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Study on the Molecular Mechanism to Control the Function of the Yeast Golgi Apparatus

Research Project

Project/Area Number 12460040
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionTHE UNIVERSITY OF TOKYO

Principal Investigator

YODA Koji  Graduate School of Agricultural and Life Sciences, Professor, 大学院・農学生命科学研究科, 教授 (20143406)

Co-Investigator(Kenkyū-buntansha) NODA Yoichi  Graduate School of Agricultural and Life Sciences, Research Associate, 大学院・農学生命科学研究科, 助手 (90282699)
ADACHI Hiroyuki  Graduate School of Agricultural and Life Sciences, Associate Professor, 大学院・農学生命科学研究科, 助教授 (00211699)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥16,300,000 (Direct Cost: ¥16,300,000)
Fiscal Year 2002: ¥4,500,000 (Direct Cost: ¥4,500,000)
Fiscal Year 2001: ¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 2000: ¥7,500,000 (Direct Cost: ¥7,500,000)
KeywordsYeast / Vesicular transport / the Golgi apparatus / membrane proteins / localization mechanism / Sly1 protein / Sed5 protein / Tlg2 protein / Sly1タンパク質 / GDP-mannose輸送体 / GDP-mannoseトランスポーター
Research Abstract

The Golgi apparatus is composed of multiple compartments, where proteins receive specific modification or processing. Therefore, their composition and constitution are important for our understanding of the function of the Golgi.
Sed5 protein in the early compartment is essential for fusion of the transport vesicles and the Golgi. We discovered that Sly1 protein binds to the N-terminus of Sed5 and that this binding stimulates the formation of complex between Sed5 on the Golgi and Bet1 on the transport vesicle. Next we found that Sly1 also stimulates dissociation of the complex because temperature-sensitive sec18 and sly1 mutations are synthetically lethal and the Sed5-Bet1 complex is stable in the sly1 mutant.
We found that the C-terminal hydrophilic region of GDP-mannose transporter (GMT) is important for the localization of GMT in the Golgi. GST-fusion protein containing the GMT C-terminal peptide binds to β-COP subunit of the coatomer. By examining mutant peptides, the number and position of lysine residues are important for the binding and GMT with reduced binding is mislocalized to the vacuole. A dynamic movement of GMT was found by examining temperature-sensitive secretion mutants.
By immunoadsorption using Sed5 and Tlg2, we isolated vesicles derived from the early and late compartments of the Golgi, respectively. We succeeded to identify 40 and 37 membrane proteins in these vesicles. Mannosyltransferases, coat proteins of vesicles, sorting proteins are specific for either vesicles whereas small GTPases are found in both vesicles. Novel membrane proteins, Svp26, Tvp38, Tvp23, Tvp18, Tvp15, and Gvp36 are discovered. Protein-protein interaction was found among Tvp proteins which are evolutionally conserved in the eukaryote.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (31 results)

All Other

All Publications (31 results)

  • [Publications] K.Yoda, T.Kawada, C.Kaibara, A.Fujie, M.Abe, H.Hashimoto, J.Shimizu, N.Tomishige, Y.Noda, M.Yamasaki: "Defect in cell wall integrity of the yeast Saccharomyces cerevisiae caused by a mutation of the GDP-mannose pyrophosphorylase gene VIG9"Bioscience, Biotechnology, and Biochemistry. 64(9). 1937-1941 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K.Yoda, Y.Noda: "Vesicular transport and the Golgi apparatus in yeast"Journal of Bioscience and Bioengineering. 91(1). 1-11 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Y.Kosodo, K.Imai, A.Hirata, Y.Noda, A.Takatsuki, H.Adachi, K.Yoda: "Multicopy suppressors of the sly1 temperature-sensitive mutation in ER-Golgi vesicular transport in Saccharomyces cerevisiae"Yeast. 18(11). 1003-1014 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] H.Kadokura, H.Kawasaki, K.Yoda, M.Yamasaki, K.Kitamoto: "Efficient export of alkaline phosphatase overexpressed from a multicopy plasmid requires degP, a gene encoding a periplasmic protease of Escherichia coli"Journal of General and Applied Microbiology. 47(3). 113-141 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] J.-H.Cho, Y.Noda, H.Adachi, K.Yoda: "A novel membrane protein complex on the endoplasmic reticulum and early Golgi compartments in the yeast Saccharomyces cerevisiae"Bioscience, Biotechnol, and Biochemistry. 65(10). 2226-2232 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] H.Inadome, Y.Noda, H.Adachi, K.Yoda: "A novel protein Mpm1 of the mitochondria of the yeast Saccharomyces cerevisiae"Bioscience, Biotechnol, and Biochemistry. 65(11). 2577-2580 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Y.Kosodo, Y.Noda, H.Adachi, K.Yoda: "Binding of Sly1 to Sed5 enhances formation of the yeast early Golgi SNARE complex"Journal of Cell Science. 115(18). 3683-3961 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K.Imai, T.Kijima, Y.Noda, K.Sutoh, K.Yoda, H.Adachi: "A Rho GDP-dissociation inhibitors is involved in cytokinesis of Dictyostelium"Biochemical and Biophysical Research Communications. 296巻. 305-312 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] H.Hashimoto, M.Abe, A.Hirata, Y.Noda, H.Adachi, K.Yoda: "Progression of the stacked Golgi compartments in the yeast Saccharomyces cerevisiae by overproduction of GDP-mannose transporter"Yeast. 19(16). 1413-1424 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Y.Kosodo, Y.Noda, H.Adachi, K.Yoda: "Cooperation of Sly1/SM-family protein and Sec18/NSF of Saccharomyces cerevisiae in cis-SNARE complex disassembly"Bioscience, Biotechnology, and Biochemistry. 67(2). 448-450 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Koji Yoda, Tsuyoshi Kawada, Chiaki Kaibara, Akihiko Fujie, Masato Abe, Hitoshi Hashimoto, Jiro Shimizu, Nario Tomishige, Yoichi Noda and Makari Yamasaki: "Defect in cell wall integrity of the yeast Saccharomyces cerevisiae caused by a mutation of the GDP-mannose pyrophosphorylase gene VIG9"Biosci. Biotechnol. Biochem.. 64 (9). 1937-1941 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Koji Yoda and Yoichi Noda: "Vesicular transport and the Golgi apparatus in yeast"J. Biosci, Bioeng.. 91 (1). 1-11 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoichi Kosodo, Keita Imai, Aiko Hirata, Yoichi Noda, Akira Takatsuki, Hiroyuki Adachi and Koji Yoda: "Multicopy suppressors of the sly1 temperature-sensitive mutation in ER-Golgi vesicular transport in Saccharomyces cerevisiae"Yeast. 18(11). 1003-1014 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hiroshi Kadokura, Hiroyuki Kawasaki, Koji Yoda, Makari Yamasaki and Katsuhiko Kitamoto.: "Efficient export of alkaline phosphatase overexpressed from a multicopy plasmid requires degP, a gene encoding a periplasmic protease of Escherichia coli"J. Gen. Appl. Microbiol.. 47(3). 113-141 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Jun-Hwa Cho, Yoichi Noda, Hiroyuki Adachi and Koji Yoda: "A novel membrane protein complex on the endoplasmic reticulum and early Golgi compartments in the yeast Saccharomyces cerevisiae"Biosci. Biotechnol. Biochem.. 65 (10). 2226-2232 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hironori Inadome, Yoichi Noda, Hiroyuki Adachi and Koji Yoda.: "A novel protein Mpml of the mitochondria of the yeast Saccharomyces cerevisiae"Biosci. Biotechnol. Biochem.. 65 (11). 2577-2580 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoichi Kosodo, Yoichi Noda, Hiroyuki Adachi and Koji Yoda: "Binding of Sly1 to Sed5 enhances formation of the yeast early Golgi SNARE complex"J. Cell Sci.. 115 (18). 3683-3691 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Keita Imai, Toshirou Kijima, Yoichi Noda, Kazuo Sutoh, Koji Yoda, and Hiroyuki Adachi.: "A Rho GDP-dissociation inhibitors is involved in cytokinesis of Dictyostellum"Biochem. Biophys. Res. Commun.. 296. 305-312 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hitoshi Hashimoto, Masato Abe, Akiko Hirata, Yoichi Noda, Hiroyuki Adachi and Koji Yoda: "Progression of the stacked Golgi compartments in the yeast Saccharomyces cerevisiae by overproduction of GDP-mannose transporter"Yeast. 19(16). 1413-1424 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoichi Kosodo, Yoichi Noda, Hiroyuki Adachi and Koji Yoda: "Cooperation of Sly1/SM-family protein and Sec18/NSF of Saccharomyces cerevisiae in cis-SNARE complex disassembly"Biosci. Biotechnol. Biochem.. 67(2). 448-450 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Y.Kosoda, Y.Noda, H.Adachi, K.Yoda: "Binding of Sly1 to Sed5 enhances formation of the yeast early Golgi SNARE complex"Journal of Cell Science. 115巻・18号. 3683-3961 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Imai, T.Kijima, Y.Noda, K.Sutoh, K.Yoda, H.Adachi: "A Rho GDP-dissociation inhibitors is involved in cytokinesis of Dictyostelium"Biochemical and Biophysical Research Communications. 296巻. 305-312 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] H.Hashimoto, M.Abe, A.Hirata, Y.Noda, H.Adachi, K.Yoda: "Progression of the stacked Golgi compartments in the yeast Saccharomyces cerevisiae by overproduction of GDP-mannose transporter"Yeast. 19巻・16号. 1413-1424 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Y.Kosodo, Y.Noda, H.Adachi, K.Yoda: "Cooperation of Sly1/SM-family protein and Sec18/NSF of Saccharomyces cerevisiae in cis-SNARE complex disassembly"Bioscience, Biotechnology, and Biochemistry. 67巻・2号. 448-450 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Yoda, Y.Noda: "Vesicular transport and the Golgi apparatus in yeast"Journal of Bioscience and Bioengineering. 91(1). 1-11 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Y.Kosodo, K.Imai, A.Hirata, Y.Noda, A.Takatsuki, H.Adachi, K.Yoda: "Multicopy suppressors of the sly1 temperature-sensitive mutation in ER-Golgi vesicular transport in Saccharomyces cerevisiae"Yeast. 18(11). 1003-1014 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Kadokura, H.i Kawasaki, K.Yoda, M.Yamasaki, K.Kitamoto: "Efficient export of alkaline phosphatase overexpressed from a multicopy plasmid requires degP, a gene encoding a periplasmic protease of Escherichia coli"Journal of General and Applied Microbiology. 47(3). 113-141 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] J.-H.Cho, Y.Noda, H.Adachi, K.Yoda: "A novel membrane protein complex on the endoplasmic reticulum and early Golgi compartments in the yeast Saccharomyces cerevisiae"Bioscience, Biotechnol, and Biochemistry. 65(10). 2226-2232 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Inadome, Y.Noda, H.Adachi, K.Yoda: "A novel protein Mpm1 of the mitochondria of the yeast Saccharomyces cerevisiae"Bioscience, Biotechnol, and Biochemistry. 65(11). 2577-2580 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] K.Yoda,T.Kawada,C.Kaibara,A.Fujie,M.Abe,H.Hashimoto,J.Shimizu,N.Tomishige,Y.Noda,and M.Yamasaki: "Defect in cell wall integrity of the yeast Saccharomyces cerevisiae caused by a muntation of the GDP-mannose pyrophosphorylase gene VIG9"Bioscience,Biotechnology,and Biochemistry. 64(9). 1937-1941 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] K.Yoda and Y.Noda: "Vesicular transport and the Golgi apparatus in yeast"Journal of Bioscience and Bioengineering. 91(1). 1-11 (2001)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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