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CONSTRUCTION OF CORE COLLECTION IN SOYBEAN AND ITS APPLICATION TO GENETIC AND BREEDING RESAERCH

Research Project

Project/Area Number 12460142
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 生物資源科学
Research InstitutionHOKKAIDO UNIVERSITY

Principal Investigator

ABE Jun  Hokkaido Univ., Grad. School of Agri., Asso. Prof., 大学院・農学研究科, 助教授 (00192998)

Co-Investigator(Kenkyū-buntansha) KANAZAWA Akira  Hokkaido Univ., Grad. School of Agri., Asso. Prof., 大学院・農学研究科, 助教授 (30281794)
島本 義也  北海道大学, 大学院・農学研究科, 教授 (00001438)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥8,800,000 (Direct Cost: ¥8,800,000)
Fiscal Year 2002: ¥1,600,000 (Direct Cost: ¥1,600,000)
Fiscal Year 2001: ¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 2000: ¥5,400,000 (Direct Cost: ¥5,400,000)
KeywordsSOYBEAN / CORE COLLECTION / GENETIC DIVERSITY / GEMPLASM / STRESS TOLERANCE / 低温耐性 / SSR標識 / 耐冷性 / クロロシス
Research Abstract

The purpose of this study was to evaluate the genetic variation at simple sequence repeat (SSR) loci for wild and cultivated soybeans collected in Asia, and construct the core collection for genetic and breeding researches. A total of 130 cultivars were analyzed for genotypes at 20 SSR loci that were selected from each of 20 linkage groups. Multivariate analyses for genotype profiles revealed two germplasm pools in Asia, which corresponded to the Japanese and Chinese populations. Of the 20 loci, nine informative SSR loci were used to construct a core collection for early-maturing soybean accessions with insensitivity to long day length. A total of 12 accessions was selected as representative accessions in the collection. The same set of SSR loci was also used to evaluate the variation pattern for soybean accessions collected in the northern Thailand, and revealed the similarity of genotype profiles between the collected accessions and released cultivars, suggesting a replacement of landraces by released cultivars, and/or mixtures of those cultivars and landraces. A preliminary study was also carried out to survey the chilling tolerance for a core collection for soybean cultivars with yellow hilum of seeds.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] Xu, Abe, Gai, Shimamoto: "Diversity of chloroplast DNA SSRs in wild and cultivated soybeans : evidence for multiple origins of cultivated soybean"Theor Appl Genet. 105. 645-653 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Abe, Xu, Suzuki, Kanazawa, Shimamoto: "Soybean germplasm pools in Asia revealed by nuclear SSRs"Theor Appl Genet. 106. 445-453 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sakai, Kanazawa, Fujii, Thseng, Abe, Shimamoto: "Phylogenetic relationships of the chloroplast genomes in the genus Glycine inferred from four intergenic spacer sequences"Plant Syst.Evol.. (印刷中). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Abe, Xu, Miyano, Komatsu, Kanazawa, Shimamoto: "Photoperiod-insensitive Japanese soybean landraces differ at two maturity loci"Crop Sci.. (印刷中). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hong, Masuda, Nakano, Abe, Uyeda: "Adaptation of cucumber mosaic virus soybean strains (SSVs) to cultivated and wild soybeans"Theor Appl Genet. (印刷中). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Abe, Han, Komatsu, Shimamoto: "Assignment of the E4 locus into soybean classical linkage group 4"Soybean Genet.Newsl.30. (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Abe J., D. H. Xu, A. Miyano, K. Komatsu, A. Kanazawa, Y. Shimamoto: "Photoperiod-Insensitive Japanese Soybean Landraces Differ At Two Maturity Loci"Crop Sci.. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hong, JS, Masuda C., Nakano M., Abe J., Uyeda I.: "Adaptation of cucumber mosaic virus soybean strains(SSVs)to cultivated and wild soybeans"Theor Appl Genet. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sakai M., A. Kanazawa, A. Fujii, F. S. Thseng, J. Abe, Y. Shimamoto: "Phylogenetic relationships of the chloroplast genomes in the genus Glycine inferred from four intergenic spacer sequences. )"Plant Syst. Evol.. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Abe J., O. K. Han., K. Komatsu, Y. Shimamoto: "Assignment of the E4 locus into soybean classical linkage group 4"Soybean Genet. Newsl.. 30. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Abe J., D. H. Xu, Y. Suzuki, A. Kanazawa, Y. Shimamoto: "Soybean germplasm pools in Asia revealed by nuclear SSRs"Theor Appl Genet. 106. 445-453 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Xu, D. H., J. Abe, AJ. Gai, Y. Shimamoto: "Diversity of chloroplast DNA SSRs in wild and cultivated soybeans : evidence for multiple origins of cultivated soybean"Theor Appl Genet. 105. 645-653 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yang D., T. Nakamura, N. Ohtsubo, K. Takahashi, J. Abe 1, Takahashi, R.: "Seed Coat Craking in soybean isolines for pubescence color and maturity"Crop Sci.. 42. 71-75 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Xu, D. H., J. Abe, A. Kanazawa, Y. Shimamoto, J. Gai: "Identification of sequence variations by PCR-RFLP and its application to the evaluation of cpDNA diversity in wild and cultivated soybeans"Theor Appl Genet. 102. 683-688 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takahashi R., H. Kurosaki, S. Yumoto, O. K. Han, J. Abe: "Genetic and linkage analysis of cleistogamy in soybean"Journal of Heredity. 92. 89-92 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Xu, D. H., J. Abe, M. Sakai, A. Kanazawa, Y. Shimamoto: "Sequence variation of non-coding regions of chloroplast DNA of soybean and related wild species : its implications for the evolution of different chloroplast haplotypes"Theor Appl Genet. 101. 724-732 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Xu, Abe, Gai, Shimamoto: "Diversity of chloroplast DNA SSRs in wild and cultivated soybeans : evidence for multiple origins of cultivated soybean"Theor Appl Genet. 105. 645-653 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Abe, Xu, Suzuki, Kanazawa, Shirnamoto: "Soybean germplasm pools in Asia revealed by nuclear SSRs"Theor Appl Genet. 106. 445-453 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sakai, Kanazawa, Fujii, Thseng, Abe, Shimamoto: "Phylogenetic relationships of the chloroplast genomes in the genus Glycine inferred from four intergenic spacer sequences"Plant Syst. Evol.. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Abe, Xu, Miyano, Komatsu, Kanazawa, Shimamoto: "Photoperiod-insensitive Japanese soybean landraces differ at two maturity loci"Crop Sci.. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hong, Masuda, Nakano, Abe, Uyeda: "Adaptation of cucumber mosaic virus soybean strains (SSVs) to cultivated and wild soybeans"Theor Appl Genet. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Xu.D.H.: "Identification of sequence variations by PCR-RFLP and its application to the evaluation of cpDNA diversity in wild and cultivated soybeans"Theoretical and Applied Genetics. 102. 683-688 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Xu.D.H.: "Diversity of chloroplast DNA SSRs in wild and cultivated soybeans evidence for multiple origins of cultivated soybean"Theoretical and Applied Genetics. 104(印刷中). (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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