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A study of genetic management of fish population and genetic diversity used micro satellite DNA markers

Research Project

Project/Area Number 12306010
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field General fisheries
Research InstitutionTohoku University

Principal Investigator

TANIGUCHI Nobuhiko  Graduate school of Agricultural Science, Professor, 大学院・農学研究科, 教授 (20036742)

Co-Investigator(Kenkyū-buntansha) TAKAGI Motohiro  Faculty of Agriculture, Ehime University, Associate Professor, 農学部, 助教授 (70335892)
IKEDA Minoru  Faculty of Agriculture, Tohoku University, Research Associate, 農学部, 教務職員 (70232204)
NAKAJIMA Masamichi  Graduate School of Agricultural Science, Tohoku University, Associate Professor, 大学院・農学研究科, 助教授 (20192221)
鹿野 隆人  東北大学, 大学院・農学研究科, 日本学術振興会特別研究員
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥42,510,000 (Direct Cost: ¥39,600,000、Indirect Cost: ¥2,910,000)
Fiscal Year 2002: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2001: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2000: ¥29,900,000 (Direct Cost: ¥29,900,000)
KeywordsMicrosatellite DNA / Population Genetics / Genetic Diversity / Artificial Seed / Experimental Fish / Endangered Species
Research Abstract

Following species were examined for the research experiment of genetic divereity in fishes, Ayu and Masu salmon as representative natural population, Koi carp as representative ornamental fish, Surf fish as representative viviparous fish, Guppy as experimental fish, and Ryukyu-Ayu and Matsukaws as endangered species.
In these species, microsatellite DNA markers were developed to evaluate genetic diversity.
Genetic characteristics such as genetic variability and differences were measured in each species used microsatellite DNA markers.
The reduction of genetic diversity calculated from average heterozygosity in cultured populations were observed as the results of inbreeding.
From the estimation of effective size of population in each cultured population and seed population for release, the degree of emergency could be estimated in the population of the endangered species.
The influence of inbreeding to the population were estimated and methods of remediation was proposed. From the simulation of cross experiment based on the genotype data of parent population, the methods for the genetic remediation in endangered species and conservation of genetic diversity were also proporsed.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (46 results)

All Other

All Publications (46 results)

  • [Publications] N.Taniguchi, R.Perez-Enriquez, Nugurohot Estu: "DNA markers as a tool for genetic management of broodstock for aquaculture"Springer-Verlag. 47-429 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N.Taniguchi: "Availability of genetic information from hypersensitive DNA markers for hatchery stock management and wild stock conservation"Second International Symposium on Stock Enhancement and Sea Ranching, Jan.28.Feb.1. (in press). (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Sugaya, M.Ikeda, N.Taniguchi: "Relatedness structure estimated by microsatellite DNA markers and mitochondrial DNA PCR-RFLP in the wild population of kuruma prawn Penaeus japonicus"Fisheries Science. 68. 793-802 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Shikano, N.Taniguchi: "Relationships between genetic variation measured by microsatellite DNA markers and a fitness-related trait in the guppy, Poecilia reticulata"Aquaculture. 209. 77-90 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] A.Muller-Belecke, K.Ohara, W.Koedprang, N.Taniguchi: "Environmental influence on quantitative traits of naturally isogenic lines of ginbuna (Carassius langsdorfii)"Aquaculture. 203. 251-262 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Shikano, N.Taniguchi: "Heterosis for neonatal survival on the guppy"Journal of Fish Biology. 60. 715-725 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Sugaya, M.Ikeda, H.Mori, N.Taniguchi: "Inheritance mode of microsatellite DNA marker and their use for kinship estimation in kuruma prawn Penaeus Japonicus"Fisheries Science. 68. 299-305 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K.Sakamoto, W.Koedprang, M.Nakajima, N.Taniguchi: "Themal resistance traits of the clonal silver crucian carp Carrasius langsdorfii and evaluation of these traits using primary culture cells"Fisheries Science. 68. 1029-1033 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] W.Koedprang, M.Nakajima, M.Maita, N.Nakajima: "Correlation of hematology and plasma chemistry levels in silver crucian carp Carassius langsdorfii"Fisheries Science. 68. 721-728 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] A.A.Barinova, K.Kumagai, M.Nakajima, N.Taniguchi: "Identification. and chracterization of microsatellite DNA markers developd in threeline grunt Parapristipoma trilineatum"Fish Genet. Breed. Science. 32. 27-32 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Ikeda, N.Taniguchi: "Genetic variability and divergence in populations of ayu, including endangered subspecies, from PCR-RFLP of the mtDNA"Fisheries Science. 68. 18-26 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Nakajima, N.Taniguchi: "Genetic control of growth in the guppy"Aquaculture. 204. 393-405 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N. Taniguchi, R. Perez-Enriquez, E. Nuguroho: "DNA markers as a tool for genetic management of bloodstock for aquaculture."Springer-Verlag. 47-429 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N. Taniguchi: "Availability of genetic information from hypersensitive DNA markers for hatchery stock management and wild stock conservation."Second International Symposium on Stock Enhancement and Sea Ranching.. Jan. 28-Feb.. 1 (in press) (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T. Sugaya, M. Ikeda, N. Taniguchi: "Relatedness structure estimated by microsatellite DNA markers and mitochondrial DNA PCR-RFLP in the wild population of kuruma prawn Penaeus japonicus."Fisheries Science. 68. 793-802 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T. Shikano, N. Taniguchi: "Relationships between genetic variation measured by microsatellite DNA markers and a fitness-related trait in the guppy"Poecilia reticulate. Aquaculture. 209. 77-90 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] A. Muller-Belecke, K. Ohara, W. koedprang, N. Taniguchi: "Environmental influence on quantitative traits of naturally isogenic lines of ginbura (Carassius langsdorfii)."Aquaculture. 203. 251-262 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T. Shikano, N. Taniguchi: "Heterosis of neonatal survival on the guppy."Journal of Fish Biology. 60. 715-725 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T. Sugaya, M. Ikeda, H. Mori, N. Taniguchi: "Inheritance mode of microsatellite DNA marker and thier use for kinship estimation in kuruma prawn Penaeus japonicus."Fisheries Science. 68. 299-305 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K. Sakamoto, W. Koedprang, M. Nakajima, N. Taniguchi: "Thermal resistance traits of the clonal silver crucian carp Carrasius langsdorfii and evaluation of these traits using primary culture cells."Fisheries Science. 68. 1029-1033 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] W. Koedbrang, M. Nakajima, M. Maita, N. Taniguchi: "Correlation of hematology and plasma chemistry levels in silver crucian carp Carassius langsdorfii."Fisheries Science. 68. 721-728 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] A. Barincba, K. Kumagai, M. Nakajima, N. Taniguchi: "Identification and characterization of microsatellite DNA markers developed in threeline grunt Parapristipo*a trilineatum."Fish Genetics and Breeding Science. 32. 27-32 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M. Nakajima, N. Taniguchi: "Genetic control of growth in the guppy"Poecilia reticulata. Aquaculture. 204. 393-405 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M. Ikeda, N. Taniguchi: "Genetic variability and divergence in populations of ayu, including endangered subspecies. from PCR-RFLP of the mtDNA."Fisheries Science. 68. 18-26 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N.Taniguchi, R.Perez-Enriquez, Nugurohot Estu: "DNA markers as a tool for genetic management of broodstock for aquaculture"Springer-Verlag. 47-429 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] N.Taniguchi: "Availability of genetic information from hypersensitive DNA markers for hatchery stock management and wild stock conservation"Second International Symposium on Stock Enhancement and Sea Ranching, Jan.28.Feb.1. (印刷中). (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Sugaya, M.Ikeda, N.Taniguchi: "Relatedness structure estimated by microsatellite DNA markers and mitochondrial DNA PCR-RFLP in the wild population of kuruma prawn Penaeus japonicus"Fisheries Science. 68. 793-802 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Shikano, N.Taniguchi: "Relationships between genetic variation measured by microsatellite DNA markers and a fitness-related trait in the guppy, Poecilia reticulata"Aquaculture. 209. 77-90 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] A.Muller-Belecke, K.Ohara, W.Koedprang, N.Taniguchi: "Environmental influence on quantitative traits of naturally isogenic lines of ginbuna(Carassius langsdorfii)"Aquaculture. 203. 251-262 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Shikano, N.Taniguchi: "Heterosis for neonatal survival on the guppy"Journal of Fish Biology. 60. 715-725 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Sugaya, M.Ikeda, H.Mori, N.Taniguchi: "Inheritance mode of microsatellite DNA marker and their use for kinship estimation in kuruma prawn Penaeus Japonicus"Fisheries Science. 68. 299-305 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Sakamoto, W.Koedprang, M.Nakajima, N.Taniguchi: "Themal resistance traits of the clonal silver crucian carp Carrasius langsdorfii and evaluation of these traits using primary culture cells"Fisheries Science. 68. 1029-1033 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] W.Koedprang, M.Nakajima, M.Maita, N.Nakajima: "Correlation of hematology and plasma chemistry levels in silver crucian carp Carassius langsdorfii"Fisheries Science. 68. 721-728 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] A.A.Barinova, K.Kumagai, M.Nakajima, N.Taniguchi: "Identification and chracterization of microsatellite DNA markers developd in threeline grunt Parapristipoma trilineatum"Fish Genet. Breed. Science. 32. 27-32 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] M.Ikeda, N.Taniguchi: "Genetic variability and divergence in populations of ayu, including endangered subspecies, from PCR-RFLP of the mtDNA"Fisheries Science. 68. 18-26 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] M.Nakajima, N.Taniguchi: "Genetic control of growth in the guppy"Aquaculture. 204. 393-405 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] R.Perez-Enriquez, M.Takemura, K.Tabata, N.Taniguchi: "Genetic diversity of red sea bream Pagrus major in western Japan in relation to stock enhancement"FISHERIES SCIENCE. 67(1). 71-78 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] E.Nugroho, D.J Ferrell, P.Smith, N.Taniguchi: "Genetic divergence of kingfish from Japan Australia and New Zealand inferred by microsatellite DNA and mitochondrial DNA control region markers"FISHERIES SCIENCE. 67(5). 843-853 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] M.Ikeda, N.Taniguchi: "Genetic variation and divergence in populations of ayu Plecoglossus altivehs, including endangered subspecies, inferred from PCR-RFLP analysis of the mitochondrial DNA D-loop region"FISHERIES SCIENCE. 68(1). 18-26 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] M.Nakajima, N.Taniguchi.: "Genetics of the guppy as a model for experiment in aquaculture"Genetica. 111. 279-289 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Shikano, T.Chiyokubo, N.Taniguchi: "Temporal changes in allele frequency, genetic variation and in breeding depression in small populations of the guppy, Poecilia reticulata"

    • Related Report
      2001 Annual Research Report
  • [Publications] W.Koedprang,K.Ohara and Nobuhiko Taniguchi: "Genetic and environmental variances on growth and reproductive traits of silver crutian carp Carassius langsdorfii using communal and separate rearing systems."FISHERIES SCIENCE. 66(6). 1092-1099 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] R.S.Aliah,S.Sato,and Nobuhiko Taniguchi: "An evaluation of genetic variability in Nishikigoi, Cyprinus carpio, stocks from Niigata prefecture, based on microsatellite DNA markers."SUISANZOSHOKU. 48(1). 25-31 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Nugroho,Nobuhiko Taniguchi,K.Kato and S.Miyashita: "Genetic difference among seed populations of greater amberjack used in aquaculture farm of Japan."SUISANZOSHOKU. 48(4). 665-674 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 吉田一範,高木基裕,田中克,谷口順彦: "マイクロサテライトDNA多型によるヒラメ集団と放流用人工種苗の遺伝的変異性と変異。"水産育種. 29. 93-102 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] R.S.Aliah and Nobuhiko Taniguchi: "Gene-centromere distances of six microsatellite DNA loci in gynogenetic Nishikigoi (Cyprinus carpio)."水産育種. 29. 113-119 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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