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GENETIC ANALYSIS ON AUTOIMMUNE THYROID DISEASE

Research Project

Project/Area Number 12307056
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Human genetics
Research InstitutionRESEARCH INSTITUTE, INTERNATIONAL MEDICAL CENTER OF JAPAN (2001-2003)
Kyushu University (2000)

Principal Investigator

SHIRASAWA Senji  RESEARCH INSTITUTE, INTERNATIONAL MEDICAL CENTER OF JAPAN, DEPARTMENT OF PATHOLOGY, DIRECTOR, 部長 (10253535)

Co-Investigator(Kenkyū-buntansha) SASAZUKI Takehiko  RESEARCH INSTITUTE, INTERNATIONAL MEDICAL CENTER OF JAPAN, DIRECTOR-GENERAL, 所長 (50014121)
HARADA Haruhito  RESEARCH INSTITUTE, INTERNATIONAL MEDICAL CENTER OF JAPAN, DEPARTMENT OF PATHOLOGY, SECTION CHIEF, 室長 (00271429)
YAMAMOTO Ken  KYUSYU UNIVERSITY, MEDICAL INSTITUTION OF BIOREGULATION, ASSISTANT PROFESSOR, 生体防御医学研究所, 助教授 (60274528)
Project Period (FY) 2000 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥37,730,000 (Direct Cost: ¥31,700,000、Indirect Cost: ¥6,030,000)
Fiscal Year 2003: ¥7,410,000 (Direct Cost: ¥5,700,000、Indirect Cost: ¥1,710,000)
Fiscal Year 2002: ¥9,360,000 (Direct Cost: ¥7,200,000、Indirect Cost: ¥2,160,000)
Fiscal Year 2001: ¥9,360,000 (Direct Cost: ¥7,200,000、Indirect Cost: ¥2,160,000)
Fiscal Year 2000: ¥11,600,000 (Direct Cost: ¥11,600,000)
KeywordsAITD / susceptibility gene / microsatellite marker / SNP / affected sib-pairs / linkage / association / antisense RNA / ZFAT / B細胞 / Graves病 / 橋本病 / 罹患同胞対法 / SNP / 自己免疫疾患 / 甲状腺
Research Abstract

Autoimmune thyroid disease (AITD), including Graves' disease (GD) and Hashimoto's thyroiditis (HT), is caused by immune response to the thyroid gland and is a complex disease with both genetic and environmental factors. A genome-wide linkage analysis using the affected sib-pairs with AITD was done, indicating that chromosome 5q31-q33 and 8q23-q24 were candidate AITD susceptibility regions. Association analysis using microsatellite markers and SNPs in 8q23-q24 and linkage disequilibrium analysis narrowed the susceptibility region up to 60 kb-length. We have identified a novel zinc-finger gene in AITD susceptibility region, designated ZFAT, as one of the susceptibility genes for AITD, which encodes a protein of 1,253 amino acids with 18-repeats of zinc-finger domains. The T allele of the EX9b-SNP10, located in the intron 9 of ZFAT, is associated with increased risk for AITD (dominant model : odds ratio=1.7, P=0.000091). The Ex9b-SNP10 falls into the 3'UTR of truncated (TR)-ZFAT and the promoter region of the small antisense transcript (SAS)-ZFAT. SAS-ZFAT is exclusively expressed in B cells in peripheral blood lymphocytes, and expression levels of SAS-ZFAT and TR-ZFAT correlated with the Ex9b-SNP10-T, inversely and positively, respectively. In vitro analysis revealed that the Ex9b-SNP10 is critically involved in the regulation of SAS-ZFAT expression and this expression results in a decreased expression of TR-ZFAT. All these results, together, suggested that the Ex9b-SNP10-associated ZFAT-allele might play a critical role in B cell function by affecting the expression level of TR-ZFAT through regulating SAS-ZFAT expression.

Report

(5 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (49 results)

All 2004 2003 2002 2001 Other

All Journal Article (8 results) Publications (41 results)

  • [Journal Article] Association of the T-cell regulatory gene CTLA4 with Graves' disease and autoimmune thyroid disease in the Japanese.2004

    • Author(s)
      Furugaki K et al.
    • Journal Title

      Journal of Human Genetics 49

      Pages: 166-168

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Association of the T-cell regulatory gene CTLA4 with pressGraves' disease and autoimmune thyroid disease in the Japanese.2004

    • Author(s)
      Furugaki, K., et al.
    • Journal Title

      Journal of Human Genetics 49

      Pages: 166-168

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] 自己免疫性甲状腺疾患感受性遺伝子の解明2003

    • Author(s)
      白澤 専二
    • Journal Title

      最新医学 58

      Pages: 1649-1656

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] 自己免疫性甲状腺疾患感受性遺伝子の解明AITS-1遺伝子の同定2003

    • Author(s)
      白澤 専二
    • Journal Title

      実験医学 21

      Pages: 25-29

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] 自己免疫性甲状腺疾患のゲノム解析2002

    • Author(s)
      白澤 専二
    • Journal Title

      医学のあゆみ 202

      Pages: 827-832

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] 自己免疫性甲状腺疾患とゲノム2002

    • Author(s)
      白澤 専二
    • Journal Title

      ゲノム医学 2

      Pages: 149-157

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Identification of susceptibility loci for autoimmune thyroid disease to 5q31-q33 and Hashimoto's thyroiditis to 8q23-q24 by multipoint affected sib-pair linkage analysis in Japanese.2001

    • Author(s)
      Sakai K et al.
    • Journal Title

      Human Molecular Genetics 10

      Pages: 1379-1386

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Identification of susceptibility loci for autoimmune thyroid disease to 5q31-q33 and Hashimoto's thyroiditis to 8q23-q24 by multipoint affected sib-pair linkage analysis in Japanese.2001

    • Author(s)
      Sakai, K., et al.
    • Journal Title

      Human Molecular Genetics 10

      Pages: 1379-1386

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Furugaki K et al.: "Association of the T-cell regulatory gene CTLA4 with Graves' disease and autoimmune thyroid disease in the Japanese."Journal of Human Genetics. (in press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Inokuchi J et al.: "Deregulated expression of KRAP, a novel gene encoding actin-interacting protein, in human colon cancer cells."Journal of Human Genetics. 49・1. 46-52 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yamamoto K et al.: "Polycomb group, Suppressor of Zeste 12, links heterochromatin protein 1alpha and enhancer of Zeste 2."The Journal Biological Chemistry. 2279・1. 401-406 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Klampfer L et al.: "Oncogenic k-ras inhibits the expression of IFN-responsive genes through inhibition of STAT1 and STAT2 expression."The Journal Biological Chemistry. 278・47. 46278-46287 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Klampfer L et al.: "Inhibition of IFN-gamma signaling by the short chain fatty acid butyrate."Molecular Cancer Research. 1・11. 855-862 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Parisi MA et al.: "Genetic background modifies intestinal pseudo-obstruction and the expression of a reporter gene in Hox11L1-/-mice."Gastroenterology. 125・5. 1428-1440 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Long IS et al.: "Met Receptor Overexpression and Oncogenic Ki-ras Mutation Cooperate to Enhance Tumorigenicity of Colon Cancer Cells in Vivo."Molecular Cancer Research. 1・5. 393-401 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Shirasawa S et al.: "The impact of oncogenes on tumor maintenance"Oncogene-Directed Therapies (Rak JW. Ed., Human Press Inc., Totowa). 229-243 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Tsunoda T et al.: "A novel mechanism of nuclear factor κB activation through the binding between inhibitor of nuclear factor-κBα' and the processed NH_2-terminal region of Mig-6"Cancer Research. 62・20. 5668-5671 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kanai M et al.: "Congenital central hypoventilation syndrome: a novel mutation of the RET gene in an isolated case"Tohoku Journal of Experimental Medicine. 196. 241-246 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Qian Y et al.: "Proper development of relay somatic sensory neurons and D2/D4 interneurons requires homeobox genes Rnx/Tlx-3 and Tlx-1"Genes and Development. 16. 1220-1233 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yoshida S et al.: "Head-to-head juxtaposition of Fas-associated phosphatase-1 (FAP-1) and c-Jun NH2-terminal kinase 3 (JNK3) genes : genomic strucure and seven polymorphisms of the FAP-1 gene"Journal of Human Genetics. 47・11. 614-619 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Harada H et al.: "Down-regulation of a novel gene, DRLM, in human liver malignancy from 4q22 that encodes a NAP-like protein"Gene. 296・1-2. 171-177 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Tsuneizumi M et al.: "A highly polymorphic CA repeat marker at the EBAG9/RCAS1 locus on 8q23 that detected frequent multiplication in breast cancer"Annals of Human Biology. 29・4. 457-460 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Harada H et al.: "Genomic structure and eight novel exonic polymorphisms of the human N-cadherin gene"Journal of Human Genetics. 47・6. 330-332 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Harada H et al.: "Genomic structure of the human NLK (nemo-like kinase) gene and analysis of its promoter region"Gene. 285・1-2. 175-182 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yoshida K et al.: "Evidence for shared recognition of peptide ligand by a diverse panel of nonobese diabetic (NOD) mice-derived, islet-specific, diabetogenic T cell clones"International Immunology. (in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yamamoto K et al.: "HLA and Autoimmune Thyroid Diseases. The Genetics of complex thyroid diseases"The Genetics of complex thyroid diseases. (Springer-Verlag, Tokyo). 55-63 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Morishima Y et al.: "The clinical significance of human leukocyte antigen (HLA) allele compatibility in patients receiving a marrow transplant from serologically HLA-A, HLA-B, and HLA-DR matched unrelated donors."Blood. 99・11. 4200-4206 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Shirasawa S et al.: "The impact of oncogenes on tumor maintenance"Oncongene-Directed Therapies. (in press). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Morishima Y et al.: "The clinical significance of HLA allele compatibility in patients transplanted with marrow from a serologically HLA-A, B and DR matched unrelated donor"Blood. (in press). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Habets G.G et al.: "cDNA array analyses of K-ras-induced gene transcription"Methods Enzymology. 332. 245-260 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Qian Y et al.: "Formation of brainstem (nor)adrenergic centers and first-order relay visceral sensory neurons is dependent on homeodomain protein Rnx/Tlx3"Genes and Development. 15. 2533-2545 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Sakai K, et al.: "Identification of susceptibility loci for autoimmune thyroid disease to 5q31-q33 and Hashimoto's thyroiditis to 8q23-q24 by multipoint affected sib-pair linkage analysis in Japanese"Human Molecular Genetics. 10. 1379-1386 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Miyoshi Y et al.: "A novel autosomal dominant spinocerebellar ataxia (SCA16) linked to chromosome 8q22.1-24.1."Neurology. 57. 96-100 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Wataya M et al.: "Comparative analysis of HLA restriction and cytokine production in hepatitis B surface antigen-specific T cells from low-and high-antibody responders in vaccinated humans"Journal of Human Genetics. 46・4. 197-206 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Ono T et al.: "Organ-specific autoimmunity in mice whose T cell repertoire is shaped by a single antigenic peptide"Journal of Clinical Investigation. 108. 1589-1596 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Fukui Y et al.: "Haematopoietic cell-specific CDM family protein DOCK2 is essential for lymphocyte migration"Nature. 412. 826-831 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Wataya H et al.: "Quantitation of HLA-A^*0201 bound tumor associated antigens on a peptide pulsed B cell line"Human Immunology. 62. 125-132 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Tsuneizumi M et al.: "Overexpression of the EBAG9 gene at 8q23 associated with early-stage breast cancers"Clinical Cancer Research. 7. 3526-3532 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Harada H et al.: "Molecular cloning, tissue expression, and chromosomal assignment of a novel gene encoding a subunit of the human signal-recognition particle"Journal of Human Genetics. 46. 70-75 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Harada H et al.: "Identification of DMC1, a novel gene in the TOC region on 17q25.1 that shows loss of expression in multiple human cancers"Journal of Human Genetics. 46. 90-95 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Wataya M et al.: "Comparative analysis of HLA restriction and cytokine production of hepatitis B surface antigen-specific T cells from low-and high-antibody responders in vaccinated humans."J.Human Genet.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Baba I et al.: "Involvement of deregulated epiregulin expression in tumorigenesis in vivo through activated Ki-Ras signaling pathway in human colon cancer cells."Cancer Res.. 60. 6886-6889 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Ries S et al.: "Opposing effects of Ras on p53 : transcriptional activation of mdm2 and induction of p19^<ARF>."Cell. 103. 321-330 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Shirasawa S et al.: "Rnx deficiency results in congenital central hypoventilation."Nature Genet.. 24. 287-289 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Dilworth FJ et al.: "ATP-driven chromatin ATP-driven chromatin remodeling activities and coactivator histone acetyltransferases act sequentially during transcriptional activation by RAR/RXR heterodimers vitro."Molecular Cell. 6. 1049-1058 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Fukui Y et al.: "Diversity of T cell repertoire shaped by a single peptide ligand is critically affected by its amino acid residue at a T cell receptor-contact."Proc.Natl.Acad.Sci.USA. 97. 13760-13765 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kawamura K et al.: "Induction of autoimmune encephalitis by proteolipid protein 95-116-specific T cells from HLA-DR2(DRB1*1502) transgenic mice."J.Clin.Invest.. 105. 977-984 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Toh H et al.: "Magnitude of structural changes of the T-cell receptor binding regions determine the strength of T-cell antagonism : mokecular dynamics simulations of HLA-DR4(DRB1*0405) complexd with analogue pedptide."Protein Engineering. 13. 423-429 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Hamaguchi K et al.: "Analysis of tumor necrosis factor-a promoter polymphopism in type 1 diabetes : HLA-B and-DRB1 alleles are primarily associated with the disease in Japanese."Tissue Antigens. 55. 10-16 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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