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Variation in chloroplast microsatellite loci among wild and cultivated species of Emmer wheat

Research Project

Project/Area Number 11833011
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research InstitutionKOBE UNIVERSITY

Principal Investigator

MORI Naoki  Kobe University, Faculty of Agriculture, Associate Professor, 農学部, 助教授 (60230075)

Co-Investigator(Kenkyū-buntansha) NAKAMURA Chiharu  Kobe University, Faculty of Agriculture, Professor, 農学部, 教授 (10144601)
TAKUMI Shigeo  Kobe University, Faculty of Agriculture, Assitant Professor, 農学部, 助手 (50249166)
Project Period (FY) 1999 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥3,100,000 (Direct Cost: ¥3,100,000)
Fiscal Year 2000: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 1999: ¥1,600,000 (Direct Cost: ¥1,600,000)
KeywordsDNA fingerprinting / microsatellite / SSR (simple sequence repeat) / domestication / Aegilops / genetic diversity / wheat / genetic resources / SSR(simple sequence repeat) / AFLP / 起源 / 進化
Research Abstract

It is generally accepted that cultivated Emmer wheat (Triticum dicoccum Schubl.) originated from its wild ancestor (T.dicoccoides Korn.) by domestication about eight thousand years ago, somewhere in the Fertile Crescent. To study the origin of the cultivated Emmer wheat, allelic diversity in eight microsatellite loci of the chloroplast genome was investigated using 100 accessions of T.dicoccum and 72 accessions of T.dicoccoides. Five accessions of=T.paleocolchicum Men., two of T.durum L.and one each of T.aestivum L., T.carthlicum Nevski, T.ispahanicum Heslot, T.polonicum L.and T.turgidum L.were analyzed as references. The number of repeats in each locus was determined using PCR followed by PAGE.Polymorphic band patterns were obtained at seven out of the eight loci. As for the polymorphic microsatellites, the number of alleles per locus ranged from two to five with an average of 2.92. Nei's allelic diversity was estimated for each locus within each species. The average allelic diversity of T.dicoccoides (0.349) was about 3.2 times larger than that of T.dicoccum (0.109). One plastotype representing 80 % of the T.dicoccum accession and all accessions of references was identical to that of T.aestivum cv Chinese Spring. Whereas this major plastotype of the cultivated wheat was identified only in six T.dicoccoides accessions collected in one region in the north western Fertile Crescent. In addition to this major maternal lineage, we have identified a minor lineage from the wild Emmer to the cultivated Emmer wheat. These results suggest that there are at least two maternal lineages in cultivated Emmer wheat, and that the domestication of Emmer wheat with the major plastotype occurred in the north western Fertile Crescent.

Report

(3 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • Research Products

    (6 results)

All Other

All Publications (6 results)

  • [Publications] Ishii,T.: "Evaluation of allelic diversity at chloroplast microsatellite loci among common wheat and its ancestral species."Theoretical and Applied Genetics. Vol.102. (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 石堂貴夫: "第一同素群染色体のRFLPからみたコムギ倍数種の遺伝的分化"近畿作物・育種研究. Vol.44. 61-62 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ishii, T.et al.: "Evaluation of allelic diversity at chloroplast microsatellite loci among common wheat and its ancestral species."Theoretical and Applied Genetics. Vol.102 (in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ishido, T.et al.: "Wheat genome differentiationas revealed by polymorphisms in the homoeologous group 1 chromosomes (in Japanese)"Kinki Journal of Crop Science and Breeding. Vol.44. 61-62 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ishii,T.: "Evaluation of allelic diversity at chloroplast microsatellite loci among common wheat and its ancestral species."Theoretical and Applied Genetics. Vol.102(In press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 石堂貴夫: "第1同祖群染色体のRFLPからみたコムギ倍数種の遺伝的分化"近畿作物・育種研究. Vol.44. 61-62 (1999)

    • Related Report
      2000 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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