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DNA Replication Apparatus and S-Phase Checkpoint Control

Research Project

Project/Area Number 11694277
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionOsaka University

Principal Investigator

SUGINO Akio  Research Institute for Microbial Diseases, Osaka University, Professor, 微生物病研究所, 教授 (90231737)

Co-Investigator(Kenkyū-buntansha) HIRAGA Shin-ichiro  Research Institute for Microbial Diseases, Osaka University, Assistant Professor, 微生物病研究所, 助手 (90322172)
Project Period (FY) 1999 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥19,110,000 (Direct Cost: ¥17,400,000、Indirect Cost: ¥1,710,000)
Fiscal Year 2001: ¥7,410,000 (Direct Cost: ¥5,700,000、Indirect Cost: ¥1,710,000)
Fiscal Year 2000: ¥5,600,000 (Direct Cost: ¥5,600,000)
Fiscal Year 1999: ¥6,100,000 (Direct Cost: ¥6,100,000)
KeywordsChromosomal DNA replication / Mcm2-7 protein complex / Mcm10 protein / S-phase checkpoint / Rad53p / Cdc7 / Dbf4 protein kinase complex / Protein kinase / Xenopus egg in vitro replication system / MCM10蛋白 / Cdc7p / Dbf4p複合体 / in vitro 複製系 / Xenopus egg / DNAポリメラーゼ / Sー期チェックポイント
Research Abstract

Saccharomyces cerevisiae Cdc7/Dbf4 protein kinase, which regulates the initiation of chromosomal DNA replication, was expressed and purified from insect cells. It was found that the purified Cdc:7/Dbf4 phosphorylates Mcm2, which is one of Mcm2-7 complex. Furthermore, its phosphorylation sites were determined. Xenopus homologs of S. cerevisiae Cdc7/Dbf4 protein Kinase and Mcm10 were identified and their corresponding genes were cloned. it was found that Xenopus Cdc7/Dbf4.protein kinase and Mcm10 are required for the initiation of chromosomal DNA replication as in S. cerevisiae.
S. cerevisiae Rad53p, which involved in both DNA-damage-and S-phase checkpoint regulation, was purified and one of the substrates was identified to be Dbf4/Cdc7 protein kinase. It was found that Rad53p directly intercts with Cdc7/Dbf4 and phosphorylates Dbf4. Phosphorylation of Cdc7/Dbf4 complex with Rad53p inactivates Cdc7/Dbf4 protein kinase activity.

Report

(4 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • Research Products

    (60 results)

All Other

All Publications (60 results)

  • [Publications] Kamimura, Y.: "DNA helicase III of Saccharomyces cerevisiae, encoded by YER176w (HEL1), highly unwinds covalently closed, circular DNA in the presence of a DNA topoisomerase and yRF-A"J. Biochem.. 125. 236-244 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Johnston, L.H.: "First the CDKs, now the DDKs"Trends Cell Biol.. 9. 249-252 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Johnston, L.H.: "A Cdc7p-Dbf4p protein kinase activity is conserved from yeast to humans"Prog. Cell Cycle Res.. 4. 61-69 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Masumoto, H.: "Dpb11 controls the association between DNA polymerase α and ε, and the autonomously replicating sequence region of budding yeast"Mol. Cell. Biol.. 20. 2809-2817 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Izumi, M.: "Transcription of the catalytic 180-kDa subunit gene of mouse DNA polymerase α is controlled by E2F, an Ets-related transcription factor, and Sp1"Biochim. Biophys. Acta. 1492. 341-352 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ohya, T.: "Structure and function on the fourth subunit (Dpb4p) of Saccharomyces cerevisiae DNA polymerase II(ε)"Nucleic Acids Res.. 28. 3846-3852 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] kihara, M.: "Characterization of the yeast Cdc7p/Dbf4p complex purified from, insect cells : Its protein kinase activity is regulated by Rad53p"J. Biol. Chem.. 275. 35051-35062 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kawasaki, Y.: "Interactions between Mcm10p and other replication factors are required for proper initiation and elongation of chromosomal DNA replication in Saccharomyces cerevisiae"Genes Cells. 5. 975-989 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Waga, S.: "DNA Polymerase ε is required for co-ordinated, rapid and efficient chromosomal DNA replication in Xenopus egg extracts"Proc. Natl. Acad. Sci., USA. 98. 4978-4983 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kamimura, Y.: "Sld3, which interacts with Cdc45(Sld4), functions for chromosomal DNA replication in Saccharomyces cerevisiae"EMBO J.. 20. 2097-2107 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Burgers, P.M.J.: "Eukaryotic DNA Polymerases : Proposal for a Revise Nomenclature"J. Biol. Chem.. 276. 43487-43490 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kawasaki, Y.: "Yeast Replicative DNA Polymerases and Their Role at the Replication Fork"Mol.Cells. 12. 277-285 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shimizu, K.: "The fifth essential DNA polymerase φ in Saccharomyces cereuisiae is localized to the nucleolus and plays an important role in synthesis of ribosomal RNA"Nature. (in press). (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ohya, T.: "The DNA polymerase activity of Polε is required for rapid, efficient and highly accurate chromosomal DNA replication, telomere length maintenance, and normal cell senescence in Saccharomyces cerevisiae"J. Biol. Chem.. (in press). (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Johnston, L.H.: "Progress in Cell Cycle Research, Vol.4"(eds. L. Meijer, A. Jezequel, and B. Ducommun, Prenum Press, New York). 8 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 杉野 明雄: "実験医学(Experimenntal Medicine)18(19)"羊土社. 7 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kamimura, Y.: "DNA helicase III of Saccharomyces cerevisiae, encoded by YER176w (HEL1), highly unwinds covalently closed, circular DNA in the presence of a DNA topoisomerase and yRF-A"J. Biochem. 125. 236-244 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Johnston, L. H.: "First the CDKs, now the DDKs"Trends Cell Biol.. 9. 249-252 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Johnston, L. H.: "A Cdc7p-Dbf4p protein Kinase activity is conserved from yeast to humans"Prog. Cell. Cycle Res.. 4. 61-69 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Masumoto, H.: "Dpb11 controls the association between DNA Polymerase α and ε, and the autonomously replicating sequence region of budding yeast"Mol. Cell. Biol.. 20(8). 2809-2817 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Izumi, M.: "Transcription of the catalytic 180-kDa subunit gene of mouse DNA polymerase αis controlled by E2F, an Ets-related transcription factor, and Sp1"Biochim. Biophys. Acta. 1492. 341-352 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ohya, T.: "Structure and function of the fourth subunit (Dpb4p) of Saccharomyces cerevisiae DNA polymerase II (ε)"Nucleic Acids Res.. 28(20). 3846-3852 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kihara, M.: "Characterization of the yeast Cdc7p/Dbf4p complex purified from insect cells : Its protein kinase activity is regulated by Rad53p"J. Biol. Chem.. 275(45). 35051-35062 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kawasaki, Y.: "Interactions between Mcm10p and other replication factors are required for proper initiation and elongation of chromosomal DNA replication in Saccharomyces cerevisiae"Genes Cells. 5. 975-989 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Waga, S.: "DNA Polymerase ε is required for co-ordinated, rapid and efficient chromosomal DNA replication in Xenopus egg extracts"Proc. Natl. Acad. Sci. USA. 98(9). 4978-4983 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kamimura, Y.: "Sld3, which interacts with Cdc45 (Sld4), functions for chromosomal DNA replication in Saccharomyces cerevisiae"EMBO J.. 20(8). 2097-2107 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Burgers, P. M. J.: "Eukaryotic DNA Polymerases : Proposal for a Revise Nomenclature"J. Biol. Chem.. 276(47). 43487-43490 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kawasaki, Y.: "Yeast Replicative DNA Polymerases and Their Role at the Replication Fork"Mol. Cells. 12(3). 277-285 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shimizu, K: "The fifth essential DNA polymerase Φ in Saccharomyces cerevisiae is localized to the nucleolus and plays an important role in synthesis of ribosomal RNA"Nature. (in press). (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ohya, T.: "The DNA polymerase activity of Polε is required for rapid, efficient and highly accurate chromosomal DNA replication, telomere length maintenance, and normal cell senescence in Saccharomyces cerevisiae"J. Biol. Chem.. (in press). (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Waga, S.: "DNA polymerase ε is required for co-ordinaed, rapid and efficient chromosomal DNA replication in Xenopus egg extracts"Proc.Natl.Acad.Sci., USA. 98(9). 4978-4983 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kamimura, Y.: "Sld3, which interacts with Cdc45(Sld4),functions for chromosomal DNA replication in Saccharomyces cerevisiae"EMBOJ.. 20(8). 2097-2107 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Burgers, P.M.J: "Eukaryotic DNA Polymerases: Proposal for a Revise Nomenclature"J.Biological Chemistry. 276(47). 43487-43490 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kawasaki, Y.: "Yeast Replicative DNA Polymerses and Their Role at the Replication Fork."Mol.Cells. 12(3). 277-285 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Shimizu, K.: "The fifth essential DNA polymerase φ in Saccharomyces cerevisiae is localized to the nucleolus and plays an important role in synthesis of ribosomal RNA."Nature. (印刷中). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Ohya, T.: "The DNA polymerase activity of Pol ε is required for rapid, efficient and highly accurate chromosomal DNA replication, telomere length maintenance, and normal cell senescence in Saccharomyces cerevisiae"J.Bio1ogical Chemistry. (印刷中). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Johnston,L.H.: "A Cdc7p-Dbf4p protein kinase activity is conserved from yeast to humans."Prog.Cell Cycle Res.. 4. 61-69 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Masumoto,H.: "Dpb11 controls the association between DNA polymerase α and ε, and the ARS region of budding yeast."Mol.Cell.Biol.. 20. 2809-2817 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kihara,M.: "Characterization of the yeast Cdc7p/Dbf4p complex purified from insect cells : its protein kinase activity is regulated by Rad53p."J.Biol.Chem.. 275. 35051-35062 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Ohya,T.: "Structure and function of the fourth subunit (Dpb4p) of DNA polymerase εin Saccharomyces cerevisiae."Nucleic Acids Res.. 28. 3846-3852 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Izumi,M.: "Transcription of the catalytic 180-kDa subunit gene of mouse DNA polymerase α is controlled by E2F, an Ets-related transcription factor, and Spl."Biochim.Biophys.Acta.. 1492. 341-352 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kawasaki,Y.: "Interactions between Mcm10p and other replication factores are required for proper initiation and elongation of chromosomal DNA replication in Saccharomyces cerevisiae."Genes Cells. 5. 975-990 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Waga,S.: "DNA polymerase ε is required for co-ordinated, rapid and efficient chromosomal DNA replication in Xenopus egg extracts."Proc.Natl.Acad.Sci.,USA. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kamimura,Y.: "DNA helicase III of Saccharomyces cerevisiae, encoded by YER176w(HEL1), highly unwinds covalently closed, circular DNA in the presence of a DNA topoisomerase and yRF-A"Journal of Biochemistry. 125. 236-244 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Johnston,L.H.: "First the CDKs, now the DDKs"Tends in Cell Biology. 9. 249-252 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Masumoto,H.: "Dpb11 controls the association between DNA polymerase α and ε, and the ARS region of budding yeast"Molecular and Cellular Biology. in press. (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kihara,M.: "The Cdc7p/Dbf4p ARS-binding and portein kinase activities are both required for entry to S phase and are regulated by Rad53p in Saccharomyces cerevisiae"Molecular Cell. in press. (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Gary R.: "A novel role in DNA metabolism for the binding of Fenl/Red27 to PCNA and implications for genetic risk"Mol Cell Biol. 19. 5373-5382 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Tran H.T.: "Genetic factors affecting the impact of DNA polymerase delta proofreading activity on mutation avoidance in yeast"Genetics. 152. 47-59 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Tran H.T.: "The 3'-->5' exonucleases of DNA polymerases delta and epsilon and the 5'-->3' exonuclease Exo1 have major roles in postreplication mutation avoidance in Saccharomyces cerevisiae"Mol Cell Biol.. 19. 2000-2007 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kroutil L.C.: "Deletion errors generated during replication of CAG repeats"Nucleic Acids Res.. 27. 3481-3486 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Labib K.: "G1-phase and B-type cyclins exclude the DNA-replication factor Mcm4 from the nucleus"Nat. Cell Biol.. 1. 415-422 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Santocanale C.: "Activation of dormant origins of DNA replication in budding yeast"Genes Dev.. 13. 2360-2364 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Noton E.: "CDK inactivation is the only essential function of the APC/C and the mitotic exit network proteins for origin resetting during mitosis"Mol.Cell.. 5. 85-95 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Ferreira M.F.: "Dbf4p, an essential S phase-promoting factor, is targeted for degradation by the anaphase-promoting complex"Mol Cell Biol.. 20. 242-248 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Neecke H.: "Cell cycle progression in the presence of irreparable DNA damage is controlled by a Mec1-and Rad53-dependent checkpoint in budding yeast"EMBO J.. 18. 4485-4497 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Weinreich M.: "Cdc7p-Dbf4p kinase binds to chromatin during S phase and is regulated by both the APC and the RAD53 checkpoint pathway"EMBO J.. 18. 5334-5346 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Weinreich M.: "The Cdc6p nucleotide-binding motif is required for loading mcm proteins onto chromatin"Proc.Natl.Acad.Sci.USA. 96. 441-446 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Chong J.P.: "A double-hexamer archaeal minichromosome maintenance protein is an ATP-dependent DNA helicase"Proc.Natl.Acad.Sci.USA. 97. 1530-1535 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Johnston,L.H.: "Progress in Cell Cycle Reseach (Meijier,L.,Jezequel,A.,and Ducommun,B.,eds.) Plenum Press,New York,USA Vol.4"A Cdc7-Dbf4 kinase activity is conserved from yeast to human. 8 (199)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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