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Identification of target genes for chimeric transcription factors in malignant mesenchymal tumors

Research Project

Project/Area Number 12470041
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Pathological medical chemistry
Research InstitutionJapanese Foundation for Cancer Research

Principal Investigator

NAKAMURA Takuro  The Cancer Institute, Department of Carcinogenesis, Head, 癌研究所・発がん研究部, 部長 (00180373)

Co-Investigator(Kenkyū-buntansha) SAIKI Yuriko  The Cancer Institute, Department of Carcinogenesis, Associate, 癌研究所・発がん研究部, 研究員 (80311223)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥15,900,000 (Direct Cost: ¥15,900,000)
Fiscal Year 2002: ¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 2001: ¥4,500,000 (Direct Cost: ¥4,500,000)
Fiscal Year 2000: ¥7,100,000 (Direct Cost: ¥7,100,000)
Keywordschimeric transcription factor / target gene / Ewing sarcoma / clear cell sarcoma / transcriptional regulation / EWS -FLI1 / EWS -ATF1 / DIGR method / 標的遣伝子 / 転写因子
Research Abstract

A number of chimeric transcription factors due to tumor-specific chromosomal translocation have been reported in human sarcomas. In order to understand fundamental function of the chimeric transcription factors we have isolated target genes for EWS-ATF1 and EWS-FLI1 in clear cell sarcoma and Ewing sarcoma, respectively, by using a DNA-protein crosslinking/immunopurification/GFP reporter assay (DIGR). Expression of candidate target genes was examined in original tumor cells, and difference of expression induction by chimeric and wild type transcription factors was compared. We have identified POSH, ATM, ARNT2, GPP34, NKX6.1 and NYD-SP28 as target genes for EWS-ATF1 in clear cell sarcoma. EWS-ATF1 repressed POSH expression while it upregulated the other targets. Endogenous POSH expression was suppressed in the clear cell sarcoma cell line, and induction of POSH brought apoptotic cell death to the same cell, suggesting that repressed expression of POSH in clear cell sarcoma may be relevant to the normal signaling pathway in apoptosis. Moreover, BCAR3, RPS18 and p29 have been identified as EWS-FLI1 targets in Ewing sarcoma, indicating that the DIGR method could be applied to broad range of transcription factors. Recently, we have identified a novel chimera in Ewing Sarcoma with t(4;19) translocation. The chimera consists of the HMG box gene CIC and the double homeobox gene DUX4, and it exemplifies the EWS-ETS independent molecular pathway in Ewing sarcoma.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] Kroon E: "NUP98-HOXA9 expression in hemopoietic stem cells induces chronic and acut myeloid leukemias in mice"EMBO J. 20・3. 350-361 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Fujino T: "Single-translocation and double-chimeric transcripts : detection of NUP98-HOXA9 in myeloidleukemias with HOXA11 or HOXA13breaks of the chromosomal translocation t(7;11)(p15;p15)"Blood. 99・4. 1428-1433 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suzuki A: "t(7;11)(p15;p15) chronic myeloid leukaemia developed into blastic transformation showing a novel NUP98/HOXA11 fusion"Br J Haematol. 116・1. 170-172 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Tsuruyama T: "Constitutive activation of Stat5a by retrovirus integration in early pre-B lymphomas of SL/Kh strain mice"Proc Natl Acad Sci USA. 99・12. 8253-8258 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Jishage M: "Identification of target genes for EWS/ATF-1 chimeric transcription factor"Oncogene. 22・1. 41-48 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Liu P: "Bcl11a signaling is essential for B-and T-cell development"Nat Immunol. (印刷中). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Nakamura, T., Yamazaki, Y., Saiki, Y., Moriyama, M., Largaespada, D.A., Jenkins, N. A. and Copeland, N. G.: "Evi9 encodes anovel zinc finger protein that physically interacts with BCL6, a known human B-cell proto-oncogene."Mol. Cell. Biol.. 20. 3178-318* (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Saiki Y, Yamazaki Y, Yoshida M, Katoh O, Nakamura T.: "Human EVI9, a homologue of the mouse myeloid leukemia gene, is expressed in the hematopoietic progenitors and down-regulated during myeloid differentiation of HL60 cells."Genomics. 70. 387-391 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kroon E, Thorsteinsdottir U, Mayotte N, Nakamura T Sauvageau G.: "NUP98-HOXA9 expression in hemopoietic stem cells induces chronic and acute myeloid leukemias in mice."EMBO J.. 20. 350-361 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Fujino T, Yamazaki Y, Largaespada DA, Jenkins NA, Copeland NG, Nakamura T.: "Inhibition of myeloid differentiation by Hoxa9, Hoxb8 and Meis homeobox genes."Exp. Hematol.. 29. 856-863 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Fujino T, Suzuki A, Ito Y, Ohyashiki K, Hatano Y, Miura I, Nakamura T.: "Single translocation and double chimeric transcripts: Detection of NUP98-HOXA9 in myeloid leukemias with HOXA11 or HOXA13 breaks of the chromosomal translocation t(7;11)(p15;p15)."Blood. 99. 1428-1433 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suzuki A, Ito Y, Sashida G, Honda S, Katagiri T, Fujino T, Nakamura T. Ohyashiki K.: "t(7;11)(p15;p15) chronic myeloid leukemia developed into blastic transformation showing a novel NUP98/HOXA11 fusion."Br. J. Haematol.. 116. 170-172 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Tsuruyama T, Nakamura T. Jin G, Ozeki M, Yamada Y, Hiai H.: "Constitutive activation of Stat5a by retrovirus integration in early pre-B lymphomas of SL/Kh strain mice."Proc. Natl. Acad. Sci.U.S.A.. 99. 8253-8258 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Jishage M, Fujino T, Yamazaki Y, Kuroda H, Nakamura T.: "Identification of target genes for EWS/ATF- 1 chimeric transcription factor."Oncogene. 22. 41-49 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Liu P, Keller JR, Ortiz M, Tessarollo L, Rachel RA, Nakamura T. Jenkins NA, Copeland NG.: "Bel11a is essential for normal lymphoid development."Nat. Immunol.. in press..

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Fujino T: "Single-translocation and double-chimeric transcripts : detection of NUP98-HOXA9 in myeloidleukemias with HOXA11 or HOXA13breaks of the chromosomal translocation t(7 ; 11)(p15 ; p15)"Blood. 99・4. 1428-1433 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Suzuki A: "t(7 ; 11)(p15 ; p15) chronic myeloid leukaemia developed into blastic transformation showing a novel NUP98/HOXA11 fusion"Br J Haematol. 116・1. 170-172 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Tsuruyama T: "Constitutive activation of Stat5a by retrovirus integration in early pre-B lymphomas of SL/Kh strain mice"Proc Natl Acad Sci USA. 99・12. 8253-8258 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Jishage M: "Identification of target genes for EWS/ATF-1 chimeric transcription factor"Oncogene. 22・1. 41-48 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Liu P: "Bcllla signaling is essential for B-and T-cell development"Nat Immunol. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kroon E: "NUP98-HOXA9 expression in hemopoietic stem cells induces chronic and acute myeloid leumkemias in mice"EMBO J.. 20・(3). 350-361 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Fujino T: "Inhibition of myeloid differentiation by Hoxa9, Hoxb8 and Meis homeobox genes"Exp. Hematol. 29・(7). 856-863 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Fujino T: "Single-iranslocation and double-chimeric transcripts : detection of NUP98-HOXA9 in myeloid leukemlas with HOXA11 or HOXA13 breaks of the chromosomal translocation t(7 ; 11)(p15 ; p15)"Blood. 99・(4). 1428-1433 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Suzuki A: "t(7 ; 11)(p15 ; p15) chronic myeloid leukaemia developed into blastic transformation showing a novel NUP98/HOXA11 fusion."Br.J.Haematol.. 116・(1). 170-172 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Nakamura T: "EvI9 encodes a novel zinc finger protein that physically interacts with BCL6, a known human B-cell proto-oncogene product."Mol.Cell.Biol.. 20(9). 3178-3186 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Saiki Y: "Human EVI9, a homologue of the mouse myeloid leukemia gene, is expressed in the hematopoietic progenitors, and down-regulated during myeloid differentiation of HL-60"Genomics. 70(3). 387-391 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kroon E: "NUP98-HOXA9 expression in hemopoietic stem cells induces chronic and acute myeloid leumkemias in mice."EMBO J.. 20(3). 350-361 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Fujino T: "Inhibition of myeloid differentiation by Hoxa9, Hoxb8 and Meis homeobox genes."Exp.Hematol.. (in press). (2001)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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