| Project/Area Number |
12308032
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| Research Category |
Grant-in-Aid for Scientific Research (A)
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| Allocation Type | Single-year Grants |
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| Section | 一般 |
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| Research Field |
Structural biochemistry
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| Research Institution | Tokyo Metropolitan Institute of Gerontology |
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Principal Investigator |
SUZUKI Koichi Tokyo Metropolitan Institute of Gerontology, Director, 所長 (80011948)
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| Co-Investigator(Kenkyū-buntansha) |
SORIMACHI Hiroyuki University of Tokyo, Graduate School of Agricultural and Life Sciences Department of Applied Biological Chemistry,, 農学生命科学研究科・応用生命化学専攻, 助教授 (10211327)
INOMATA Mitsushi Tokyo Metropolitan Institute of Gerontology, Division of Molecular Biology, Department of Protein Biochemistry, Researcher, 分子生物学研究系・蛋白質生化学部門, 研究員 (30142649)
IWASHITA Yoshiko Tokyo Metropolitan Institute of Gerontology, Division of Molecular Biology, Department of Protein Biochemistry, Department Head, 分子生物学研究系・蛋白質生化学部門, 室長 (50111498)
MAEDA Tatsuya University of Tokyo, Institute of Molecular and Cellular Biosciences Associate Professor, 分子細胞生物学研究所, 助教授 (90280627)
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| Project Period (FY) |
2000 – 2001
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| Project Status |
Completed (Fiscal Year 2001)
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| Budget Amount *help |
¥33,900,000 (Direct Cost: ¥31,800,000、Indirect Cost: ¥2,100,000)
Fiscal Year 2001: ¥9,100,000 (Direct Cost: ¥7,000,000、Indirect Cost: ¥2,100,000)
Fiscal Year 2000: ¥24,800,000 (Direct Cost: ¥24,800,000)
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| Keywords | Calpain / Calcium / Protease / X ray structural analysis / Higher order structure of protein / Activation mechanism / Phopsholipids / 蛋白質の構造変化 / リン脂質 |
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| Research Abstract |
Calpain is composed of two subunits, 80K and 30K, but 80K itself expresses full enzyme activity. The results of X ray analysis of calpain in the absence of Ca, show that the protease domain (II) of 80K comprising domains (I-IV) is composed of two sub-domains, II and Iib, which are quite similar to those in other cysteine proteases. However, they are separated and the proper active-site that exists between the two sub-domains is not formed. The activation mechanism corresponding to how these two sub-domains come closer to forn proper active-site by conformational changes induced by Ca, was examined. Two sub-domains are separated mainly by two kinds of interactions, interaction between I and cahnodulin domain (VI) in 30K, and interaction of lib with III. Upon binding Ca to VI and III, these interactions are disrupted resulting in large conformational changes that make two sub-domains come closer. Further, minor conformational changes induced by Ca binding to II are essential to make II active. Ill plays very important roles in this activation ; acting as the novel Ca binding sites, and also as the phopspholipids binding domain that determines cellular localization of active calpain. A novel Ca binding site was also predicted in II but its precise location is still unknown. To know the structure of Ca-bound form of calpain is essential to understand the final activation mechanism. Further experiments are now in progress along this line.
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