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Preservation of dissoloved organic matter in the Ocean

Research Project

Project/Area Number 11694197
Research Category

Grant-in-Aid for Scientific Research (B).

Allocation TypeSingle-year Grants
Section一般
Research Field Environmental dynamic analysis
Research InstitutionKYOTO UNIVERSITY (2000)
The University of Tokyo (1999)

Principal Investigator

NAGATA Toshi  Kyoto University, Center for Ecological Research, Professor, 生態学研究センター, 教授 (40183892)

Co-Investigator(Kenkyū-buntansha) SUZUKI Satoshi  Ehime University, Center for Marine Environmental Studies, Professor, 沿岸環境科学研究センター, 教授 (90196816)
TANOUE Eiichiro  Nagoya University, Institute for Hydrospheric Atmospheric Science, Professor, 大気水圏科学研究所, 教授 (50133129)
KOGURE Kazuhiro  University of Tokyo, Ocean Research Institute, Associate Professor, 海洋研究所, 助教授 (10161895)
Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥4,900,000 (Direct Cost: ¥4,900,000)
Fiscal Year 2000: ¥2,300,000 (Direct Cost: ¥2,300,000)
Fiscal Year 1999: ¥2,600,000 (Direct Cost: ¥2,600,000)
KeywordsBacteria / Ocean / Dissolved organic matter / Peptidoglycan / Biopolymer / Ectoenzyme / Radio-tracer / Subarctic / 溶存有機炭素 / 炭素循環 / 微生物 / 分解
Research Abstract

1. Recent studies have demonstrated that organic polymers derived from bacteria accumulate in seawater, yet the dynamics of this large pool of dissolved organic matter has been poorly understood. This study examined the turnover and transformation of peptidoglycan-a major constituent of dissolved organic nitrogen in oceanic waters.
2. A new methodology was developed to isolate and purify paptidoglycan from marine bacteria.
3. It was succeeded in preparing radio-labeled peptidoglycan. By using this material, a new assay technique was developed to examine turnover and transformation of peptidoglycan in natural seawater.
4. The measurements of peptidoglycan degradation in a wide variety of marine environments demonstrated the uncoupling of hydrolysis and uptake of peptidoglycan.
5. Ectoenzyme activities (peptidase and glucosidase) were determined in the subarctic Pacific. Results revealed a dramatic shift in the vertical profile of activity ratios along the east-west axis of the investigated region.
6. Bacterial biomass and activity were determined in meso-and bathypalagic environments. Our results suggested that sinking particles are actively solubilized to release dissolved and colloidal polymers in deep oceanic environments.
7. A descriptive model was developed to explain the release and accumulation of organic polymers derived from bacteria.

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (17 results)

All Other

All Publications (17 results)

  • [Publications] Nagata,T.,Fukuda,H.,Fukuda,R.and Koike,I.: "Bacterioplankton distribution and production in deep Pacific waters : Large-scale geographicvariations and possible coupling with sinking particle fluxes."Limnology and Oceanography. 45. 426-435 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Fukuda,R.,Sohrin,Y.,Saotome,N.,Fukuda,H.,Nagata,T.and Koike,I.: "East-west gradient in ectoenzyme activities in the subarctic Pacific : Possible regulation by zinc."Limnology and Oceanography. 45. 930-939 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata,T.: "Production mechanisms of dissolved organic matter."Kirchman,D.L.(ed.) "Microbial Ecology of the Oceans". 121-152 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata,T.and Kirchman,D.L.: "Bacterial mortality : A pathway for the formation of refractory DOM?"Bell,C.R.,Brylinsky,M,and Johnson-Green,P.(eds.)"Microbial Biosystems : New Frontiers-Proceedings of the 8th International Symposium on Microbial Ecology". (in print). (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata,T.: ""Picopellets" Produced by phagotrophic nanoflagellates : Role in the material cycling within marine environments."Handa,N.,Tanoue,E. and Hama,T.(eds.) "Dynamics and Characterization of Marine Organic Matter". 241-256 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata, T., Fukuda, H., Fukuda, R.and Koike, I.: "Bacterioplankton distribution and production in deep Pacific waters : Large-scale geographic variations and possible coupling with sinking particle fluxes."Limnologyand Oceanography. 45. 426-435 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Fukuda, R., Sohrin, Y., Saotome, N., Fukuda, H., Nagata, T.and Koike, I.: "East-west gradient in ectoenzyme activities in the subarctic Pacific : Possible regulation by zinc."Limnology and Oceanography. 45. 930-939 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata, T.: "Production mechanisms of dissolved organic matter."Kirchman, D.L.(ed.)"Microbial Ecology of the Oceans". 121-152 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata, T.and Kirchman, D.L.: "Bacterial mortality : A pathway for the formation of refractory DOM?"Bell, C.R., Brylinsky, M, and Johnson-Green, P.(eds.)"Microbial Biosystems : New Frontiers-Proceedings of the 8th International Symposium on Microbial Ecology". (in print). (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata, T.: ""Picopellets" produced by phagotrophic nanoflagellates : Role in the material cycling within marine environments."Handa, N., Tanoue, E.and Hama, T.(eds.)"Dynamics and Characterization of Marine Organic Matter". 241-256 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Nagata,T.,Fukuda,H.,Fukuda,R.and Koike,I.: "Bacterioplankton distribution and production in deep Pacific waters : Large-scale geographicvariations and possible coupling with sinking particle fluxes."Limnology and Oceanography. 45. 426-435 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Fukuda,R.,Sohrin,Y.,Saotome,N.,Fukuda,H.,Nagata,T.and Koike,I.: "East-west gradient in ectoenzyme activities in the subarctic Pacific : Possible regulation by zinc."Limnology and Oceanography. 45. 930-939 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nagata,T.: "Production mechanisms of dissolved organic matter."Kirchman,D.L.(ed.)"Microbial Ecology of the Oceans". 121-152 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nagata,T.and Kirchman,D.L.: "Bacterial mortality : A pathway for the formation of refractory DOM?"Bell,C.R.,Brylinsky,M,and Johnson-Green,P.(eds.)"Microbial Biosystems : New Frontiers -Proceedings of the 8th International Symposium on Microbial Ecology". in print. (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nagata,T.: ""Picopellets" produced by phagotrophic nanoflagellates : Role in the material cycling within marine environments."Handa,N.,Tanoue,E.and Hama,T.(eds.) "Dynamics and Characterization of Marine Organic Matter". 241-256 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nagata,Toshi(共著): "Microbial Ecology of the Oceans"John Wiley & Sons (印刷中). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Nagata,Toshi(共著): "New Frontiers in Microbial Ecology"Atlantic Canada Society of Microbial Ecology (印刷中).

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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