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DEVELOPMENT OF CANCER THERAPEUTICS BASED ON REGULATION OF CHROMATIN STRUCTURE AND FUNCTION

Research Project

Project/Area Number 12219205
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionRIKEN (2002-2004)
The University of Tokyo (2000-2001)

Principal Investigator

YOSHIDA Minoru  RIKEN, Discovery Research Institute, Chemical Genetics Laboratory, CHIEF SCIENTIST, 中央研究所 吉田化学遺伝学研究室, 主任研究員 (80191617)

Co-Investigator(Kenkyū-buntansha) 堀之内 末治  東京大学, 大学院・農学生命科学研究科, 教授 (80143410)
Project Period (FY) 2000 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥129,700,000 (Direct Cost: ¥129,700,000)
Fiscal Year 2004: ¥25,000,000 (Direct Cost: ¥25,000,000)
Fiscal Year 2003: ¥29,000,000 (Direct Cost: ¥29,000,000)
Fiscal Year 2002: ¥25,500,000 (Direct Cost: ¥25,500,000)
Fiscal Year 2001: ¥26,200,000 (Direct Cost: ¥26,200,000)
Fiscal Year 2000: ¥24,000,000 (Direct Cost: ¥24,000,000)
KeywordsACETYLATION / HDAC / MICROTUBULE / CYCLIC TETRAPEPTIDES / DRUG DESIGN / THIOL / FK228 / SCOP / プロドラッグ / エンドサイトーシス / トラポキシン / ヒストンデアセチラーゼ / 酸化還元 / トリコスタチン / チューブリン / ヒストン / グルタチオン / 細胞周期 / ラディシコール / ヒストンアセチル化 / 転写制御 / クロマチン
Research Abstract

We have identified histone deacetylases (HDAC) as the molecular target of trichostatin A (TSA) and trapoxin (TPX), microbial metabolites that inhibit mammalian cell cycle. Recently, we have shown that FK228, a potent anti-cancer agent under the phase II clinical trials in the US, also specifically inhibits HDAC. Since accumulating evidence suggests that HDAC is a novel molecular target for anti-cancer drugs, we developed new types of HDAC inhibitors in this project The X-ray crystallographic studies suggested that TSA inhibits HDAC by chelating the active-site zinc with its hydroxamic acid group, while TPX covalently modifies an active site residue via its epoxiketone moiety. We synthesized a hybrid inhibitor by coupling the cyclic tetrapeptide of TPX with the hydroxamic acid of TSA, named CHAP CHAP was shown to be a potent HDAC inhibitor. In contrast to TSA or TPX, CHAP was highly stable in serum and a derivative (CHAP31) showed potent antitumor activity in the xenograft models. FK228 has an intramolecular disulfide. We showed that FK228 is a natural prodrug, which can be converted to the reduced form with a thiol group interacting with the active-site zinc by cellular reducing activity. We therefore designed a new type of inhibitors by introducing the thiol group into the TPX-like cyclic tetrapeptide inhibitors named SCOP. SCOP was normally oxidized and inactivated but became active when it is reduced in cells. The HDAC family includes more than ten species of enzymes. TSA inhibited almost all the enzymes but TPX failed to inhibit HDAC6. By using the differential sensitivity, we identified that HDAC6 is the tubulin deacetylase. Since each member of HDAC family may have each distinct function, it is important to develop subtype-specific inhibitors. During the course of screening forth subtype-specific inhibitors, we found a SCOP derivative that specifically inhibits HDAC4.

Report

(6 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (47 results)

All 2004 2003 2002 2001 Other

All Journal Article (19 results) Book (1 results) Patent(Industrial Property Rights) (2 results) Publications (25 results)

  • [Journal Article] Repression of PML nuclear body-associated transcription by oxidative stress-activated Bach2.2004

    • Author(s)
      Tashiro, S. et al.
    • Journal Title

      Mol.Cell.Biol. 24

      Pages: 3473-3484

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Toward an HDAC6 inhibitor : synthesis and conformational analysis of cyclic hexapeptide hydroxamic acid designed from α-tubulin sequence.2004

    • Author(s)
      Jose, B. et al.
    • Journal Title

      Bioorg.Med.Chem. 12

      Pages: 1351-1356

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Synthesis and histone deacetylase inhibitory activity of cyclic tetrapeptides containing a retrohydroxamate as zinc ligand.2004

    • Author(s)
      Nishino, N. et al.
    • Journal Title

      Bioorg.Med.Chem.Lett. 14

      Pages: 2427-2431

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Chlamydocin-hydroxamic acid analogues as histone deacetylase inhibitors.2004

    • Author(s)
      Nishino, N. et al.
    • Journal Title

      Bioorg.Med.Chem. 12

      Pages: 5777-5784

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Subtype selective substrates for histone deacetylases.2004

    • Author(s)
      Heltweg, B. et al.
    • Journal Title

      J.Med.Chem. 47

      Pages: 5235-5243

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Cytoplasmic ubiquitin ligase KPC regulates proteolysis of p27(Kip1) at G1 phase.2004

    • Author(s)
      Kamura, T. et al.
    • Journal Title

      Nature Cell Biol. 6

      Pages: 1229-1235

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Cyclic tetrapeptides bearing sulfhydoryl group potently inhibit histone deacetylases2003

    • Author(s)
      Nishino, N., et al.
    • Journal Title

      Org. Lett. 5

      Pages: 5079-5082

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Cyclic tetrapeptides bearing sulfhydoryl group potently inhibit histone deacetylases.2003

    • Author(s)
      Nishino, N., et al.
    • Journal Title

      Org. Lett. 5

      Pages: 5079-82

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Protein deacetylases : enzymes with functional diversity as novel therapeutic targets.2003

    • Author(s)
      Yoshida, M., et al.
    • Journal Title

      Progress Cell Cycle Research 5 In Cell cycle regulators as therapeutic targets pp.

      Pages: 269-278

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] In vivo destabilization of dynamic microtutules by HDAC6-mediated deacetylation2002

    • Author(s)
      Matsuyama, A. et al.
    • Journal Title

      EMBO J. 21

      Pages: 6820-6831

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] HDAC6 is a microtubule-associated deacetylase2002

    • Author(s)
      Hubbert, C. et al.
    • Journal Title

      Nature 417

      Pages: 455-458

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] FK228 (depsipeptide) as a natural prodrug that inhibits class I histone deacetylases2002

    • Author(s)
      Furumai, R. et al.
    • Journal Title

      Cancer Res. 62

      Pages: 4916-4921

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] In vivo destabilization of dynamic microtubules by HDAC6-mediated deacetylation.2002

    • Author(s)
      Matsuyama, A., et al.
    • Journal Title

      EMBO J. 21

      Pages: 6820-31

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] HDAC6 is a microtubule-associated deacetylase.2002

    • Author(s)
      Hubbert, C., et al.
    • Journal Title

      Nature 417

      Pages: 455-8

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] FK228 (depsipeptide) as a natural prodrug that inhibits class I histone deacetylases.2002

    • Author(s)
      Furumai, R., et al.
    • Journal Title

      Cancer Res. 62

      Pages: 4916-21

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Potent histone deacetylase inhibitors built from trichostatin A and cyclic tetrapeptide antibiotics including trapoxin2001

    • Author(s)
      Furumai, R. et al.
    • Journal Title

      Proc. Natl. Acad. Sci. USA. 98

      Pages: 87-92

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Cyclic Hydroxamic-acid-containing Peptide 31, a potent synthetic histone deacetylase inhibitor with antitumor activity2001

    • Author(s)
      Komatsu, Y. et al.
    • Journal Title

      Cancer Res. 61

      Pages: 4459-4466

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Potent histone deacetylase inhibitors built from trichostatin A and cyclic tetrapeptide antibiotics including trapoxin.2001

    • Author(s)
      Furumai, R., et al.
    • Journal Title

      Proc. Natl. Acad. Sci. USA 98

      Pages: 87-92

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Cyclic Hydroxamic-acid-containing Peptide 31, a potent synthetic histone deacetylase inhibitor with antitumor activity.2001

    • Author(s)
      Komatsu, Y., et al.
    • Journal Title

      Cancer Res. 61

      Pages: 4459-66

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] Progress Cell Cycle Research 52003

    • Author(s)
      Yoshida, M., et al.
    • Total Pages
      547
    • Publisher
      Protein deacetylases : enzymes with functional diversity as novel therapeutic targets
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Patent(Industrial Property Rights)] ヒストン脱アセチル化酵素阻害剤およびその製造方法2003

    • Inventor(s)
      吉田稔, 西野憲和
    • Industrial Property Rights Holder
      理化学研究所, CASTI
    • Industrial Property Number
      2003-177298
    • Filing Date
      2003-06-20
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Patent(Industrial Property Rights)] ヒストン脱アセチル化酵素阻害剤およびその製造方法2002

    • Inventor(s)
      吉田稔他2名
    • Industrial Property Rights Holder
      吉田稔他2名
    • Industrial Property Number
      2002-044000
    • Filing Date
      2002-02-20
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Yoshida, M., et al.: "From discovery to the coming generation of histone deacetylase inhibitors."Curr.Med.Chem.. 10. 2351-2358 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yashiroda, Y., Yoshida, M.: "Nucleo-cytoplasmic transport of proteins as a target for therapeutic drugs."Curr.Med.Chem.. 10. 741-748 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Tajima, Y., et al.: "CRM1-dependent nuclear export of Smurf1 is essential for negative regulation of transforming growth factor-b signalling by Smad7."J.Biol.Chem.. 278. 10716-10721 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Bradney, C., et al.: "Regulation of E2A activities by histone acetyltransferases in B lymphocyte development."J.Biol.Chem.. 278. 2370-2376 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nishino, N., et al.: "Cyclic tetrapeptides bearing sulfhydoryl group potently inhibit histone deacetylases."Org.Lett.. 5. 5079-5082 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Jang, B.-C., et al.: "Leptomycin B, an inhibitor of the nuclear export receptor CRM1, inhibits COX-2 expression."J.Biol.Chem.. 278. 2773-2776 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Matsuyama, A., et al.: "In vivo destabilization of dynamic microtutules by HDAC6-mediated deacetylation"EMBO J.. 21. 6820-6831 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hubbert, C., et al.: "HDAC6 is a microtubule-associated deacetylase"Nature. 417. 455-458 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Furumai, R., et al.: "FK228 (depsipeptide) as a natural prodrug that inhibits class I histone deacetylases"Cancer Res.. 62. 4916-4921 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yoshida, Y., et al.: "E3 ubiquitin ligase that recognizes sugar chains"Nature. 418. 438-442 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Westendorf, J.J., et al.: "Runx2 (Cbfa1,AML-3) interacts with histone deacetylase 6 and represses the p21CIP1/WAF1"Mol. Cell. Biol.. 22. 7982-7992 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sakai, Y., et al.: "GEX1 compounds, novel antitumor antibiotics related to herboxidiene, produced by Streptomyces sp."J. Antibiot.. 55. 863-872 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Akakura et al.: "A role for Hsc70 in regulating nucleo-cytoplasmic transport of a temperature-sensitive p53 (p53^<Val135>)"J. Biol. Chem.. 276. 14649-14657 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Forgues et al.: "Interaction of the Hepatitis B virus X protein with the Crm1-dependent nuclear export pathway"J. Biol. Chem.. 276. 22797-22803 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Eleftheriou et al.: "Nuclear export of human β-catenin can occur independent of ORM1 and APC"J. Blot. Chem.. 276. 25883-25888 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Hirano et al.: "Direct demonstration of rapid degradation of nuclear sterol regulatory element-binding proteins by ubiquitin-proteasome pathway"J. Blot. Chem.. 276. 36431-36437 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Furumai et al.: "Potent histone deacetylase inhibitors built from trichostatin A and cyclic tetrapeptide antibiotics including trapoxin"Proc. Natl. Acad. Sci. USA.. 98. 87-92 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Komatsu et al.: "Cyclic Hydroxamic-acid-containing Peptide 31, a potent synthetic histone deacetylase inhibitor with antitumor activity"Cancer Res.. 61. 4459-4466 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Huang,T. et al.: "A nuclear export signal in the N-terminal regulatory domain of IκBα controls cytoplasmic localization of the inactive NF-κB/IκBα complexes."Proc.Natl.Acad.Sci.USA.. 97. 1014-1019 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Hoshino,H. et al.: "Oxidative stress abolishes leptoomycin B-sensitive nuclear export of transcription repressor Bach2 that counteracts activation of Maf recognition element."J.Biol.Chem.. 275. 15370-15376 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Ki,S.W. et al.: "Radicicol binds and inhibits mammalian ATP citrate lyase."J.Biol.Chem.. 275. 39231-29236 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Verdel,A. et al.: "Active maintenance of mHDA2/mHDAC6 histone-deacetylase in the cytoplasm."Curr.Biol.. 10. 747-749 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Furumai,R. et al.: "Potent histone deacetylase inhibitors built from trichostatin A and cyclic tetrapeptide antibiotics including trapoxin."Proc.Natl.Acad.Sci.USA.. 98. 87-92 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Akakura,S. et al.: "A role Hsc70 in regulating nucleo-cytoplasmic transport of a temperature-sensitive p53 (p53^<Vall35>)."J.Biol.Chem.. 276(印刷中). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yoshida,M.: "Cell proliferation : From signal transduction to cell cycle. In : H.Osada (ed.) Bioprobe"Springer-Verlag. 319 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2018-03-28  

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