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Hunt for early diverged stramenopiles and construction of taxonomic system

Research Project

Project/Area Number 12440239
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 系統・分類
Research InstitutionUniversity of Tsukuba

Principal Investigator

INOUYE Isao  Institute of Biological Sciences, Professor, 生物科学系, 教授 (70168433)

Co-Investigator(Kenkyū-buntansha) NAKAYAMA Takeshi  Institute of Biological Sciences, Lecturer, 生物科学系, 講師 (40302369)
堀 輝三  筑波大学, 生物科学系, 教授 (90057563)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥13,800,000 (Direct Cost: ¥13,800,000)
Fiscal Year 2002: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 2001: ¥5,300,000 (Direct Cost: ¥5,300,000)
Fiscal Year 2000: ¥7,300,000 (Direct Cost: ¥7,300,000)
Keywordsstramenopiles / Heterokont chromophytes / flagellates / ultrastructure / molecular phyologeny / rbcL / Pinguiophyceae / Placidiophyceae / 分枝系統 / 食作用 / 形質進化 / Wobblia
Research Abstract

The following results were obtained during the period of this research :
1. Undescribed two heterotrophic stramenopiles were discovered and reported as two new genera, Wobblia and Placidea. Molecular analyzes indicated these organisms diverged before emergence of the heterokont chromophytes, and that they form a clade independent from any known clades of the stramenopiles. A new class Placididea or Placidiophyceae was proposed.
2. A new class of heterokont chromophytes, Pinguiophyceae, was proposed. This class is biochemically characterized : all the members so far known produce rich omega 3 fatty acids.
3. Non-photosynthetic stramenopiles, Ptendomonas and Ciliophrys, were revealed to have chloroplast encoded gene rbcL. The gene was almost intact and unlikely a pseudogene. In Pteridomonas, the presence of vestigial chloroplast was confirmed with the electron microscope.
4. Three orders of the class Dictyochophyceae were investigated with EM and molecular data (18S rDNA and rbcL). Taxonomic characters appeared in previously published articles were reevaluated based on cladistics of using morphological (LM and EM) and behavioral characters, and diagnostic characters of genera were considered. Practical guide for classification of Pedinellales genera was proposed.
5. An amoeboid alga presumably a primitive member of the class Dictyochophyceae was discovered and examined. This organism formed a clade with Sulcochrysis described as incertae cedis. A proposal of a new order Sulcochrysidaies is under process.
6. An amoeboid alga that produce biflagellate swimming cells in the life cycle was discovered. Comparison of this alga with other members of the Dictyochophyceae suggested that primitive state of the class was biflagellate and possession of typical stramenopile flagellar apparatus.
The results obtained allowed to reconstruct character evolution presumably occurred in major clades of the stramenopiles.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (29 results)

All Other

All Publications (29 results)

  • [Publications] Kawachi, Inouye, Honda, O'Kelly, Bailey, Bidigare, Andersen: "The Pinguiophyceae classis nova, a new class of photosynthetic stramenopiles whose members produce large amounts of omega-3 fatty acids"Phycological Research. 50. 31-47 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Honda, D., Inouye, I.: "Ultrastructure and taxonomy of a marine photosynthetic stramenopile Phaeomonas parva gen. et sp. nov. (Pinguiophyceae) with emphasis on the flagellar apparatus"Phycological Research. 50. 75-89 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Moriya, M., Nakayama, T., Inouye, I.: "A New Class of the Stramenopiles, Placididea Classis nova : Description of Placidia cafeteriopsis gen. et sp. nov."Protist. 153. 143-156 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sekiguchi, H., Moriya, M., Nakayama, T., Inouye, I.: "Vestigial Chloroplasts in Heterotrophic Stramenopiles Pteridomonas danica and Ciliophrys infusiomun (Dictyochophyceae)"Protist. 153. 157-167 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sekiguchi, H., Kawachi, M., Nakayama, T., Inouye, I.: "Pedinella squamata sp. nov. and a taxonomic re-evaluation of the Pedinellales (Dictyochophyceae, stramenopiles) based on morphological, behavioral and molecular data"Phycologia. 153(印刷中). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshii,Y., Takaichi,S., Maoka,T. and Inouye,I.: "Photosynthetic pigment composition in the primitive green alga Mesostigma viride (Prasinophyceae) : Phylogenetic and evolutionary implications"J.Phycology. in press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sekiguchi,H., Kawachi,M., Nakayama,T. and Inouye,I.: "Pedinella squamata sp. nov. and a taxonomic re-evaluation of the Pedinellales (Dictyochophyceae, stramenopiles) based on morphological, behavioral and molecular data"Phycologia. in press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshii,Y., Takaichi,S., Maoka,M., Hanada,S. and Inouye,I.: "Characterization of two unique carotenoid fatty acid esters from Pterosperma cristatum (Prasmophyceae, Chlorophyta)"J.Phycol.. 38. 297-303 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kawachi,M., Inouye,I., Honda,D., O'Kelly,C.J., Bailey,J.C., Bidigare,R.R. and Andersen,R.A.: "The Pinguiophyceae classis nova, a new class of photosynthetic stramenopiles whose members produce large amounts of omega-3 fatty acids"Phycological Research. 50. 31-47 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Honda,D., and Inouye,I.: "Ultrastructure and taxonomy of a marine photosynthetic stramenopile Phaeomonas parva gen. et. sp. nov. (Pinguiophyceae) with emphasis on the flagellar apparatus architecture"Phycological Research. 50. 75-89 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Monya,M., Nakayama,T. and Inouye,I.: "A new class of the stramenopiles, Plaididea classis nova : description of Placidia cafeteriopsis gen. et. sp. nov."Protist. 153. 143-156 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sekiguchi,H., Moriya,M., Nakayama,T. and Inouye,I.: "Vestigial chloroplasts in heterotrophic stramenopiles Pteridomonas danica and Ciliophrys infusionum (Dictyochophyceae)"Protist. 153. 157-167 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Fujiwaral,S., Kawachi,M., Minaka,N., Tsuzuki,M. and Inouye,I.: "A molecular phylogeny of the Haptophyta based on the rbcL gene and the spacer region of RuBisCO operon"J.Phycol.. 37. 121-129 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hirayama,S., Ueda,R., Nakayama,T. and Inouye,I.: "Chlamydomonas perigranulata sp. nov. (Chlamydomonadales, Chlorophyceae) from the Red Sea"Botanica Marina. 44. 41-46 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kawachi, Inouye, Honda, O'Kelly, Bailey, Bidigare, Andersen: "The Pinguiophyceae classis nova, a new class of photosynthetic stramenopiles whose members produce large amounts of omega-3 fatty acids"Phycological Research. 50. 31-47 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Honda, D., Inouye, I: "Ultrastructure and taxonomy of a marine photosynthetic stramenopile Phaeomonas parva gen. et sp. nov. (Pinguiophyceae) with emphasis on the flagellar apparatus"Phycological Research. 50. 75-89 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Moriya, M., Nakayama, T., Inouye, I.: "A New Class of the Stramenopiles, Placididea Classis nova : Description of Placidia cafeteriopsis gen. et sp. nov."Protist. 153. 143-156 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sekiguchi, H., Moriya, M., Nakayama, T., Inouye, I.: "Vestigial Chloroplasts in Heterotrophic Stramenopiles Pteridomonas danica and Cliophrys infusiomun(Dictyochophyceae)"Protist. 153. 157-167 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sekiguchi, H., Kawachi, M., Nakayama, T., Inouye, I.: "Pedinella squamata sp. nov. and a taxonomic re-evaluation of the Pedinellales (Dictyochophyceae, stramenopiles) based on morphological, behavioral and molecular data"Phycologia. 153(印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Fujiwara1, S., Kawachi, M., Minaka, N., Tsuzuki, M., Inouye, I.: "A molecular phylogeny of the Haptophyta based on the rbcL gene and the spacer region of RuBisCO operon."Journal of Phycology. 37. 121-129 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Hirayama, S., Ueda, R., Nakayama, T., Inouye, I.: "Chlamydomonas perigranulata sp.Nov.(Chlamydomonadales,Chlorophyceae)from the Red Sea."Botanica Marina. 44. 41-46 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Honda, D., Inouye, I.: "Ultrastrucature and taxonomy of a marine photosynthetic stramenopile Phaeomonas parva gen.et sp.Nov.(Pinguiophyceae)with emphasis on the flagellar apparatus architecture."Phycological Research. 50(印刷中). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kawachi, M., Inouye, I., Honda, D., O'Kelly, C.J., Bailey, J.C., Bidigare, R.R., Andersen, R.A.: "The Pinguiophyceae classis nova,a new class of chromophyte algae whose members produce large amounts of omega-3 fatty acids."Phycological Research. 50(印刷中). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Nakayama,T.and Inouye,I.: "Ultrastructure of the biflagellate gametes of Collinsiella cava (Ulvophyceae, Chlorophyta)."Phycological Research. 48. 63-73 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Woongghi,S.,Boo,S.M.and Inouye,I.: "Ultrastructure of Euglena anabaena var.minor."Phycological Research. 48. 19-26 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Moriya,M.,Nakayama,T.and Inouye,I.: "Ultrastructure and 18SrDNA sequence analysis of Wobblia lunata gen.et sp.nov.,a new heterotrophic flagellate(stramenopiles,incertae sedis)."Protist . 50. 835-846 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yamamoto,M.,Shiraiwa,Y.and Isao Inouye,I.: "Physiological responses of lipids in Emiliania huxleyi and Gephyrocapsa oceanica(Haptophyceae)to growth"Organic Geochemistry. 31. 799-811 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nakayama,T.,Kawachi,M.and Inouye,I.: "Ultrastructure and thephylogenetic position of a new prasinophycean alga,Crustomastix didyma gen.et sp.nov."Phycologia. 39. 337-348 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 井上勲: "藻類の多様性 新たな生物の世界が見えてきた。"国立科学博物館. 56 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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