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Molecular mechanism of iron acquisition in Graminaceous plants

Research Project

Project/Area Number 12460030
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Plant nutrition/Soil science
Research InstitutionThe University of Tokyo

Principal Investigator

NISHIZAWA Naoko  Graduate School of Agriculture and Life Sciences, The University of Tokyo, Professor, 大学院・農学生命科学研究科, 教授 (70156066)

Co-Investigator(Kenkyū-buntansha) NAKANISHI Hiromi  Graduate School of Agriculture and Life Sciences, The University of Tokyo, Assistant, 大学院・農学生命科学研究科, 助手 (80282698)
Project Period (FY) 2000 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥12,900,000 (Direct Cost: ¥12,900,000)
Fiscal Year 2001: ¥4,900,000 (Direct Cost: ¥4,900,000)
Fiscal Year 2000: ¥8,000,000 (Direct Cost: ¥8,000,000)
KeywordsIron deficiency / Graminaceous plants / Barley / Mugineic acid family phytosiderophores / Deoxymugineic acid synthase / Aldo-keto reductase / Iron chelator / Biosynthetic pathway of mugineic acid family phytosiderophores / アルドーケト還元酵素 / ケト体還元酵素 / トランスポーター
Research Abstract

Graminaceous plants secrete mugineic acid family phytosiderophores (MAs) from their roots to acquire Fe. The production and the secretion of MAs are markedly increased in response to Fe-deficiency. MAs are synthesized from L-methionine. Methionine is converted to S-adenosylmetionine (SAM) by SAM synthetase. Three molecules of SAM are combined into one molecule of nicotianamine (NA) by NA synthase (NAS) and an amino group of NA is transferred by NA aminotransferase (NAAT) to form a 2'-keto intermediate, which is subsequently reduced to 2'-deoxymugineic acid (DMA), the initial member of the MAs. We isolated the genes for SAM synthetase, NAS and NAAT from barley, rice and maize. However, genes for the reductase catalyzing the conversion of keto-form to DMA had not been isolated in this biosynthetic pathway. Therefore, we attempted to isolate the gene encoding this enzyme. Since the enzyme is a NAD(P)H-dependent reductase, we assumed that the enzyme might be a member of an aldo-keto reductase superfamily. Based on the protein sequences highly conserved in this family, we designed degenerate primers for PCR and obtained three PCR products. Northern blot analysis using these PCR fragments showed that the expression of one fragment was induced by Fe-deficiency in barley roots. We used this 500 bp fragment for the probe to screen cDNA library prepared from Fe-deficient barley roots and obtained two cDNA clones. Northern blot analysis showed that the expression of both cDNAs was induced in response to Fe-deficiency and suppressed by Fe supply. The protein products of these cDNAs showed the enzyme activity to convert keto-form to DMA. Thus, we could isolate the two genes for DMA synthase from barley. As a result, we have isolated the genes for all the enzymes participated in the biosynthetic pathway of MAs.

Report

(3 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • Research Products

    (25 results)

All Other

All Publications (25 results)

  • [Publications] Negisin et al.: "cDNA microarray analysis of gene expression during Fe-deficiency stress in barley suggests that polar transport of vesicles is implicated in phytosiderophore secretion in Fe-deficient barley roots"Plant Journal. (in press). (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Takanasni et ai.: "Enhanced tolerance of rice to low iron availability in alakaline soils using barley nicotianamine aminotransferase genes"Nature Biotechnology. 19. 466-469 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Higuchi et al.: "Nicotianamine synthase gene expression differs in barley and rice under Fe-deficient conditions"Plant Journal. 25. 159-168 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Higucin et al.: "The expression of a barley HvNAS1 nicotianamine synthase gene promoter-gus fusion gene in transgenic tobacco is induced by Fe-deficiency in roots"Bioscience Biotechnoogyl Biochemistry. 65. 1692-1696 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Higucin et al.: "Analysis of transgenic rice containing barley nicotianamine synthase gene"Soil Science and Plant Nutrition. 47. 315-322 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kobayashi et al.: "In-vivo evidence that Ids3 from Hordeum vulgare encodes a dioxygenase deoxymugineic acid to mugineic acid in transgenic rice"Planta. 212. 864-871 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yamaguchi H, Nakanishi H, Nishizawa NK, Mori S: "Induction of the IDI1 gene in Fe-deficient barley roots : a gene encoding a putative enzyme that catalyses the methionine salvage pathway for phytosiderophore production"Soil Sci Plant Nutr. 46. 1-9 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yamaguchi H, Nakanishi H, Nishizawa NK, Mori S: "Isolation and characterization of IDI2, a new Fe-deficiency induced cDNA from barley roots, which encodes a protein related to the αsubunit of eukaryotic initiation factor 2B(eIF2Bα)"J Exp Bot. 51. 2001-2007 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kobayashi T., Nakanishi H., Takahashi M., Kawasaki S., Nishizawa N. K., Mori S: "In-vivo evidence that Ids3 from Hordeum vulgare encodes a dioxygenase that converts 2-deoxymugineic acid to mugineic acid in transgenic rice"Planta. 212. 864-871

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nakanishi H., Yamaguchi H., Sasakuma T., Nishizawa N. K., Mori S: "Two dioxygenase genes, Ids3 and Ids2, from Hordeum vulgare are involved in the biosynthesis of mugineic acid family phytosiderophores"Plant Molecular Biology. 44. 199-207 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Higuchi K, Watanabe S, Takahashi M, Kawasaki S, Nakanishi H, Nishizawa NK, Mori S: "Nicotianamine synthase gene expression differs in barley and rice under Fe-deficient conditions"Plant J. 25. 159-167 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Higuchi K, Nakanishi NK, Nishizawa NK, Mori S: "Analysis of transgenic rice containing barley nicotianamine synthase gene"Soil Sci Plant Nutr. 47. 315-322 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Takahashi M, Nakanishi H, Kawasaki S, Nishizawa NK, Mori S: "Enhanced tolerance of rice to low iron availability in alkaline soils using barley nicotianamine aminotransferase genes"Nature Biotechnology. 19. 466-469 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Negishi, et al.: "cDNA microarray analysis of gene expression during Fe-deficiency stress in barley suggests that polar transport of vesicles is implicated in phytosiderophore secretion in Fe-deficient barley roots"Plant Journal. (in press). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Takahashi, et al.: "Enhanced tolerance of rice to low iron availability in alakaline soils using barley nicotianamine aminotransferase genes"Nature Biotechnology. 19. 466-469 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Higuchi, et al.: "Nicotianamine synthase gene expression differs in barley and rice under Fe-deficient conditions"Plant Journal. 25. 159-168 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Higuchi, et al.: "The expression of a barley HvNAS1 nicotianamine synthase gene promoter-gus fusion gene in transgenic tobacco is induced by Fe-deficiency in roots"Bioscience Biotechnoogyl Biochemistry. 65. 1692-1696 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Higuchi, et al.: "Analysis of transgenic rice containing barley nicotianamine synthase gene"Soil Science and Plant Nutrition. 47. 315-322 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kobayashi et al.: "In-vivo evidence that Ids3 from Hordeum vulgare encodes a dioxygenase deoxymugineic acid to mugineic acid in transgenic rice"Planta. 212. 864-871 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Higuchi et al.: "Nicotianamine synthase gene expression differs in barley and rice under Fe-deficient conditions."Plant Journal. 25. 159-168 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kobayashi et al. : "In-vivo evidence that Ids3 from Hordeum vulgare encodes a dioxygenase that converts 2'-deoxymugineic acid to mugineic acid in transgenic rice."Planta. in press. (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nakanishi et al.: "Two dioxygenase genes, Ids3 and Ids2, from Hordeum vulgare are involved in the biosynthesis of mugineic acid family phytosiderophores."Plant Molecular Biology. 44. 199-207 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Singh et al.: "Ability of ancestral wheat species to secrete MAs in response to Fe deficiency."Journal of Plant Nutrition. 23. 1973-1981 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yamaguchi et al.: "Induction of the IDII gene in Fe-deficient barley roots :"Soil Science and Plant Nutrition. 46. 1-9 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yamaguchi et al.: "Isolation and characterization of IDI2, a new Fe-deficiency induced cDNA from barley roots, which encodes a protein related to the eIF2Ba."Journal of Experimental Botany. 51. 2001-2007 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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