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Studies on Molecular Mechanisms of Translesion Synthesis and Carcinogenesis

Research Project

Project/Area Number 12213070
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionOsaka University

Principal Investigator

HANAOKA Fumio  Osaka Univ., Grad. Sch. Front. Biosci., Professor, 大学院生命機能研究科, 教授 (50012670)

Co-Investigator(Kenkyū-buntansha) MASUTANI Chikahide  Grad. Sch. Front. Biosci., Associate Professor, 大学院生命機能研究科, 助教授 (40241252)
YOKOI Masayuki  Grad. Sch. Front. Bbsci., Research Associate, 大学院生命機能研究科, 助手 (00322701)
OHKUMA Yoshiaki  Toyama Med. Pharm. Univ., Fac. Pharm. Sci., Professor, 薬学部, 教授 (70192515)
Project Period (FY) 2000 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥67,600,000 (Direct Cost: ¥67,600,000)
Fiscal Year 2004: ¥12,600,000 (Direct Cost: ¥12,600,000)
Fiscal Year 2003: ¥12,600,000 (Direct Cost: ¥12,600,000)
Fiscal Year 2002: ¥13,100,000 (Direct Cost: ¥13,100,000)
Fiscal Year 2001: ¥11,300,000 (Direct Cost: ¥11,300,000)
Fiscal Year 2000: ¥18,000,000 (Direct Cost: ¥18,000,000)
KeywordsXP variant / translesion synthesis / DNA polymerase / DNA lesions / knockout mice / carcinogenesis / 遺伝子ノックアウト / REV1 / DNAポリメラーゼ / DNA修復 / 色素性乾皮症 / polイータ / DNA複製 / 活性酸素 / XPVポリメラーゼ / 紫外線
Research Abstract

In order to understand the molecular mechanisms of translesion synthesis and the relationships between carcinogenesis and translesion synthesis, we studied various aspects of translesion synthesis with special reference on human DNA polymerase η (Pol η) and obtained following results.
1. Human Pol η copies undamaged DNA with much lower fidelity than any other template-dependent DNA polymerase studied. On the other hand, human Pol η catalyzes efficient and accurate translesion synthesis past cic-syn cyclobutane di-thymine lesions, AAF-modified guanine, and a cisplatin-induced intrastrand cross-link between two guanines.
2. Human Pol η gene consists of 11 exons covering the entire coding region of the transcription-initiation, and the genomic DNA analysis suggested that three of four XP-V cell lines have homozygous mutations, and one of them have heterozygous point mutations, one of which is a splice mutation of the major allele.
3. Human Pol η binds template/primer DNAs regardless of TT dimers. Rather, enhanced binding to template/primer DNAs containing TT dimers is only observed when the 3-end of the primer is an adenosine residue situated opposite the lesion. When two nucleotides have been incorporated into the primer beyond the TT dimer position, the Pol η-template/primer DNA complex is destabilized.
4. In order to make a good in vivo model to study the high incidence of skin carcinogenesis in XP-V patients, we disrupted the mouse Pol η gene in ES cells by replacing exon 8 with the neo^r gene. Mice that are homozygous for the null mutation are viable, fertile and did not show any obvious defects during their first year of life. Pol η-deficient fibroblasts derived from the mutant mice have reduced capacity to replicate UV-damaged DNA. Pol η-deficient mice developed skin tumors after UVB-irradiation, while wild-type and heterozygous littermates did not.

Report

(6 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (42 results)

All 2005 2004 2002 2000 Other

All Journal Article (18 results) Publications (24 results)

  • [Journal Article] Different mutation signatures in DNA polymerase η- and MSH6-deficient mice suggest separate roles in antibody diversification2005

    • Author(s)
      Martomo, S.A.et al.
    • Journal Title

      Proc.Natl.Acad.Sci.USA (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] UV-induced ubiquitylation of XPC protein mediated by UV-DDB-ubiquitin ligase complex.2005

    • Author(s)
      Sugasawa, K., et al.
    • Journal Title

      Cell (in press)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Nucleosomal structure of undamaged DNA regions suppresses the non-specific DNA binding of the XPC complex.2005

    • Author(s)
      Yasuda, T., et al.
    • Journal Title

      DNA Repair 4

      Pages: 389-395

    • Related Report
      2004 Annual Research Report
  • [Journal Article] DNA binding properties of human DNA polymerase η : implications for fidelity and polymerase switching of translesion synthesis2004

    • Author(s)
      Kusumoto, R.et al.
    • Journal Title

      Genes Cells 9

      Pages: 1139-1150

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Preferential cis-syn thymine dimer bypass by DNA polymerase η occurs with biased fidelity2004

    • Author(s)
      McCulloch, S.D.et al.
    • Journal Title

      Nature 428

      Pages: 97-100

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] DNA binding properties of human DNA polymerase implications for fidelity and polymerase switching of translesion synthesis.2004

    • Author(s)
      Kusumoto, R., Masutani, C., Shimmyo, S., lwai, S., Hanaoka, F.
    • Journal Title

      Genes Cells 9

      Pages: 1139-1150

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Preferential cis-syn thymine dimer bypass by DNA polymerase η occurs with biased fidelity.2004

    • Author(s)
      McCulloch, S.D., Kokoska, R.J., Masutani, C., lwai, S., Hanaoka, F., Kunkel, T.A.
    • Journal Title

      Nature 428

      Pages: 97-100

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] DNA binding properties of human DNA polymerase η : Implication for polymerase switching.2004

    • Author(s)
      Kusumoto, R., et al.
    • Journal Title

      Genes to Cells 9

      Pages: 1139-1150

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Interaction of hREV1 with three human Y-family DNA polymerases.2004

    • Author(s)
      Ohashi, E., et al.
    • Journal Title

      Genes to Cells 9

      Pages: 523-531

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Translesion synthesis past estrogen-derived DNA adducts by human DNA polymerases η and κ.2004

    • Author(s)
      Suzuki, N., et al.
    • Journal Title

      Biochemistry 43

      Pages: 6304-63114

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Palm residue mutants in DNA polymerases a and h alter DNA replication fidelity and translesion activity.2004

    • Author(s)
      Niimi, A., et al.
    • Journal Title

      Molecular and Cellular Biology 24

      Pages: 2734-2746

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Translesion synthesis by human DNA polymerase η across thymine glycol lesions2002

    • Author(s)
      Kusumoto, R.et al.
    • Journal Title

      Biochemistry 41

      Pages: 6090-6099

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Translesion synthesis by human DNA polymerase η across thymine glycol lesions.2002

    • Author(s)
      Kusumoto, R., Masutani, C., lwai, S., Hanaoka, F.
    • Journal Title

      Biochemistry 41

      Pages: 6090-6099

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Mechanisms of accurate translesion synthesis by human DNA polymerase η2000

    • Author(s)
      Masutani, C.et al.
    • Journal Title

      EMBO J. 19

      Pages: 3100-3109

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Low fidelity DNA synthesis by human DNA polymerase η2000

    • Author(s)
      Matsuda, T.et al.
    • Journal Title

      Nature 404

      Pages: 1011-1013

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Mechanisms of accurate translesion synthesis by human DNA polymerase-η.2000

    • Author(s)
      Masutani, C., Kusumoto, R., lwai, S., Hanaoka, F.
    • Journal Title

      EMBO J. 19

      Pages: 3100-3109

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Low fidelity DNA synthesis by human DNA polymerase η.2000

    • Author(s)
      Matsuda, T., Bebenek, K., Masutani, C., Hanaoka, F., Kunkel, T.A.
    • Journal Title

      Nature 404

      Pages: 1011-1013

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Different mutation signatures in DNA polymerase η-and MSH6-deficient mice suggest separate roles in antibody diversification.

    • Author(s)
      Martomo, S.A., Yang, W.W., Wersto, R.P., Ohkumo, T., Kondo, Y., Yokoi, M., Masutani, C., Hanaoka, F., Gearhart, P.J.
    • Journal Title

      Proc.Natl.Acad.Sci.USA (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Yang, I.Y.et al.: "Mammalian translesion DNA synthesis across an acrolen-derived deoxyguanosine adduct."J.Biol.Chem.. 278. 13989-13994 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] McDonald, J.P. et al.: "129-derived strains of mice are deficient in DNA polymerase ι and have normal immunoglobulin hypermutation."J.Exp.Med.. 198. 635-643 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Vaisman, A. et al.: "Sequence-context-dependent replication of DNA templates containing UV-induced lesions by human DNA polymerase ι."DNA Repair. 2. 991-1006 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Jaloszynski, P. et al.: "8-Hydroxyguanine in a mutational hotspot of the c-Ha-ras gene causes misreplication, 'action-at-a-distance' mutagenesis"Nucleic Acids Res.. 31. 6085-6095 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Bassett E. et al.: "Efficiency of extension of mismatched primer termini across from cisplatin and oxaliplatin by human DNA polymerases β and η"Biochemistry. 42. 14197-14206 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] McCulloch S.D. et al.: "Preferential cis-syn thymine dimer bypass by DNA polymerase η occurs with biased fidelity."Nature. 428. 97-100 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Chiapperino, D.et al.: "Preferential misincorporation of Purine nucleotides by human DNA polymerase η opposite-benzo[a]pyrene 7,8-diol 9,10 epoxide deoxyguanosine"J.Biol.Chem.. 277. 11765-11771 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kusumoto, R.et al.: "Translesion synthesis by human DNA polymerase η across thymine glycol lesions"Biochemistry. 41. 6090-6099 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Pavlov, Y.I.et al.: "Correlation of somatic hypermutation specificity and A-T base pair substitution errors by DNA polymerase eta during copying of a mouse immunoglobulin kappa light chain transgene"Proc.Natl.Acad.Sci.USA. 99. 9954-9959 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yamada, A.et al.: "Detection of reduced RNAsynthesis in UV-irradiated Cockayne syndrome B cells using an isolated nuclear system"Biochim.Biophys.Acta. 1592. 129-134 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Servanit, L.et al.: "A role for DNA polymerase β in mutagenic UV lesions bypass"J.Biol.Chem.. 277. 50046-50053 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Shimizu, M.et al.: "Erroneous incorporation of oxidized DNA precursors by Y-family DNA polymerases"EMBO Rep.. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ishikawa, T. et al.: "Mutagenic and non-mutagenic bypass of DNA lesions by Drosophila DNA polymerases dpol η and dpol c"J.Biol.Chem.. 276. 15155-15163 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Levine, R.L. et al.: "Translesion DNA synthesis catalyzed by human pol η and pol k across 1,N6-athenodeoxyadenosine"J.Biol.Chem.. 276. 18717-18721 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Matsuda, T. et al.: "Error rate and specificity of human and murine DNA polymerase η"J.Mol.Biol.. 312. 335-346 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Boudsocq, F. et al.: "Sulfolobus solfataricus p2 DNA polymerase TV (Dpo4) : an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to aukaryotic pol η"Nucleic Acids Res.. 29. 4607-4616 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kuraoka, I. et al.: "Oxygen frae-radical damage to DNA : translesion synthesis by DNA polymerase η and resistance to exonuclease action at cyclopurine deoxynucleaside residues"J.Biol.Chem.. 276. 49283-49288 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Brougton, B.C. et al.: "Molecular analysis of mutations in DNA polymerase η in xevodarma pigmantosum-variant patients"Proc.Natl.Acad.Sci.USA. 99. 815-820 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Matsuda,T.: "Low fidelity DNA synthesis by human DNA polymeraseη"Nature. 404. 1011-1013 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Masutani,C.: "Mechanisms of accurate translesion synthesis by human DNA polymeraseη"EMBO J. 19. 3100-3109 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yamada,A.: "Complementation of defective translesion synthesis and ultraviolet light sensitivity in xeroderma pigmentosum variant cells by human and mouse DNA polymerase η"Nucl.Acids Res.. 28. 2473-2480 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yuasa,M.: "Genomic structure, chromosomal localization and identification of mutations in the xeroderma pigmentosum variant gene"Oncogene. 19. 4721-4728 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Tissier,A.: "Misinsertion and bypass of thymine-thymine dimers by human DNA polymerase L."EMBO J. 19. 5259-5266 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kannouche,P.: "Domain structure, localisation, and function of DNA polymerase η, defective in xeroderma pigmentosum variant cells"Genes Dev.. 15. 158-172 (2001)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2018-03-28  

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