"Protein Science. 9. 867-877 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] H.Saito: "Conformation and backbone dynamics of bacteriorhodopsin revealed by ^<13>C NMR"Biochim.Biophys.Acta. 1460. 39-48 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Yamaguchi: "Irreversible conformational change of bacterio-opsin induced by binding of the retinal in the in vitro folding to bacteriorhodopsin, as studied by ^<13>C NMR"J.Biochem.. 127. 861-869 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Nakatsuji: "Novel photo-responsive organic spin systems : preparation and properties of norbornadienes and spiropyrans with TEMPO radical substituents"J.Chem.Soc., Perkin Trans.. 2. 1969-1975 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] H.Kimura: "Determination of N-H bond lengths of ^<15>N-labeled poly(L-alanines) by ^1H CRAMPS NMR"Macromolecules. 18. 6627-6629 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] J.Bolze: "Small angle X-ray scattering and ^<31>P NMR studies on the phase behavior of phospholipid bilayered mixed micelles"Chem.Phys.Lett.. 329. 215-220 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Y.Kawase: "Alteration of conformation and dynamics of bacteriorhodopsin induced by protonation of Asp85 and deprotonation of Schiff base as studied by ^<13>C NMR"Biochemistry. 47. 14472-14480 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Kimura: "A ^<13>C NMR Study on [3-^<13>C]-, [1-^<13>C]Ala or [1-^<13>C]Val-labeled transmembrane peptides of bacteriorhodopsin in lipid bilayers : insertion, rigid-body motions and local conformational fluctuations at ambient temperature"Biopolymers. 58. 78-88 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] K.Nishimura: "Natural abundance ^<13>C REDOR coupled to a singly ^<15>N-labeled nucleus : simulaneous determination of interatomic distances in crystalline ammonium [^<15>N] L-glutamate monohydrate"J.Mol.Struct.. 560. 29-38 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Yamaguchi: "Surface dynamics of Bacteriorhodopsin as revealed by ^<13>C NMR studies on [^<13>C]Ala-labeled protein : Determination of millisecond or microsecond motions in interhelical loops and C-terminal α-helix"J.Biochem. 129. 373-382 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Yamaguchi: "Cytoplasmic surfacee structure of bacteriorhodopsin consisting of interhelical loops and C-terminal a-helices modified by a variety of environmental factors as studied by ^<13>C NMR"Eur.J.Biochem.. (in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] S.Kimura: "Characterizationof α-helix structures in polypeptides, revealed by ^<13>C=O…H-^<15>N hydrogen bond lengths determined by ^<13>C REDOR NMR"J.Mol.Struct.. (in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] A.Naito: "Conformation and dynamics of melittin bound to magnetically oriented lipid bilayers by solid-state ^<31>P and ^<13>C NMR spectroscopy"Biophys.J.. 78. 2405-2417 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] M.Kamihira: "Conformational transition and fibrillation mechanism of human calcitonin as studied by high-resolution solid-state ^<13>C NMR"Protein Science. 9. 867-877 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Yamaguchi: "Irreversible conformational change of bacterio-opsin induced by binding of retinal during its reconstitution of bacterio-opsin, as studied by ^<13>C NMR"J.Biochem.. 127. 861-869 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Nakatsuji: "Novel photo-responsive organic spin systems : preparation and properties of norbornadienes and spiropyrans with TEMPO radical substituents"J.Chem.Soc.,Perkin Trans.. 2. 1969-1975 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] H.Kimura: "Determination of N-H bond lengths of ^<15>N-labeled poly (L-alanines) by ^1H CRAMPS NMR"Macromolecules. 18. 6627-6629 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] J.Bolze: "Small angle X-ray scattering and ^<31>P NMR studies on the phase behavior of phospholipid bilayered mixed micelles"Chem.Phys.Lett.. 329. 215-220 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Y.Kawase: "Alteration of conformation and dynamics of bacteriorhodopsin induced by protonation of Asp85 and deprotonation of Schiff base as studied by ^<13>C NMR"Biochemistry. 47. 14472-14480 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] H.Saito: "Conformation and backbone dynamics of bacteriorhodopsin revealed by ^<13>C NMR"Biochim.Biophys.Acta. 1460. 39-48 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Kimura: "A ^<13>C NMR study on [3-^<13>C]-.[1-^<13>C] Val labeled transmembrane peptides of bacteriorhodopsin in lipid bilayers : insertion, rigid-body motions at ambient temperature"Biopolymers. 58. 78-88 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] K.Nishimura: "Natural abundance ^<13>C REDOR coupled to a singly ^<15>N-labeled nucleus : simulaneous determination of interatomic distances in crystalline ammonium [^<15>N] L-glutamate monohydrate"J.Mol.Struct.. 560. 29-38 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Yamaguchi: "Surface dynamics of Bacteriorhodopsin as revealed by ^<13>C NMR studies on [^<13>C] Ala-labeled protein : Determination of millisecond or microsecond motions in interhelical loops and C-terminal α-helix"J.Biochem.. 129. 373-382 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Yamaguchi: "Cytoplasmic surfacee structure of bacteriorhodopsin consisting of interhelical loops and C-terminal a-helices modified by a variety of environmental factors as studied by ^<13>C NMR"Eur.J.Biochem.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Kimura: "Characterization of α-helix structures in polypeptides, revealed by ^<13>C=O…H-^<15>N hydrogen bond lengths determined by ^<13>C REDOR NMR"J.Mol.Struct.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Tuzi: "Location of a cation-binding site in the loop between helices F and G of bacteriorhodopsin as studied by ^<13>C NMR"Biophys.J.. 76. 1523-1531 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] M.Kamihira: "Phenyl ring dynamics of enkephalin molecules and behavior of bound solvents in the crystalline states by ^2H NMR spectroscopy"J.Phys.Chem.. 103. 3356-3363 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] M.Tanio: "Long-distance effects of site-directed mutations on backbone conformation in bacteriorhodopsin from solid state NMR of [1-^<13>C]Val-labeled proteins"Biophys.J.. 77. 431-442 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] M.Tanio: "Conformational changes of bacteriorhodopsin along the proton-conduction chain as studied with ^<13>C NMR of[3-^<13>C]Ala-labeled protein:Arg^<82> may function as an information mediator"Biophys.J.. 77. 1577-1584 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] K.Nishimura: "Analysis of dipolar dephasing pattern in I-S* multispin system for obtaining the information of molecular packing and its application to crystalline N-acetyl-Pro-Gly-Phe by REDOR solid state NMR"J.Phys.Chem.. 103. 8398-8404 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] A.Naito: "Conformation and dynamics of melittin bound to magnetically oriented lipid bilayers by solid state ^<31>P and ^<13>C NMR spectroscopy"Biophys.J. 78(in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] M.Kamihira: "Conformational transitions and fibrillation mechanism of human calcitonin as studeied by high resolution solid state ^<13>C NMR"Protein Science. (in press). (2000)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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